Hymenobacter cellulosivorans: MUN80_00070
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Entry
MUN80_00070 CDS
T09419
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
hcf
Hymenobacter cellulosivorans
Pathway
hcf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hcf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MUN80_00070 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hcf03019
]
MUN80_00070 (recQ)
03400 DNA repair and recombination proteins [BR:
hcf03400
]
MUN80_00070 (recQ)
Enzymes [BR:
hcf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MUN80_00070 (recQ)
Messenger RNA biogenesis [BR:
hcf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MUN80_00070 (recQ)
DNA repair and recombination proteins [BR:
hcf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MUN80_00070 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RQC
RecQ-1-like_HTH
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
HTH_40
3HCDH_N
Motif
Other DBs
NCBI-ProteinID:
UOQ53172
LinkDB
All DBs
Position
15024..17219
Genome browser
AA seq
731 aa
AA seq
DB search
MPAVKQAVKREADLKGKLKEVFGYGQFRGTQEAIIQNVIEGNNTFVIMPTGAGKSLCYQL
PALILPGTAIVISPLIALMKNQVDQLNAFGVNAQFLNSTLSKSETNRVKKDVISGEVKLL
YVAPESLTKEETIDFLQKATISFVAIDEAHCISEWGHDFRPEYRRIRGIIDNIGQVPIIA
LTATATPKVQLDIQKNLQMDEASVFKTSFNRTNLYYEVRPKHNTKKQLIQYVKQHKGKAG
IVYCLSRKKVEEIAELLRVNDVKALPYHAGLDPHVRMANQDAFLNEEADVIVATIAFGMG
IDKPDVRFVIHYDTPKSIEGYYQETGRGGRDGLEGNCLMFYSYDDIVKLEKFNKDKPVTE
RDNSKLLLQEMANYADSAVCRRKQLLHYFGEHFEKDCGFCDNCKHPKERFEAKDEVLMAL
KAVVQTEERFGIEHIGTVLMGMNNAHVESYGHNALPIYGVGKDHDAAFWHSLLRQALLNG
FLEKDIENFGVVKICPKGLDFIENPHSIKLTKDHNYEEEVKEEQEKEEVQEAAGHDAALF
EMLKSLRKKIAKEKNLPPYVLFQDPSLKEMATTFPTKMDDLAHVGGVGLGKAQKFGQPFL
ALIQKYVDENDIVTAADVVVKSAVNKSKIKIYIIQQIDKKMDLEEIAASKGIDMRELMEE
IEHICYSGTKLNLDYYIDGVLDQDRQEEITDYFLQASTDNIAVALKELGPDDYTEEDLRL
MRIKFLSEYAN
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgccagcggtaaaacaagcagtcaagcgtgaggctgatctgaaaggcaagttaaaggaa
gtttttgggtacggtcagtttcgcggcacccaggaagccatcattcagaacgtcatcgag
ggcaacaacaccttcgtgattatgccgactggcgctggtaagtcgctgtgctaccagctg
cccgcgttgattctgcccggcacggctatcgttatttctcccctgattgccctgatgaaa
aatcaggtggatcagctcaacgctttcggggtaaatgcccagtttctgaactcgaccttg
tcgaagtcggagacgaaccgggtgaaaaaggacgtcattagtggggaagtaaagctgctg
tatgtggcgcccgaaagcctgaccaaggaagaaaccatcgacttcctgcagaaggccacc
atcagcttcgtggctatcgacgaggctcactgcatctcggagtggggccacgacttccgc
cccgagtaccgccgcatccgaggcatcatcgacaatatcggccaagtaccgattattgcc
ctcacggccacggctacgcccaaggtgcagctcgacatccagaaaaacctgcagatggat
gaggcttcggtgttcaagacctcgtttaaccgcaccaacctctattacgaggtgcggccc
aagcacaacaccaaaaagcagctgattcagtacgtgaaacagcacaagggcaaagccggc
atcgtgtactgcctctcgcgcaagaaggtggaggaaattgccgagctgctacgcgtcaac
gacgtgaaggccctgccctaccacgccggcctcgacccccacgtgcgcatggccaaccag
gacgccttcctgaatgaagaagccgacgtgattgtggctaccattgccttcggcatgggc
atcgacaagcccgacgtgcgcttcgtgattcactacgatacgcctaagtccatcgaaggc
tactaccaagaaaccggccgcggcggccgcgacggcctggaaggcaactgcctgatgttc
tacagctacgacgacatcgtcaagctggagaagttcaacaaggacaagccagtgaccgag
cgcgacaactccaagctgctgctccaggaaatggctaactacgccgactcggcggtgtgc
cggcgcaagcagctgctgcactacttcggcgagcatttcgagaaggattgcggcttctgc
gacaactgcaagcaccccaaggagcgtttcgaagccaaggacgaagtactgatggccctc
aaggccgtggtgcaaaccgaggagcgcttcggcattgagcacattggcacggtactcatg
ggcatgaacaacgcccacgtagaaagctacggccacaatgccctacccatttatggggtg
ggcaaggaccacgacgcggccttctggcactcgctcttgcgacaggccttgctcaatggc
ttcctggaaaaggatattgagaacttcggcgtggtgaaaatctgtccgaaaggcttagat
ttcattgagaatccgcattctatcaaactcaccaaggaccataactacgaggaagaggtg
aaagaagagcaagaaaaagaggaagtccaggaagccgccggccacgacgccgcccttttt
gagatgctgaaatccttgcgcaagaagatagccaaggaaaagaacctgcccccctatgtg
ctgtttcaggacccgagcctgaaggaaatggccacgaccttccccaccaagatggacgac
ctcgcccacgtgggcggcgtgggcctgggcaaggcgcagaaatttggccagcccttcctg
gcgctgattcagaaatacgtcgacgaaaacgacatcgtgacggctgccgacgtggtggtc
aagtccgccgtcaataagtcgaagatcaagatctacatcattcagcagattgataagaag
atggacctggaggaaattgctgcctccaagggcatcgacatgcgcgagctgatggaggaa
atcgagcacatctgctactccggtaccaagctcaacctcgactattatatcgacggggta
ttggaccaggaccggcaggaggaaatcaccgactacttcctgcaggccagcaccgacaat
attgccgtggccctcaaggaactcggtcccgacgactacaccgaggaagacctgcgcctg
atgcgcatcaagttcttgagcgaatacgctaactag
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