Helicobacter cetorum MIT 00-7128: HCW_03605
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Entry
HCW_03605 CDS
T02032
Symbol
fliA
Name
(GenBank) flagellar biosynthesis sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
hce
Helicobacter cetorum MIT 00-7128
Pathway
hce02020
Two-component system
hce02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
hce00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HCW_03605 (fliA)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
HCW_03605 (fliA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hce03021
]
HCW_03605 (fliA)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
hce02035
]
HCW_03605 (fliA)
Transcription machinery [BR:
hce03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HCW_03605 (fliA)
Bacterial motility proteins [BR:
hce02035
]
Flagellar system
Flagellar assembly proteins
Stator
HCW_03605 (fliA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
UPF0122
Sigma70_r3
Sigma70_r4_2
DUF3209
MarR
MarR_2
KORA
HTH_10
DUF7440
DUF1492
Motif
Other DBs
NCBI-ProteinID:
AFI04000
UniProt:
I0EM31
LinkDB
All DBs
Position
755440..756195
Genome browser
AA seq
251 aa
AA seq
DB search
MQDFDNFENSEALEKPKNVEKILNAYDKQQHHNQDELALQYLPAVRAMAFRLKERLPSSI
DFNDLVSIGTEELIKLARRYESALNDSFWGYARMRVNGAMLDYLRSLDVVSRSSRKLIKN
IDNETTKYLNEHGIEPNDEYLAQTLGEDIEKIREAKVASDVYALVPIDEQFNAIEQDQIT
KKIETEELLEHVQAILSTMGQREQTLIQLYYFEELNLSEIKEILGITESRISQIIKEVIK
KVRKSLGANHG
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atgcaagactttgataattttgaaaacagcgaggctttagaaaagcctaaaaatgtagag
aaaattctcaatgcttatgacaagcaacaacaccacaatcaagatgaattagccctgcag
tatttaccagcggtgcgtgctatggcatttcgcttaaaagagcgcttgcctagttctatt
gattttaacgatttggtttctattggcactgaagagttaatcaaactagcaaggcgttat
gaaagtgcgcttaatgactctttttggggctatgctagaatgcgagttaatggggcaatg
ctagattatttgcgctctttagatgtggtctctcgttctagtagaaaattgattaaaaat
attgataatgagacaactaaatatcttaatgagcatggaatagagcctaatgatgaatat
ttagcgcaaactttaggtgaagatattgaaaaaattagagaggctaaagtagcttctgat
gtgtatgcactagtgcctatagatgagcaatttaatgcgattgagcaagaccaaatcact
aaaaaaattgagactgaagaattattagagcatgtgcaagccattttaagcaccatgggt
caaagagagcaaactcttatccagctttattattttgaagagttgaatttgagtgagatt
aaagagattttaggcattacagaatcacgcatttctcaaattattaaagaagtgattaaa
aaggtgcgtaagtccttaggagcaaatcatggctga
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integrated database retrieval system
