Hymenobacter cellulosivorans: MUN80_05930
Help
Entry
MUN80_05930 CDS
T09419
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
hcf
Hymenobacter cellulosivorans
Pathway
hcf02020
Two-component system
hcf02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
hcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
MUN80_05930 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
MUN80_05930 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hcf03021
]
MUN80_05930 (rpoN)
Transcription machinery [BR:
hcf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MUN80_05930 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_CBD
Sigma54_DBD
Sigma54_AID
SF3b1
HTH_12
LacI
Thioredoxin_4
Phage_GPL
Motif
Other DBs
NCBI-ProteinID:
UOQ54294
UniProt:
A0ABY4FCA6
LinkDB
All DBs
Position
complement(1385054..1386640)
Genome browser
AA seq
528 aa
AA seq
DB search
MQRLDMKQLLSQKLSPQQIQFIKLLQIPTAELEARIKEELEVNPALEEGDENTDDELEDQ
ERDDDDSDDADDYDDPDSEFDNDDNTLDEDFDAGSEEQPEIEVPTKEEDPVEAPKDNEEL
DLGDYLNDDEIAGYKMQGDGPGEPEDDREMPLADTGASLTDALLDQLGFADLDEKQESIG
RQLIGSIDNDGYIRRDLSAIANDLAFSQNIEADEAEIEGVLHVIQSFDPAGIAARDLQEC
LLLQLERRHQDEVTEHAERILSETFDEFTKKHYQRIQQKLDLEDDELKEAIALILKLNPK
PGGTGPVGMGKVQYIIPDFILTNDNGVFNLTLNARNAPDLRVAPAYTEMFQTYDKAAKKD
KKMKEAVTFVKQKLDSARWFIDAIKQRQQTLLRTMDSIVRYQHDFFLEGDESKLRPMILK
DIATEIGMDISTVSRVANSKSVQTEFGIYPLKYFFSEGIATDSGEDASSREVKHILKEII
EGEQKNKPLSDDKLEKMLNARGYNIARRTVAKYREQLNIPVARLRKEL
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagacttgacatgaagcagcttctctcccagaagctgtctccccaacagatacag
ttcattaagctgctgcaaatcccgacagcagagctggaggcgcgcatcaaggaagagctg
gaagtaaacccggccctggaggaaggcgacgaaaacaccgacgacgagctggaagaccag
gagcgcgacgacgatgattcggatgacgccgacgactacgatgaccccgactccgagttt
gacaacgacgacaacaccctggacgaggacttcgacgcgggcagtgaggaacagcccgaa
atagaagtcccgaccaaggaggaggacccggttgaggcacccaaggacaacgaagagcta
gacctgggcgactacctcaacgacgacgaaatagcgggctacaagatgcagggcgacggg
cccggcgagcccgaagacgaccgggaaatgcccctggccgataccggtgcctctctcacc
gacgccctactcgaccagctaggctttgctgacctcgacgaaaagcaggaatccatcggc
cgccagctgattggctccatcgacaacgacggctacatccgccgcgacttgtcggccatt
gccaacgacttggccttttcccagaacattgaggccgacgaagccgaaattgagggcgta
ctgcacgttattcagagcttcgacccggccggtattgccgcccgcgacctgcaggagtgc
ctcttgctgcagctggagcgccgccaccaggacgaagtaaccgagcacgccgagcggatt
ctgagtgaaacgttcgatgagtttaccaagaagcactaccagcgaattcagcagaagctg
gatttggaagacgatgagctcaaggaagccattgccctgattctgaagctcaaccccaag
cccggtggcacaggcccagtgggcatgggcaaggtgcagtacatcattcccgattttatc
ctgaccaacgacaatggtgtgttcaacctcacgctgaacgcgcgcaacgctccggacttg
cgggtggccccggcctacaccgagatgttccagacctacgacaaggcggccaagaaggac
aagaagatgaaggaggccgtgacgttcgtcaagcagaagctcgactcggcccgctggttt
attgatgccatcaagcagcgccagcaaaccttgctccgcaccatggattccatcgtacgc
tatcagcacgacttcttcctcgagggcgacgagagcaagctacgacccatgattctgaag
gatattgctaccgaaatcggtatggacatcagtactgtgagccgggtagccaactccaag
tcggtccagacggaattcggtatttacccgctcaagtactttttctccgagggcattgcc
accgactcgggcgaggacgccagctcgcgggaagtgaagcacattctgaaggaaatcatt
gagggtgaacagaaaaacaaacccttgagcgacgacaagctggaaaaaatgctcaacgcc
cgcggctacaacattgctcgccgcaccgtggctaagtaccgggagcagctcaatattccg
gtggcccgcctgcgcaaggagctgtag
DBGET
integrated database retrieval system
