Helicobacter cetorum MIT 00-7128: HCW_05140
Help
Entry
HCW_05140 CDS
T02032
Name
(GenBank) recombination and DNA strand exchange inhibitor protein
KO
K07456
DNA mismatch repair protein MutS2
Organism
hce
Helicobacter cetorum MIT 00-7128
Pathway
hce03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hce00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
HCW_05140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hce03400
]
HCW_05140
DNA repair and recombination proteins [BR:
hce03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
HCW_05140
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smr
MutS_V
FAM184
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AFI04293
UniProt:
I0EMX4
LinkDB
All DBs
Position
complement(1103889..1106135)
Genome browser
AA seq
748 aa
AA seq
DB search
MNTSQKPLEESLDLKEFLALFKTFFAKESGITLENDLKQAFTYLNEVDTIGLPTPKSVRE
SELIFVKLAKFGTLHLDEIDEIVKRLRYIVILKNTFKNFTHLKFYERLNAIILPAFFDDL
MHMLDDEGRIKEGANATLDALNESLNRLKKESAKIIQNYAHSKELAPYLVDTQSHLKHGY
ECLLLKSGFSSAIKGVVLERSSNGYFYLLPENAQKITQKITQVHNEIESCTLEICQTLSN
SLQKHLLFLKFIFKEFDFLDSLQARLNFAKEYNLEFVMPSFTQKKLILENFSHPILKEPK
PLNLKFEKSMLAVTGVNAGGKTMLLKSLLSAAFLSKYLIPMKINANKSVIPYFKEIHAII
NDPQNSANNISTFAGRMKQFSTLLSQENMLLGVDEIELGTDADEASSLYKTLLEKLLKQN
NKIIITTHHKRLSVLMAENKEVELLAALYDEEKERPTYTFLKGVIGKSYAFETALRYGVP
HFLIKDAKAFYGEDKERLNVLIENSSTLERELKQKNESLENALKEQENLKNAWLLEVEKQ
KEMFQKKKLELEKSYQQALNLLKSEVALKNTSSMHKEIQKANEILNQHKKSFEKEKNITS
FQVHEKARYKNESVLIIQTLDKGYYSIETELGMRLKVHGSLLKKIQKPQNKIKQNKIKPT
PTIIPKPKEASLRIDLRGQRTEEALDLLDAFLNNALLGGFEEVLICHGKGSGILEKFVKE
FLKKHPKVSSFSDAPINLGGSGVKIVKL
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atgaatacttcacaaaaacccctagaagaaagcctagatttaaaagagtttctcgctctt
tttaaaactttttttgcaaaagaaagtggtattactttagaaaatgatttgaaacaagct
ttcacttacttaaatgaagtggatacgattggcttacctaccccaaaaagtgtgagagag
agtgagcttatttttgtcaaactcgctaagtttggcacactccatttagatgaaattgat
gagattgtcaaaagattgcgctacatcgtcattctaaaaaatacttttaaaaatttcacg
catttaaaattttatgaacgccttaacgctattattctacccgctttttttgatgattta
atgcacatgcttgatgatgaaggcagaattaaagaaggggctaatgccacgctagatgct
ttaaatgagagcttaaatcgccttaaaaaagagagtgcaaaaatcattcaaaattacgcc
cattctaaagagcttgccccttatttagtggatactcaaagccaccttaagcatggctat
gaatgccttttattaaagagtgggttttctagtgcgattaaaggcgttgtgctagaaaga
agtagcaatggttatttttatctcttgcctgaaaacgctcaaaaaatcacgcaaaaaatc
acgcaagttcataacgaaatagaaagttgcacccttgaaatttgtcaaactttaagtaat
agcctacaaaaacaccttttatttttaaaattcattttcaaagaatttgactttttagat
agcttacaagctcggctaaattttgctaaagaatataatttagaatttgtcatgccaagt
tttacgcaaaaaaaattgattttagaaaacttttcacaccccattctaaaagagccaaag
cccctaaacttgaagtttgaaaaatccatgctcgctgtaacaggcgtgaatgctggcgga
aaaaccatgcttttaaaatcgcttttaagcgcggcttttttaagcaagtatctcattcct
atgaaaattaatgctaacaagtctgttatcccttattttaaagaaattcacgccattatt
aatgacccccaaaatagtgcgaacaatatctctacttttgctggcagaatgaagcaattt
agcactcttttatcccaagagaacatgctcttaggcgttgatgaaattgagctaggaacc
gatgctgatgaagcaagcagtttgtataaaaccttgctagaaaagttgctcaaacaaaac
aataaaatcattattaccacacaccacaaacgcctaagcgttttaatggcagagaataaa
gaagtggaattactagccgctctttatgatgaagaaaaagaacgccccacttacaccttt
ttgaaaggtgttataggcaaaagctatgcgtttgaaacagctcttcgctatggtgtgcca
cactttttaattaaagatgctaaggcattttatggcgaagataaagaaagattaaatgtt
ttgattgaaaattcaagcacattagaaagagagctgaaacaaaaaaatgagagcttagag
aacgccttaaaagagcaagaaaatctgaaaaacgcatggcttttagaagttgaaaaacaa
aaagaaatgtttcaaaagaaaaaacttgaattagaaaaatcctatcaacaagccttaaat
ttattaaaaagtgaagtcgctttaaaaaataccagctctatgcataaagaaatccaaaaa
gctaacgagattttaaaccagcataagaagagctttgaaaaagaaaaaaatataacgagt
tttcaagtgcatgaaaaagcacgctataaaaatgaaagcgtgctcattattcaaacgcta
gataaaggctattactccatagaaacagagcttggcatgcgtttgaaagtgcatggaagt
ttattaaaaaaaattcaaaaaccccaaaataagattaagcaaaacaagattaaaccaacc
ccaacgattattcctaagcccaaagaggcgagcttacgcattgatttaaggggacaacgc
actgaagaagctttggatttactagacgcctttttaaataacgctcttttagggggcttt
gaagaagtgctaatctgtcatggtaaaggaagtgggattttagaaaaatttgtgaaagaa
tttttgaaaaaacaccccaaggttagtagctttagcgatgcccctataaatttaggcggt
agtggggttaaaatcgttaaattatga
DBGET
integrated database retrieval system
