Hymenobacter cellulosivorans: MUN80_15865
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Entry
MUN80_15865 CDS
T09419
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
hcf
Hymenobacter cellulosivorans
Brite
KEGG Orthology (KO) [BR:
hcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hcf03032
]
MUN80_15865 (topA)
03400 DNA repair and recombination proteins [BR:
hcf03400
]
MUN80_15865 (topA)
Enzymes [BR:
hcf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
MUN80_15865 (topA)
DNA replication proteins [BR:
hcf03032
]
Prokaryotic type
DNA Topoisomerases
MUN80_15865 (topA)
DNA repair and recombination proteins [BR:
hcf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MUN80_15865 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
PadR
Motif
Other DBs
NCBI-ProteinID:
UOQ51235
LinkDB
All DBs
Position
complement(3782316..3784799)
Genome browser
AA seq
827 aa
AA seq
DB search
MVKNLVIVESPAKAKTIEGYLGKDFIVKSSFGHVRDLPKDNNAIDITNGFKPTYVVSPDK
REIISQLKKLAKEAEMVWLASDDDREGEAISWHLSETLNLSEAKTRRIVFREITKNAILN
AINNPREIDLNLVNAQQARRVLDRLVGFELSPVLWKKVKTGLSAGRVQSVAVRFVVERER
EINQHKSSSAYRVTARFDAGRGTVLEAELPTRFKTQQEAQEFLTRCIGATYRIENLEKKP
GKRSPAPPFTTSTLQQEASRKLGFSVAQTMSVAQKLYEAGKISYMRTDSVNLSQDALAAA
KAEISSTYGPEYAHTRHFKTKSASAQEAHEAIRPTDFALVKAGSDSAEQRLYDLIRKRAM
ASQMADATIERTVATIGISTQPGTPLTATGEVITFEGFLKAYSESKDEETLDEETSTESS
FSRGLPPLNVGQELPLQLLRATERYSSPPARYTEASLVKKLEEMGIGRPSTYAPTISTIQ
KRGYVEKDTREGKERKFHVLTLDGDQVKTEAKTETFGADKAKLFPTDTAMVVNDFLVEHF
PIIIDYQFTAKVEGEFDQIANGQEQWGKMLADFYGTFHETIERGQDIERSTLGSTREIGI
HPETGQKLTARLGRYGPYVQIEPKEGAPEGEKAVYASLRKGQFIESITLEEALDLFKLPR
IVGQFEDKDMTAALGRFGPYIRHDSKFYSLTKEQDPHTITAQEAIDLIEAKRKADAERLI
KDFPGREDVQVLNGRFGPYIVVGKKNVKIPKGEEPMELTLERCLELAEATPDKPAKGGRF
AKKAAPAAEDTADKPAKKKPAAKAPAKKAAGTAAKKPAAKKPTAKAK
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atggtcaaaaatctagtcatcgtagagtccccagccaaagccaaaaccattgagggttac
ttgggcaaggactttatcgtcaaatccagcttcggccacgtccgcgacctgcccaaggat
aataatgccattgacattaccaatggatttaagccgacctacgtcgtgtcgcccgacaag
cgggaaatcatttcccagctgaagaagttggcgaaggaggccgaaatggtctggttggcg
agtgacgatgaccgcgagggtgaggccatcagctggcacctgtcggaaacgctgaacctg
agcgaggccaaaacccggcgcatcgtatttcgggaaattaccaagaacgccattctcaac
gccattaataatccccgggaaattgacttgaacctggtaaacgcccagcaagcgcgacgc
gtgctcgaccgattagtgggctttgagctgagcccggtgctgtggaaaaaagtaaaaacc
ggcttgtcggcgggacgggtacagtcggtggcagttcggtttgtagtagagcgggaacga
gaaataaatcagcacaaatcgtcgtcggcgtaccgcgtaacggcgcgctttgatgcaggt
cgggggacggtgctggaggccgagttgccgacgcgcttcaaaacgcagcaggaagcccag
gaatttctgacccgctgcattggggccacttaccggattgagaatctggaaaagaaaccg
ggcaagcgcagtcccgcaccacctttcaccacctctactctacaacaggaagcctcgcgc
aagctgggcttctcggtagcgcagaccatgagcgtggcccaaaagctctacgaggccggt
aagatcagctacatgcggactgactcggtaaacctctcgcaggacgcactggccgccgct
aaagccgaaatcagttcgacgtacggcccggagtacgcccacacccgccacttcaagacc
aaatcagcctcggcccaggaagcccacgaagccatccgccccacggactttgcgctggtc
aaagccggttccgactcagccgagcagcgcctctacgatttgatccgcaagcgggctatg
gcctcgcagatggccgatgccactattgagcggaccgtagccacaattggtatcagcacc
cagcctggcacgccgctcacggccacgggcgaagtcattacgtttgagggctttttgaaa
gcttacagcgagtcgaaggacgaggaaaccctggacgaagaaacaagcaccgagtcgtcg
ttttcgcggggcttgccaccgctgaacgtgggccaggagctgcccctgcagctgctgcgc
gcaaccgagcggtattcttcgccgccggcccgttacacagaagcttcgctggtgaaaaag
ctggaggaaatgggcatcgggcgcccgtcgacctacgcgccgaccatcagcacgattcag
aagcggggctacgtggaaaaagacacccgggaaggcaaggaacgcaagtttcacgtgctg
actctggacggggaccaggtgaaaaccgaagccaaaaccgaaactttcggcgccgataaa
gccaagctgttcccgacggatacggccatggtagtcaacgactttttggtggagcacttc
cccattattatcgactaccaattcacggccaaggtagaaggcgaatttgaccagattgcc
aacggccaggagcagtggggcaagatgctggccgatttctacggcaccttccacgaaacc
atcgagcggggccaggacattgagcgtagcaccctgggctcgacccgggaaattggaatt
caccccgaaaccggccagaagctgacggcccgcctgggccgctatggcccttacgtgcag
attgagcccaaggaaggcgcgccggaaggtgaaaaggcggtgtatgccagcctgcgcaaa
ggccagtttatcgaaagcatcaccttagaagaagccctggacctgtttaagctgccacgt
attgtaggccagtttgaggacaaggacatgacggccgctctgggtcggttcgggccgtat
attcgccacgatagtaagttctattccctgaccaaggagcaggacccgcacaccatcacc
gcccaggaggccattgacctgattgaggccaagcgcaaagccgatgccgagcggctgatt
aaagatttccctggtcgggaagacgtgcaggtgcttaatggtcgttttgggccctacatc
gtggtgggcaagaaaaacgtgaagattccaaagggcgaagaacccatggagctcactttg
gagcgctgcctggagctggccgaagctacccccgataagcccgccaagggtgggcggttt
gccaagaaagctgctcccgccgctgaagatacggccgacaagcccgcgaagaaaaaaccc
gctgccaaggctccggccaagaaggccgccggtacggcggcaaaaaaaccggcagctaaa
aagcccacagccaaagccaagtaa
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