Helicobacter cetorum MIT 00-7128: HCW_01565
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Entry
HCW_01565 CDS
T02032
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hce
Helicobacter cetorum MIT 00-7128
Pathway
hce03420
Nucleotide excision repair
hce03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hce00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HCW_01565
03430 Mismatch repair
HCW_01565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hce03400
]
HCW_01565
Enzymes [BR:
hce01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HCW_01565
DNA repair and recombination proteins [BR:
hce03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HCW_01565
MMR (mismatch excision repair)
Other MMR factors
HCW_01565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
PcrA_UvrD_tudor
AAA_30
CarD_TRCF_RID
Tup_N
Motif
Other DBs
NCBI-ProteinID:
AFI03598
UniProt:
I0EKX9
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All DBs
Position
307466..309499
Genome browser
AA seq
677 aa
AA seq
DB search
MDFEKSILEGLNEAQKEAVLHTQGPMLILAGAGSGKTKTLTSRLAYLIGALGVPAQNTLT
LTFTNKASLEMRERASNLLENQIIVPPLLCTFHRFGLLFLRQHMHLLKRACDFVLLDADD
TKSLCKQLKISSHRENISKIKNHIIDLETQDKECQKAYAHYTSALEKDNLVDFDDLLALS
FKILKENSSIAQELSEHYNYIMVDEYQDTNRLQFELLELLCCRHDNLCVVGDDDQSIYGW
RGADISNILNFTTHFKNSKLIKLEQNYRSSAEILECANKLIAHNEYRHKKTLISHKGAYK
AVECQEFPTQKEESLNVAYQIKKLLEKGENLEEIAILYRLNGLSRSIEESLNALNIPYRL
VGAVSFYERAEIKDALAFMRLVANKNERFFLRRVINKPTRGIGKKTQDLVLETLEKEQLG
LEEALEKELFVGVLSAKNLQVLKNFVALIKRLREYFEISIEKFCAEFLEETNLMQSYEKE
DNYEERKGFVEELLGLLKEFFKENLESSLLDFLNESALDNVSIQDCGKVSCMSVHMSKGL
EFRRVFVIGLEEGFFPHGSFYKDFDDDNDLEEERRLAYVAITRAKEELHLSYVKERLYFG
RKTPCMPSLFLREAGLMTNDKENLSIRVGDLVQHKVFGTGRVLEIEKGVQNRALKVNFGG
RIQRIMEGFLEKVREGF
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atggattttgaaaaaagtattttagagggactaaacgaggcacaaaaagaagctgtctta
cacacacaaggccctatgcttattttagcaggagctggaagcgggaagactaagacttta
acaagccgtttagcgtatcttattggcgctttgggagtgccagcacaaaataccttaacg
ctaacctttaccaataaggctagtttagaaatgagagaaagagcgagcaatctattggaa
aatcaaatcattgttcctcccttgctttgcacctttcatcgctttgggttattattttta
cgccagcatatgcacttattaaaacgggcatgtgattttgtgttattagatgctgatgat
accaaatcgctttgcaaacagcttaaaatctctagtcatcgtgaaaatatttcaaaaatc
aaaaaccatattattgacttagaaacacaagacaaagaatgtcaaaaagcctatgcccac
tatacaagcgctttagaaaaggataatttggtagattttgatgatttgttagcccttagt
tttaaaatcttaaaagaaaattcttctattgctcaagaattaagcgagcactataattat
attatggttgatgagtatcaagatactaatcgcttgcaatttgagctactagaattattg
tgttgcagacatgataatttgtgtgtagtgggtgatgatgaccaaagcatttatggttgg
agaggggcagatatttctaatattttaaactttactacgcattttaaaaactcaaaattg
attaaattagaacaaaattatcgctcaagtgctgagattttagaatgtgccaataaacta
atcgctcataatgaataccgccataaaaagaccttaattagtcataagggtgcttataag
gccgtggagtgtcaagagtttcctacccaaaaagaagaaagcttgaatgtggcttatcag
attaaaaagcttttagaaaaaggcgagaatttagaagaaatagcgattttatatcgccta
aatggattaagtcgtagtattgaagaaagtttgaatgccttaaatattccttatagatta
gtgggggctgtgagtttttatgaaagagctgaaattaaagacgctctagcttttatgcgt
ttagtagccaataagaatgagcgcttttttttaaggcgtgttatcaataagcctactaga
ggcattgggaaaaaaacgcaagatttggtgctagaaactttagaaaaagagcaactaggt
ttagaagaggcattagaaaaagagctatttgtgggtgtgttgagcgctaaaaatttgcaa
gtcttaaaaaactttgtagctttaattaagcgcttaagagagtattttgaaatttctata
gagaagttttgtgctgaatttttagaagaaactaacttaatgcaaagctatgaaaaagaa
gacaattatgaagaaagaaagggctttgtagaagaattactaggcttattaaaagaattt
tttaaagaaaatttagagagttcgttgctagattttttaaatgaaagcgctttagataat
gtaagcattcaagattgtggcaaagtgagttgcatgagcgtgcatatgagtaagggcttg
gaatttaggcgtgtgtttgtgattggcttagaagagggctttttcccccatgggagtttt
tataaagattttgatgatgacaatgatttagaagaagagcgccgtctagcttatgtcgct
attactagagctaaggaagaactgcacctttcttatgtgaaagagcgcttgtattttggt
agaaagaccccatgcatgccctctttatttttaagagaggcaggacttatgacaaatgat
aaagagaatttatctattagggtgggggatttggttcagcataaggtttttggcacaggg
cgtgtgctagagatagaaaaaggcgtgcaaaatagggctttaaaagtgaattttggaggg
cgtatccaaaggattatggaggggtttttagaaaaagttagggagggattttga
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