Helicobacter cetorum MIT 00-7128: HCW_04475
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Entry
HCW_04475 CDS
T02032
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
hce
Helicobacter cetorum MIT 00-7128
Brite
KEGG Orthology (KO) [BR:
hce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hce03032
]
HCW_04475
03400 DNA repair and recombination proteins [BR:
hce03400
]
HCW_04475
Enzymes [BR:
hce01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
HCW_04475
DNA replication proteins [BR:
hce03032
]
Prokaryotic type
DNA Topoisomerases
HCW_04475
DNA repair and recombination proteins [BR:
hce03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HCW_04475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Retrotran_gag_2
Motif
Other DBs
NCBI-ProteinID:
AFI04162
UniProt:
I0EMJ3
LinkDB
All DBs
Position
complement(961287..963773)
Genome browser
AA seq
828 aa
AA seq
DB search
MQDSLIEKDKNIIEVGIDSSIEESYLAYSMSVIIGRALPDARDGLKPVHRRILYAMNELG
LTSKVAYKKSARIVGDVIGKYHPHGDIAVYDALVRMAQDFSMRLELVDGQGNFGSIDGDN
AAAMRYTEARMTKASEEILRDIDKDTIDFVPNYDDTLKEPDILPSRLPNLLVNGANGIAV
GMATSIPPHRIDEIIDALVHVLENPNAELNEILEFVEGPDFPTGGIIYGKAGIIEAYKTG
RGRVKVRAKVHVEKTKNKDIIVLDEMPYQTNKAKLVEQISDLVRDKQIEGISEVRDESDR
EGIRVVIELKRDAMSEIVLNHLYKLTTMETTFSIILLAIYNKEPKIFTLLELLHLFLSHR
KTIVIRRTIFELEKAKARAHILEGYLIALDNIDEIVQLIKTSVSPEVAKNALMERFSLSE
IQSKAILEMRLQRLTGLERDKIKEEYQNLLELIEDLNGILKSEARLNEVVKTELLEVKEQ
FSSKRRTEIQESYENIDIEDLIANEPMVVSMSHKGYVKRVDLKVYERQNRGGKGKLSGST
YEDDFIESFFVANTHDILLFITNKGQLYHLKVYKIPEASRTAMGKAIVNLISLAPDEKIM
ATLSTKDFSDERSLAFFTKNGVVKRTNLSEFGSNRSYSGIKAINLDEDDELVTAKIVDKN
SKHLLIASHSGTFIKFPLEDVREIGRVSRGVRGIRLAENDFVVGAVVVCDDNNKLLSVSE
NGLGKQTLAESYREQSRGGKGVIGMKLTKKSGNLVGIISVDDENLDLMILTASAKMIRVS
IKDIRETGRNASGVKLIDTADKVVYVNSCPKEEDNEITETSDSQSLFD
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atgcaagatagcttgattgagaaagacaaaaatattatagaagtaggaattgattcttct
attgaagagagttatttagcttattctatgagtgttatcattgggcgtgccttacctgat
gctagagatggcttaaagcctgttcataggcgtattttatatgcgatgaacgagctaggt
ctcacttctaaagtcgcttacaaaaagagtgctaggattgtgggtgatgttatcggtaaa
taccacccccatggcgatattgctgtttatgatgccctagttagaatggcacaagatttt
tctatgcgtttagaattagtcgatgggcaaggaaactttggctctattgatggcgataat
gccgctgctatgcgttataccgaggctcgcatgaccaaagcgagtgaagaaattttaaga
gatattgacaaagacaccatagattttgtgcctaactatgatgataccttaaaagagcct
gatattttaccaagccgtctgcctaatctcttagtcaatggggctaatggtattgcagta
ggtatggctacttctataccaccgcatagaattgatgaaatcatagacgctttagtgcat
gtgttagaaaaccctaacgctgaattgaatgaaattttagaatttgttgaagggccagac
tttcctaccggcggaatcatctatggcaaggcgggtattattgaagcctataaaacaggg
cgtgggcgtgtgaaagttagagccaaagtgcatgtggaaaagactaaaaataaagacatc
attgttttagatgaaatgccctatcaaaccaataaagctaaattagtagaacaaatcagc
gatttagtgcgagacaaacaaattgaaggcatttctgaagtgcgtgatgaatctgataga
gaaggcattagagtggtgattgagttaaaaagagatgcgatgagtgaaattgtcttaaac
catctctacaaactcaccacaatggagaccacttttagcattatcctactcgctatttac
aataaagagcctaagattttcacacttttagaactcttacaccttttcttaagccataga
aaaaccatagttatcagacgcaccatatttgaattagaaaaggccaaagcacgagctcat
attttagaaggttatttgattgccctagacaatattgatgaaatcgtgcaactcattaaa
actagtgttagccccgaagtggctaaaaacgctttaatggagcgttttagtttgagcgaa
attcaaagcaaagccatattggaaatgcgtttgcaacgcttaaccggacttgagagagat
aaaatcaaagaagaatatcagaatttactagagctgattgaagatttaaacggcatttta
aagagtgaagcccgcctaaatgaagtcgtaaaaacagagcttttagaagtcaaagagcag
ttttcttctaaaagacgcaccgaaattcaagaatcctatgaaaatattgatatagaagat
ttaatcgctaatgagcctatggtggtgagtatgagccataaaggctatgttaaaagagtg
gatttaaaagtctatgagagacaaaatcgtggcggtaagggcaagctatctggtagcact
tatgaagatgattttattgagagcttttttgtggctaacacgcatgatatcttgctcttt
atcactaataaaggtcagttgtatcatttgaaagtctataaaatcccagaagctagcaga
accgctatgggtaaagccatagttaatttaatctcattagctccagatgaaaagattatg
gcaactttaagcaccaaagattttagcgatgaacgctctttagcctttttcactaaaaat
ggtgtcgtaaaacgcacgaatttaagcgagtttggtagtaatagaagttatagtggtatc
aaagcgattaatttagatgaagatgatgagttagtaaccgcaaaaattgtggataaaaac
tccaagcatttacttatcgcttcacattctggcacttttattaaattccctttagaagat
gtgagagaaatcgggcgagtgagtcgtggggttaggggcataagacttgctgaaaatgat
tttgttgtgggtgcagttgttgtttgtgatgataataacaagcttttaagcgtgagtgaa
aacggactaggtaagcaaaccttagcggagtcttatagagagcaatctcgtgggggtaag
ggtgtgattggtatgaaactcactaaaaagagcggcaatttagtgggtattattagcgta
gatgatgagaacctagatttaatgatactcactgcaagcgcgaaaatgattagggtttct
atcaaagatattagagagaccggaagaaatgctagtggggtgaaactcatagacaccgct
gataaggtcgtgtatgtcaattcttgccctaaagaagaagataatgagattactgaaact
tcagattctcaaagcttgtttgactaa
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