Hymenobacter cellulosivorans: MUN80_24200
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Entry
MUN80_24200 CDS
T09419
Name
(GenBank) HRDC domain-containing protein
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
hcf
Hymenobacter cellulosivorans
Brite
KEGG Orthology (KO) [BR:
hcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hcf03016
]
MUN80_24200
Enzymes [BR:
hcf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
MUN80_24200
Transfer RNA biogenesis [BR:
hcf03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
MUN80_24200
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
UOQ52831
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All DBs
Position
5727317..5728495
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AA seq
392 aa
AA seq
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MSTPTIQYLTTAAEMEQAAAALQKAPRLAVDLEFDDMRHRYGRNLALIQIYDGQVVYLLD
PIPLTNPAQELEPLWALLRDPAVEKVFHSCKSDILLLDELYGVHVRNILDTSVQYTLLGE
SDNNISLGRLIQAELGLEVDKGEQKSNWLKRPLTEAQKVYAANDVLYLFELADRLKAKLA
ELGRTEWAEQENAALEEVRYTRDDRPYLRIAGKYRIQPGELPLFRDLYMLRDQVARQLDK
PPYMVFANDRLSELVRATPRDANDWKNTRGLHPELKRTPYLEQLAALSPDNFVPVPEPAQ
TGEQRRFPFRRRLSGDKAAKADAREQLLTQLKGLITADINVYVANLVLSNRLVADIIELG
ADQVLRPWQKTILQDACQRHGLSYEQIAEPFA
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgtctacacctactattcagtacctgactaccgctgccgaaatggagcaggccgccgca
gcgctgcaaaaagctccgcgcctggccgtcgacctcgaattcgacgacatgcgccaccgc
tacggccgcaacctggcgctgatccagatttacgacgggcaggtggtctacctgctcgac
cccattcccttgaccaacccggcccaagagctggagcccctctgggccctgctgcgcgac
ccggccgtggaaaaggtatttcacagctgcaagtccgacattctgctcctcgatgagctc
tacggcgtgcacgtgcgcaacattctcgacaccagcgtgcagtatacgttgctgggcgag
tcggacaacaacatctccctgggccgcctgattcaggccgagttgggcctggaagtagac
aagggcgagcagaaatcgaactggctgaagcgccccctgaccgaggctcagaaagtgtac
gccgccaacgacgtgctctaccttttcgagctggccgaccgtctcaaggccaagctggcc
gagctgggccgcaccgaatgggccgagcaggaaaacgctgccctggaggaagtgcgctac
acccgcgacgaccggccctacctgcgcattgcgggcaagtaccggattcagcccggcgag
ttgcccctgtttcgcgacttgtacatgctccgcgaccaggtggcccggcagctcgacaag
ccgccctacatggtgtttgccaacgaccgactctcggagctggtgcgtgctaccccccgc
gacgccaacgactggaaaaatacccgcggcctgcaccccgagctcaagcgcaccccttac
ctggagcaactggccgccctctcgcccgacaacttcgtgcccgtgcccgagccggcccaa
accggtgagcagcgccgcttccccttccgccgccgcctcagcggcgacaaggccgccaaa
gccgacgcccgcgagcagctcctgacccagcttaaaggcctcatcacggccgacatcaac
gtgtacgtagccaacctggtgctctccaaccgcctcgtggccgacatcatcgagctgggc
gccgaccaggtgctgcgcccctggcagaaaaccattctgcaggatgcctgccagcgccac
gggctaagctacgagcaaatagccgagccgtttgcctga
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