Hymenobacter cellulosivorans: MUN80_17610
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Entry
MUN80_17610 CDS
T09419
Name
(GenBank) GIY-YIG nuclease family protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
hcf
Hymenobacter cellulosivorans
Pathway
hcf03030
DNA replication
hcf03430
Mismatch repair
hcf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hcf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MUN80_17610
03430 Mismatch repair
MUN80_17610
03440 Homologous recombination
MUN80_17610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hcf03032
]
MUN80_17610
03400 DNA repair and recombination proteins [BR:
hcf03400
]
MUN80_17610
Enzymes [BR:
hcf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MUN80_17610
DNA replication proteins [BR:
hcf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MUN80_17610
DNA repair and recombination proteins [BR:
hcf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MUN80_17610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
DEDDh_C
DNA_pol_A_exo1
DUF7508
Motif
Other DBs
NCBI-ProteinID:
UOQ51570
LinkDB
All DBs
Position
complement(4158179..4159696)
Genome browser
AA seq
505 aa
AA seq
DB search
MYAIIDLETTGGQPTQDRITEVAIFIHDGDKVVDQYSTLVNPGRPIPFFITQLTGITDDM
VRDAPKFHEVARKIVELTEGCVFVAHNVRFDYSFMKKEFADLGYNYSRKTLCTVRLSRSL
IPGQPSYSLGKLCQNIGIPLEGRHRAAGDAAATAILFDRLLKISQQDEALRNPTVSAADT
LASVDALAPAGRSKKAAAPAASPAGVTTKQPSPRRVAAVQEAIRTALLPPNITPEKVASL
PQEAGVYYFHNQQGEVIYVGKSINIYKRIQQHFAVDYKSRKSLEFKNSISDITWELTGSE
LVALLYESAEIKRMKPLYNRAQRRSVFPAGIFLRTDENGYKRLYYGRADDHAESHPLIAL
GNQYKAKGFLFHKVAKFNLCQKLCDLYKTNGSCFDYQVHRCKGACLGLEPAEEYNKRVEE
AIESFTYEHGSFVIIGKGRREDEKTVVVVEHGRYLGFGYVDGEFSARKLNDFKEVITRYN
DNKDVQQIIRQYLRTKHKDKVKVFK
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
ttgtacgccatcattgaccttgaaactaccggcgggcagcctacccaggaccgcattacg
gaagttgccatatttattcacgacggcgacaaagtcgttgatcagtacagtacgctcgta
aatccgggccggccgatccccttctttatcacccagctcactggcattaccgacgacatg
gtgcgcgacgcacccaagtttcacgaggtagcccgcaagattgtcgagctgaccgagggc
tgcgtatttgtggcccacaacgtgcgtttcgactactccttcatgaaaaaggagtttgcc
gacctgggctataactactcgcgcaaaaccctgtgcaccgtgcgcctgagccgctccctg
attccgggacagccgagctacagcctgggcaagctctgccagaacatcggcattccgctg
gaaggccggcaccgcgccgccggcgacgctgccgctacggccatcttgtttgaccgcctg
ctcaaaatcagccagcaggacgaggccctgcgcaacccgaccgtatcggccgccgacacg
ctggcctcggtagacgccctggccccggcgggccgcagcaagaaagcagcggctccggcg
gcctctcctgccggcgttacgaccaagcagcccagcccccgacgcgtggcggcggtgcag
gaagccattcgcacggctttgcttccgcccaatattacgcccgagaaagtcgcgtctttg
ccccaggaggcgggcgtgtattactttcacaaccagcagggcgaggtgatctacgtcggc
aagagcatcaacatctacaagcggattcagcagcacttcgccgtcgattataagtcgcgc
aagtcgctggagttcaagaacagcatttccgacatcacctgggagctgaccggctcggag
ctggtggccctgctctacgagtcggcggaaatcaagcgcatgaagccgctctacaaccgg
gcccagcgccgctcggtgtttccggccggcatctttctgcgcaccgacgaaaacggctac
aagcgcctttactacggccgcgccgacgaccacgccgagtcccacccgctgattgcgttg
ggcaaccagtacaaggccaagggctttctgtttcataaggtggccaagtttaatttgtgc
cagaagctctgcgacctgtacaaaaccaacggttcctgcttcgactaccaggtgcaccgc
tgcaagggcgcctgcctgggactagagcccgccgaggagtacaacaagcgcgtagaggaa
gccatagagagctttacctatgagcacggctcctttgttattatcggcaagggccggcgc
gaggacgagaaaaccgtggtagtcgtggagcatggccgctacctgggcttcggctacgtg
gacggcgagttttcagcccgcaagctcaacgatttcaaggaagtcattacccgatataac
gacaacaaggatgtgcagcagatcatccggcaatatctgcgcactaagcataaggataaa
gtcaaggtatttaaatag
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