Hymenobacter cellulosivorans: MUN80_17585
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Entry
MUN80_17585 CDS
T09419
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
hcf
Hymenobacter cellulosivorans
Brite
KEGG Orthology (KO) [BR:
hcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hcf03032
]
MUN80_17585
03400 DNA repair and recombination proteins [BR:
hcf03400
]
MUN80_17585
Enzymes [BR:
hcf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
MUN80_17585
DNA replication proteins [BR:
hcf03032
]
Prokaryotic type
DNA Topoisomerases
MUN80_17585
DNA repair and recombination proteins [BR:
hcf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MUN80_17585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
UOQ51565
LinkDB
All DBs
Position
4152356..4153477
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AA seq
373 aa
AA seq
DB search
MPTTAAPRPKVKKKHLLPLEEAHDLYKDPARQAELAGLRYLPDTKAGITRKAGRTGSFSY
VDAKGDKVTDEKTLSRIGSFVIPPAWTDVWIAPSANAHLQVTGRDAKGRKQYIYHPAWDQ
ARSLTKFSRLRAFGDKLPELRQRIQHDLKRPKLDREKVIALVLTLMDQSFIRVGNKEYAK
KNKSYGLTTLRDRHVQVAGDEVHFTFVGKKGVPHDVSLHDRKLARLVQKCKEIPGQHLFQ
YYAPDGHRAELESGDVNEYLQQVTGLPLSAKDFRTWGGTVKMVECLESVLNQEPELPKDK
VLKRAVKDVAAGLGNTPTVCSKYYIHPQVVELFHSDKLIDYLRRHDANPAENDLLTPTEH
MVLDMLQEVDKVR
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgcctaccactgccgcgccccgccccaaagtcaagaaaaaacacctgctgcccctggag
gaagcccacgatttgtacaaagaccccgcccggcaggccgaactggccggcctgcgctat
ctgcccgataccaaagccggcattacccgcaaagccgggcgcacgggctcgttttcatat
gtagatgccaagggcgacaaagtcaccgacgagaagacgctcagccgcatcggtagcttc
gtgattccgccggcctggaccgacgtctggattgccccctcagccaatgcccacctgcag
gtaaccgggcgcgacgccaagggccgcaagcagtacatctaccatccggcctgggaccag
gcgcgcagcctgaccaagttcagccgcctgcgtgccttcggcgacaagctgcccgagctg
cgccagcgcatccagcacgacttgaagcgccccaagctggaccgggagaaggtcattgcc
ttggtgctcaccctcatggaccagtcctttatccgggtgggcaacaaggaatacgccaaa
aagaacaaaagctacggcctgaccaccctgcgtgaccggcacgtgcaggtggccggcgac
gaggtgcatttcaccttcgtaggcaaaaaaggcgtgccccacgacgtcagcctgcacgac
cggaaactggcccgcctggtgcagaaatgcaaggaaattcccggccagcacctgttccag
tactacgcccccgacgggcaccgcgccgagctggaatcaggcgacgtgaacgagtacctg
cagcaggtgactggtttgccgttgtcggccaaagacttccggacctggggcggtacggta
aaaatggtggagtgcctcgagtcggtcctgaatcaggagccggagctgcccaaggacaag
gtgctgaaacgggcggtgaaagacgtagcggcgggcctgggcaatacgcccaccgtgtgc
agcaagtactacattcatccgcaggtagtcgagctgttccattccgacaagctcatcgac
tacctgcgccgccacgacgccaaccccgccgaaaatgacctgctcacgcccaccgagcac
atggtgctcgacatgctgcaggaagtcgataaggtcaggtaa
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