Helicobacter cetorum MIT 00-7128: HCW_01660
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Entry
HCW_01660 CDS
T02032
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
hce
Helicobacter cetorum MIT 00-7128
Pathway
hce03030
DNA replication
hce03430
Mismatch repair
hce03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hce00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HCW_01660 (dnaE)
03430 Mismatch repair
HCW_01660 (dnaE)
03440 Homologous recombination
HCW_01660 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hce03032
]
HCW_01660 (dnaE)
03400 DNA repair and recombination proteins [BR:
hce03400
]
HCW_01660 (dnaE)
Enzymes [BR:
hce01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HCW_01660 (dnaE)
DNA replication proteins [BR:
hce03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HCW_01660 (dnaE)
DNA repair and recombination proteins [BR:
hce03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HCW_01660 (dnaE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AFI03617
UniProt:
I0EKZ8
LinkDB
All DBs
Position
330418..334056
Genome browser
AA seq
1212 aa
AA seq
DB search
MNTETKAFTHLHLHTEYSLLDGANKIKVLAKRIKELGMKSVSMTDHGNMFGAIDFYTSMK
KEGIKPIIGMEAYIHNDENLSSKETKQRFHLCLFAKNQEGYENLMYLSSMAYLEGFYYFP
RINKKLLREHSKGIIASSACLQGEVNFHLNTNSERNRKYGAKGYDEAKRIACEYQEIFEE
DFYLEIMRHGILDQRFIDEQVIKMSLETGLKIIATNDTHYTMPSDSKAQEIAMCVAMGKI
MNDKGRLKHSVHEFYIKSLEEMAKLFADIPEALANTQEIAEKCTLEIDLKDDKANPPTPP
SFKFTKTYAQNEGLDFEDDASYFAYKAREGLKERLKLVPEIEHGKYQERLEKEIEVITNM
KFPGYMLIVWDFIRHAKEVGIPVGPGRGSAAGSLVAFALKITNIDPLKYDLLFERFLNPE
RISMPDIDTDFCQRRRREIIEYMIEKYGKYNVAQVITFNKMLAKGVIRDVARVLDMPYKE
ADDFAKLIPNRLGITLKGYEKNGEFVEGAWELEPKIKELVESNDLARQVWEYSLNLENLN
RNAGVHAAALVVDSEKELWHKTPLFASEKTGGIVTQYSMKYLEPVDLIKFDFLGLKTLTV
IDDALKIIKTQHNIDLDFLSLDMDDPKVYKTIQSGDTVGIFQIESGMFQGLNKRLRPSSF
EDIIAIIALGRPGPMESGMVDDFVNRKHGIEPITYAFKDLEPILKPTYGTIVYQEQVMQI
VQTIGGFSLGEADLIRRAMGKKDAQIMADNKAKFVEGAKNLGHDSKKAADLWDLIVKFAG
YGFNKSHSAAYAMITFQTAYLKTYYKHEFMAAMLTSESNKIESVARYIDEVRALEIEVTP
PHVNTSMQDFSVKEFENEKGELEKKIVFGLGAIKGAGGEPIRNIIEERAKGDYKSLEDFI
SRVDFSKITKKSLEPLVKSGSLDNLGYTRKTMLANLDLICDTGRAKDKANEMMQGSNSLF
GAIESEEKEQVVLNMTDLGEHDAKTLLEYEYEILGIHVSGNPLDEFKEEIKGFKNLVKSI
DIEELEIGSQAYLLGKIMEIKKKIGKRSGKPYGTADILDRYGKFELMLFEKQLNALEELD
INKPLVFKCKIEEQEEVARLRLFEILDLESAREVKIPKARYKDPNKEKEDVREIPPIEML
ASSSCSLAIVLENDVKKEFLKQIKESALKHQGKHPLCLIIKDKGKQFKFQSDLLVDESIK
EEFKELEWRDLT
NT seq
3639 nt
NT seq
+upstream
nt +downstream
nt
atgaatacagaaactaaagcattcacacacttgcacttacacaccgaatattcgctttta
gatggagctaataagattaaagtcttagccaaacgcattaaagagctaggcatgaaaagt
gtgagcatgactgaccatgggaatatgtttggagcgattgatttttatacgagcatgaaa
aaagaaggcattaaacccattataggcatggaagcttatattcataatgatgaaaatctt
tctagtaaagagactaaacaacgctttcatttgtgcttgttcgccaaaaatcaagaaggc
tatgaaaacttgatgtatttgagctctatggcatatttagaggggttttattacttccca
cgcattaataaaaagcttttaagagagcattctaagggtattattgcctctagtgcgtgc
ttacaaggcgaagttaattttcatttaaatactaatagtgagagaaatcgcaaatatgga
gctaagggctatgatgaggccaaaagaattgcttgtgaataccaagagatttttgaagag
gatttttatttagagattatgcgtcatggcatattagaccagcgttttattgatgaacaa
gtgattaaaatgtccttagaaacagggctaaaaatcattgccacaaacgacacgcattac
accatgccaagtgattctaaggctcaagagattgcgatgtgtgtggctatgggtaaaatt
atgaatgataaagggcgcttaaaacactctgtgcatgagttttatattaaatcgcttgaa
gaaatggcgaagttattcgctgatattccagaggctctagctaacactcaagaaattgct
gaaaaatgcactttagagattgatttaaaagatgataaagctaaccctccaaccccccca
agctttaaattcaccaaaacttatgcacaaaatgaggggctagattttgaagatgatgct
tcttattttgcttacaaggccagagaagggttaaaagagcgtctaaaattagtgcctgaa
attgagcatggaaaatatcaagagcgtttagaaaaagaaattgaagtcattaccaacatg
aagtttccgggctatatgctaatagtgtgggattttatccgccatgctaaagaagtgggt
attcctgtaggaccgggtagggggagtgcggcgggaagtttagtagcttttgctttaaaa
atcactaatattgaccccttgaaatacgatttgctgtttgaaagatttctaaaccctgaa
agaatcagcatgcctgatattgatacggatttttgtcagcgtaggcgtagagaaatcata
gaatacatgattgaaaagtatggcaaatacaatgtggctcaagtgataacctttaacaag
atgttagctaagggcgtgattagagatgtcgcaagggttttggacatgccctataaggag
gctgatgattttgcaaagctcattcctaatcgcttgggtattacgcttaaaggttatgaa
aaaaatggcgagtttgtggaaggagcgtgggaattagagcctaaaatcaaagaattagta
gagagtaatgacttagccagacaagtatgggagtattcgcttaatctagagaatttaaat
cgtaatgctggcgtgcatgccgccgcattagtggtggatagcgagaaagagctgtggcac
aaaacccctttatttgcatctgaaaaaaccggtggtatcgttacgcaatattctatgaag
tatttagaaccggtggatttgattaagtttgacttcttagggcttaaaaccttgaccgtg
atagatgacgcgcttaaaatcattaaaactcagcataacattgacttagacttcttgtcg
ctagatatggacgaccccaaagtttataaaacgattcagagtggcgacacggtggggata
ttccaaattgaatcgggcatgtttcaagggcttaacaaacgcttaagaccatcaagtttt
gaagatattattgcgataattgcgcttggaagaccagggcctatggaatcaggcatggta
gatgattttgttaatagaaagcatggcattgagcctattacttatgcttttaaagactta
gaaccgattttgaaacccacttatggcacgatagtttatcaagaacaggttatgcaaatt
gttcaaacgattggggggtttagcttgggcgaggcagatttaatccgtcgtgctatgggt
aaaaaagacgctcaaattatggcggacaataaggctaagtttgtagaaggggctaaaaat
ttagggcatgatagtaaaaaggcggctgatttgtgggatttaattgttaaatttgcgggc
tatggttttaacaaatcacactctgcagcttatgctatgataactttccaaacagcgtat
ttaaagacttattacaagcacgaatttatggcagccatgcttacaagcgaatctaataag
attgaatctgtggctagatatattgatgaggttagggctttagaaattgaagttacgccc
cctcatgtaaacacttctatgcaagatttcagtgttaaagaatttgagaatgaaaagggt
gaattagaaaagaaaattgtgtttggattaggagcgattaagggagctgggggtgagcca
attagaaacatcattgaagagagggctaagggggattataagagtttagaagattttatt
tcacgggtggatttttctaaaatcactaaaaaatccttagaacccttagtcaaatcaggg
agcttggataatctaggctacacacgaaaaaccatgctcgctaacttagatttaatctgt
gatacagggcgtgctaaagacaaagctaatgagatgatgcaaggaagcaattcgctcttt
ggggcaatagagagtgaagaaaaagagcaggtcgttttaaatatgactgatttaggcgag
catgatgctaaaacgcttttagaatatgaatatgagattttaggcatccatgtttcaggt
aatcctttagatgaatttaaagaagagattaagggctttaaaaacttagtcaaaagcatt
gatattgaggagttagaaattggctcgcaagcttatttgctcggtaagattatggaaatc
aaaaagaaaattggcaaacgaagcggtaagccttatggcacagcagatattttagacaga
tatggcaaatttgaactcatgctttttgaaaagcaattaaacgccctagaagaattggat
ataaacaaacccttagtatttaaatgcaagattgaagagcaagaagaagtcgcgcgatta
aggctttttgaaatcttggatttagagagtgctagagaagttaaaattccaaaagctcgt
tataaagaccctaataaagaaaaagaagatgtgcgagaaattccacctattgagatgtta
gcgtctagctcttgctccttggcgattgtgttagaaaatgatgtgaaaaaagagttttta
aaacaaatcaaagagagcgctttaaagcatcaaggcaaacaccccttatgcttgattata
aaagataagggcaagcaattcaagtttcaaagtgatttgttggtagatgaaagcattaaa
gaagagtttaaagaattagaatggagagatttaacatga
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integrated database retrieval system
