Hymenobacter cellulosivorans: MUN80_21185
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Entry
MUN80_21185 CDS
T09419
Name
(GenBank) RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
hcf
Hymenobacter cellulosivorans
Brite
KEGG Orthology (KO) [BR:
hcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hcf03016
]
MUN80_21185
Enzymes [BR:
hcf01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
MUN80_21185
Transfer RNA biogenesis [BR:
hcf03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
MUN80_21185
Prokaryotic type
tRNA splicing ligases
MUN80_21185
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
YbcO
Motif
Other DBs
NCBI-ProteinID:
UOQ55708
UniProt:
A0ABY4FGR8
LinkDB
All DBs
Position
complement(5009695..5010774)
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AA seq
359 aa
AA seq
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MPDAHQGYGLPIGGVLAVDNAVIPYGVGMDIGCRMALSVFPLPEHELYQRAKELRNIILA
NTRFGSKFSAFDKKMDDAIFERPEFKDIAVLRGKRQTAVEQIGTSGSGNHFVEFGVVDIT
DPDNELDVPVGKYVGLLSHSGSRGIGAAVAQHYTKLAMNACPLPPEARHLAWLSLDSQAG
QEYWAAMNLAGDYASACHDQIHRRISRALGEKPLAKVENHHNFAWRETLSDGREAIVHRK
GATPAGKGVLGVIPGSMTAPGFIVRGRGERDSLQSASHGAGRRMSRGQAMKTLKEGDVRR
ELKDHGIELMGGGLDEAPMAYKDIHQVMAHQRDLVDVLGSFTPKIVRMDAGGKGGKGGE
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgcccgacgcccaccagggctacggcctgcccattggcggggtgctggccgtcgacaat
gccgtcattccctacggcgtgggcatggatattggctgccgcatggccttgtcggtgttt
ccgttgcccgagcacgagctctaccagcgggccaaagagctgcgcaacatcattctggcc
aatacccgctttggtagcaagttttcagccttcgataagaaaatggacgacgccattttc
gagcggcccgagttcaaggacattgccgtactgcgcggcaagcgccaaaccgccgttgag
caaatcggcacctcgggctcgggcaaccacttcgtcgagttcggcgtggtcgacatcacc
gacccggacaacgagctcgacgtgcccgtgggcaaatacgtaggcctgcttagccactcc
ggctcccgcggcattggggcggctgtggcccagcactacaccaagctggccatgaacgcc
tgccccttgccgcccgaagcccgccacctggcctggcttagcctcgactcccaggccggg
caggaatactgggccgccatgaacctggccggcgactacgcctcagcctgccacgaccag
attcaccgccgcatcagccgggccctgggtgagaagccgctagccaaggtcgaaaaccac
cacaactttgcctggcgcgaaaccctatccgacgggcgcgaggccattgtgcaccgcaaa
ggcgccacgccggccggtaagggcgtgctgggcgtcattccgggctcgatgaccgcgcct
ggcttcattgtgcggggccgtggcgagcgggactcgctgcaatcggcttcgcacggggct
gggcggcgcatgtcgcgggggcaggccatgaaaacccttaaggaaggcgacgtgcgccgg
gagctcaaagaccacggcatcgaactcatgggcggcggcctcgacgaagcgccgatggcc
tacaaggacattcaccaagtcatggcccaccagcgcgacctagtcgacgtgctgggttca
ttcacgcccaaaattgtgcgcatggatgccggcggcaagggcggcaaaggtggagagtag
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