Candidatus Hodgkinia cicadicola TETUND2: HCTETUND2_144
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Entry
HCTETUND2_144 CDS
T03596
Symbol
trmE
Name
(GenBank) tRNA modification GTPase TrmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
hcd
Candidatus Hodgkinia cicadicola TETUND2
Brite
KEGG Orthology (KO) [BR:
hcd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hcd03016
]
HCTETUND2_144 (trmE)
Transfer RNA biogenesis [BR:
hcd03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
HCTETUND2_144 (trmE)
Prokaryotic type
Methyltransferases
HCTETUND2_144 (trmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TrmE_N
MMR_HSR1
FeoB_N
RsgA_GTPase
SRPRB
Dynamin_N
GlnD_UR_UTase
AAA_23
Motif
Other DBs
NCBI-ProteinID:
AHL31081
LinkDB
All DBs
Position
complement(112452..113666)
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AA seq
404 aa
AA seq
DB search
MEQQSPLARNQSSANTASKRTIFGLASKLPCAIATIRLSGGNTLKTLALTLNKLVCPNRV
CALKIKTHKRAHDSVVTWWPCPRSPTGEDYAEISTTGSIIVVNHITSVLKKLALAQAPRG
EFTRRAITNNKLSVNNAIELAKAFGISCNAQKLKAIATQICKLIVKLEAQSQLGTNSKFK
NHELKSLVSSIEQLRATRSALTCIAGKANTGKSSLFNAITQSKTSIADSSQGTTRDTVRA
RCHGVTWADTAGFKRVENKMELSAMLASLELTERANTILALYAINRKAAFFRCKSFCTVI
QVVSKSDLIHKLKHARDLSFASAYSLEGVTALTQRANHAAKRTPKVNIVQNNVLTQAKAL
ISQCASSKNAVFLIKTLTRAKTALIGALASPIIDKLLSQFCFGK
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
ttggaacagcaaagcccactagcgcggaaccaaagcagcgccaacacagcctcaaaacgc
acaatattcggattagctagcaagctgccgtgtgcaatagccacaattagactgtccggt
ggcaacacactcaagactttagcgctaacgctaaacaagctcgtttgcccaaacagagtt
tgtgcgcttaaaattaagactcacaaaagagcacacgacagcgttgtaacatgatggcct
tgccctcgttcgccaactggcgaagattatgccgagataagcacaacaggctccataata
gtcgttaaccacataacaagtgtgctgaaaaagctggcgctcgctcaagcgccgagagga
gagtttacaaggagggcaataaccaacaacaaactcagcgttaacaacgcaatagagcta
gcgaaggcattcggaataagttgcaacgcgcaaaaactaaaggctatagcaactcaaatc
tgcaagctcattgtgaagttggaagcgcagtctcaactggggactaattctaagttcaaa
aaccacgagttaaaatcgctagtttctagcatcgagcaactgagagctacgcgttcggcg
ctaacgtgcatcgcgggaaaagctaacactggcaagtcttcgcttttcaacgcaataacg
caaagtaaaacctcgatagcagacagctctcagggcacaacaagagacacggttcgcgca
cgctgtcacggcgtaacgtgagcggacaccgccggctttaaacgcgttgaaaacaaaatg
gaattatcagcaatgctggcgtcgctcgagcttactgaacgcgctaacacaatactggcg
ctatacgccattaatcggaaggccgcgttttttagatgcaaatccttttgcaccgtaata
caggttgtgtcgaaatccgatttgattcacaaacttaaacacgctcgcgatctaagcttt
gcgtcagcgtactctttagaaggagtgaccgcgctaacacaacgcgcgaatcacgctgca
aagcggacccctaaagttaacattgttcagaacaatgtgctaacgcaagcaaaagcctta
atatcgcaatgcgcttcgagcaaaaacgctgtgtttttaatcaaaacgctaaccagagcc
aaaactgcgctaattggcgcgctagcctcgccaataatagacaaactactgagccagttc
tgctttggaaaataa
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