Helicobacter cetorum MIT 00-7128: HCW_00390
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Entry
HCW_00390 CDS
T02032
Name
(GenBank) regulatory protein DniR
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
hce
Helicobacter cetorum MIT 00-7128
Brite
KEGG Orthology (KO) [BR:
hce00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hce01011
]
HCW_00390
Enzymes [BR:
hce01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
HCW_00390
Peptidoglycan biosynthesis and degradation proteins [BR:
hce01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
HCW_00390
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Gene cluster
GFIT
Motif
Pfam:
SLT
LysM
LysM3_LYK4_5
LysM3_NFP
HTH_Mga
LysM1_NFP_LYK
Motif
Other DBs
NCBI-ProteinID:
AFI03373
UniProt:
I0EKA4
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All DBs
Position
76830..77978
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AA seq
382 aa
AA seq
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MKYFSKKWFLSVVIGSLALISTSYAEVAFESGINTKILETFGVNASFLAQMPNALKNVNE
EEEWQKLVHRFDSNYQFIPIIKSMLREANVPQEFLFLAMAESRFSTRAYSKKKAVGIWQF
MPETARELRLKVNHYIDERRDPIKSTQAAIVYLKRLYKQTGQWYLVAMAYNYGLRNVQNA
IRKSGSSDIKVLLDENKKYLPKETRDYIRSILSLALRFNSLDNLKNKEYLLNRGARVSLV
GVQLKRHTSLEKVAHNLQLSLKTLKSYNHQFRYNILPSKAPTYTVYIPYEKLALFRQRQF
NQNFRKKTPSIQRQANQSYRHSKNLFLTHVVLPKETLFSIAKRYKVSISSIQLANNLKNF
HITIHQRLLIPLDKKFARNEAF
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgaagtattttagtaaaaaatggtttttgtctgttgttattggctcgcttgcactaatt
tctacaagctatgctgaagtggcatttgaatctggcataaataccaagattttagagact
tttggagtgaatgcaagctttttagcccaaatgccaaatgccctaaaaaatgtgaatgaa
gaggaagaatggcaaaaattagtgcatcgctttgattctaattaccaatttatcccaatc
attaaaagcatgctaagagaggctaatgtgcctcaagaatttttattcctagctatggca
gaatctcgcttttcaacaagggcttatagcaaaaaaaaggctgtaggtatttggcaattt
atgccagaaactgctagagaattacgcctcaaggtcaatcactatattgatgaaagaaga
gaccctatcaaaagcactcaagcagcgattgtctatctcaaaagactctacaaacaaacc
ggacaatggtatttagtagctatggcttataattatggcttacgcaatgtgcaaaacgcc
attagaaaatctggtagctcagatattaaagtcttgctagatgaaaataaaaaatacctc
cccaaagagacacgagactatatccgttctatcttaagtcttgctttaaggtttaatagc
ttagataatcttaagaataaagaatacttgctcaatcgtggagcaagagtgagtttagtt
ggggtgcaacttaaaagacacacttctttagaaaaagtcgctcacaatttacaactaagt
ttaaaaacgctcaaatcttataaccaccaattccgctataatatcctcccctcaaaagcg
cctacctacacggtctatatcccttatgaaaagctcgctctttttagacaacgccaattt
aaccaaaattttagaaaaaagactccttctatccaaaggcaagctaatcagtcctatagg
cattctaaaaatctctttcttacccatgttgttttgcctaaagaaaccttattttctatt
gccaagcgctataaagttagcatttcaagcattcaattagctaataatcttaaaaatttt
catatcactattcatcagcgccttttaatcccccttgataaaaaatttgctcgtaatgag
gctttctaa
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