Hymenobacter cellulosivorans: MUN80_19880
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Entry
MUN80_19880 CDS
T09419
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
hcf
Hymenobacter cellulosivorans
Pathway
hcf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hcf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MUN80_19880 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hcf03019
]
MUN80_19880 (recQ)
03400 DNA repair and recombination proteins [BR:
hcf03400
]
MUN80_19880 (recQ)
Enzymes [BR:
hcf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MUN80_19880 (recQ)
Messenger RNA biogenesis [BR:
hcf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MUN80_19880 (recQ)
DNA repair and recombination proteins [BR:
hcf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MUN80_19880 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HTH_40
Helicase_C
HRDC
RecQ_Zn_bind
HTH_11
ResIII
GerE
HTH_38
HTH_24
HTH_7
HTH_IclR
HTH_20
zf-CXXC
Tugs
Motif
Other DBs
NCBI-ProteinID:
UOQ52010
LinkDB
All DBs
Position
complement(4683631..4685862)
Genome browser
AA seq
743 aa
AA seq
DB search
MLFAPEPLAPTLASARRVLKQYYGYDTFRPMQESIISNIMSGKDTVVLMPTGGGKSVCFQ
VPAVVQEGVCVVVSPLIALMKDQVEALKANGIPAEYINSSVGQSEQTSIASDCLNGYLKL
LYVSPEKLVSPGFIQFLQRLRISMFAIDEAHCISSWGHDFRPEYTQLRVLREQFPRVPII
ALTATADRLTQRDIQQQLRMHEPQVFLSSFDRPNLNLIVRPGQNRVGSIVEFVTGRPSEA
GIVYCLSRKQCETLAQKLKEKGVRAGHYHAGMTPNQRGAVQEAFLRDDLQVIVATIAFGM
GIDKSNVRWVIHYNLPKNIEGYYQEIGRAGRDGAPSTAVLFYSYADVMSLRDMLTKDADP
RLAQLSLTKLERMQQFAEAASCRRKILLNYFGETLATDCGNCDICRNPPTTFDGTELAQK
ALSAVVRMREKAPIGLLIDVLRGMRNQAILQGGYEQIKTYGAGRDLPYLDWYSYIHQMLN
DGLLYIAYEEGYALKITDLGKQVLQGQRQLPMKKFQPAEKAEKQPRGKKAASAAATPTDA
TTQLFERLRQLRKRIADEQNVPPYVIFTDTTLQEMAAERPMSRTAMLAIGGVGMKKFENY
GEVFIKAILEHGGAPNPADTEDNDEDEDLPSTRKPRRPREAGDTHENTLQLHRAGLSVEA
IAERRSLSPSTIRAHIETLYAKGQPIRLEEFLSMDEFAKIQTAIGQLGGDPPLRDLFDHL
REQYDYFKLRLAVMYQKRLRGNK
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atgttatttgcccccgaacccctcgcgcccacgctggcttctgcccggcgcgtcctgaag
cagtattatggttacgatacgttccggcctatgcaggaaagtatcatttccaacatcatg
agcggcaaggataccgtggtgctcatgcccaccgggggcggcaaatcggtgtgcttccag
gtgccggccgtggtgcaggaaggcgtctgcgtggtcgtctcgccactgattgcgctgatg
aaggaccaggtcgaagccctgaaagccaacggtataccggccgaatacatcaacagcagc
gtgggccagagcgagcaaaccagcattgcctccgactgcctcaacggctacctcaagctg
ctctacgtaagccccgagaagctggtctccccgggctttatccagtttctgcagcgcctg
cgcatcagcatgtttgccatcgacgaggcccactgcatctcgtcctgggggcacgacttc
cgccccgagtacacccagctgcgggtcttgcgggagcagtttccgcgggtgcccatcatt
gccctcaccgccaccgccgaccgcctcacccagcgcgacatccagcagcagctgcgcatg
cacgagccccaggtgtttttgtcgagcttcgaccggcccaacctcaacctgattgtgcgg
cccggccaaaaccgggtgggcagcatcgtggagtttgtcacgggccgaccttcggaagcg
ggcatcgtgtactgcctctcgcgcaagcagtgcgaaacgttggcccagaagctcaaggag
aaaggcgtgcgcgccggccattaccacgccggcatgacgcccaaccagcgcggggccgtg
caggaagcctttctgcgcgacgatttgcaggtcatcgtggctaccattgccttcggcatg
ggcatcgataaaagcaacgtgcgctgggtaatccactacaacctgcccaagaacatcgaa
ggctactaccaggaaatcgggcgggccgggcgcgacggagccccgtccacggcggtgctc
ttctacagctacgccgacgtgatgagcctgcgcgacatgctcaccaaggacgccgacccg
cgcctggcccaactcagcctgaccaagctggagcgcatgcagcagtttgccgaagccgcc
agctgccggcgcaaaattctgctcaactacttcggtgaaaccctggctaccgactgcggc
aactgtgacatctgccgcaacccgcccacaacgtttgacggcaccgaactagctcagaaa
gccttgtcggcggtggtgcgtatgcgcgaaaaagcccccatcggcctactcatcgacgtg
ctgcggggcatgcgcaaccaggccatcctgcagggcggctacgagcagatcaaaacctac
ggcgcgggccgcgacctgccgtatctggactggtacagctacatccaccagatgctcaac
gacggcctgctctacattgcctacgaggaaggctacgcgctgaaaatcaccgacctgggc
aagcaggtgctgcagggccagcgccagctgccgatgaagaagtttcagcccgccgaaaaa
gccgaaaagcagccccggggcaagaaagctgccagcgccgccgctacgcctaccgatgcc
acgacccagctcttcgagcggctgcggcagctgcgcaagcgcattgccgacgagcagaac
gtgcccccgtacgtcatcttcaccgatactacgctccaggaaatggcggccgagcggccc
atgtcgcgtacggccatgctggccattggcggcgtaggcatgaaaaagttcgagaactac
ggcgaggtctttatcaaagccattctggagcacggcggcgcacccaaccccgccgatacg
gaggacaacgatgaagacgaggacctgcccagcacccgcaagcctcgccgcccccgcgag
gccggcgacacccacgaaaacaccctgcagctgcaccgcgccggcctgagcgtagaagcc
attgccgagcgccgcagcctgagccccagcaccatccgggcccatatcgaaacgctctat
gccaagggccagcccatccgcctggaggagtttctgagcatggacgaattcgccaagatc
cagaccgccatcgggcagctcggcggcgacccgcccctgcgcgacctgttcgaccacctg
cgcgaacagtatgactactttaagcttcgcctggccgtgatgtaccaaaagcgcctgcgg
ggaaacaagtga
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