KEGG   Helicobacter cetorum MIT 00-7128: HCW_07150
Entry
HCW_07150         CDS       T02032                                 
Name
(GenBank) CRISPR-associated RAMP Csm5 family protein
  KO
K19140  CRISPR-associated protein Csm5
Organism
hce  Helicobacter cetorum MIT 00-7128
Brite
KEGG Orthology (KO) [BR:hce00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:hce02048]
    HCW_07150
Prokaryotic defense system [BR:hce02048]
 CRISPR-Cas system
  Type III CRISPR-Cas system
   Subtype III-A factors
    HCW_07150
SSDB
Motif
Pfam: RAMPs DUF6825
Other DBs
NCBI-ProteinID: AFI04688
UniProt: I0EP19
LinkDB
Position
1557657..1558844
AA seq 395 aa
MPNKAHKTIYKYKVSVLSPIHIGSGNSFELNYNMFYKNNSLYLCDEFKLMDYFLTKNPKL
EYFEKEKMLLKFTEFIKNSKEIPFIRKIENNFILRNKPLLEHISSQVIKDNQILSLPYIP
GSSIKGGLRTAILNGIVPGKENNKIIFNQTRNSDCQKIFNALDNKKFFKNNSLNKDRFKP
NDEDFINVFKDLYISDSQSLKTKVYQSINMKKLKDHQDKRKNGNIERCKNFLECIIPEQT
FEITITDKNSNKIFENLDNICTDFYKKWFEEEDYYFLDKDNKKEKDSKEEKDENKKNEYY
NFLNKEQWSIIKEKVEKTKNGFLLNVGRFSGAERKTLNDYRRIQNSKAFNKDNKKDTSTT
SARTYVLSSPKEVTNEKFYTNKLLPFGWLLFEKIN
NT seq 1188 nt   +upstreamnt  +downstreamnt
atgcccaacaaagctcataaaacaatctataaatacaaagtgagtgtgctaagccccatt
catattggcagcggaaattcatttgaattaaactataacatgttctataaaaataattcc
ctttatctttgtgatgaatttaaacttatggattattttctaaccaaaaaccctaaacta
gaatattttgaaaaagaaaaaatgcttttgaagttcacagagtttattaaaaatagcaaa
gaaataccttttattagaaaaatagaaaataattttattttaagaaataagcccttattg
gaacacatttcttcacaagttattaaagataatcaaatattatctttgccatacattcct
ggaagtagtatcaaaggaggtctaagaacagccattttaaatggcattgttcctggaaaa
gaaaacaataaaatcattttcaatcaaacacgcaatagtgattgccaaaaaatctttaac
gcattagataataaaaaattttttaaaaataattctttaaataaagataggtttaagcct
aatgatgaagattttattaatgtttttaaagacttatatatctctgatagtcaaagctta
aaaactaaagtctatcaatctatcaatatgaaaaagctaaaagaccaccaagataaaaga
aaaaatggaaatatagaaagatgtaaaaattttcttgagtgtatcataccagagcaaact
tttgaaattactatcacagataaaaactcaaacaaaatttttgaaaacttggacaatatc
tgcactgatttttacaaaaaatggtttgaggaagaagattactattttttagacaaagat
aacaaaaaagaaaaagacagcaaagaagaaaaagatgagaataaaaaaaacgaatattat
aattttctaaataaagagcaatggagcataatcaaagaaaaagtggaaaaaacaaaaaat
ggctttttgcttaatgtaggtagattttcaggggcagaaagaaaaacgctaaatgattat
aggcgaattcaaaattctaaggcattcaacaaagataacaaaaaagacacaagcaccaca
agtgctagaacttatgttttaagttctccaaaagaagtaactaacgaaaaattttataca
aataaacttttgccttttggatggctcttatttgaaaaaatcaattag

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