Hymenobacter cellulosivorans: MUN80_25110
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Entry
MUN80_25110 CDS
T09419
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
hcf
Hymenobacter cellulosivorans
Pathway
hcf03030
DNA replication
hcf03430
Mismatch repair
hcf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hcf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MUN80_25110 (dnaE)
03430 Mismatch repair
MUN80_25110 (dnaE)
03440 Homologous recombination
MUN80_25110 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hcf03032
]
MUN80_25110 (dnaE)
03400 DNA repair and recombination proteins [BR:
hcf03400
]
MUN80_25110 (dnaE)
Enzymes [BR:
hcf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MUN80_25110 (dnaE)
DNA replication proteins [BR:
hcf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MUN80_25110 (dnaE)
DNA repair and recombination proteins [BR:
hcf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MUN80_25110 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HHH_3
T2SSK
DUF6282
Motif
Other DBs
NCBI-ProteinID:
UOQ53004
UniProt:
A0ABY4F8L9
LinkDB
All DBs
Position
5925622..5929338
Genome browser
AA seq
1238 aa
AA seq
DB search
MPVFSHLHCHTQYSLLDGQASISALMKKAQADGMPAVALTDHGNMFGAFNFVAEANKYNV
KPIVGCEFYLVEDRHKKSFSREKGERDVRHHQLLLAKDQAGYQNLAKLCSMSFIEGVYSK
YPRIDKELLLQYHEGLIATSCCIGAEIPQALLWKTEEEAEKQLKWWLDVFGDDYYIEIQR
HGIENIDNTGKSQEDLNQVLLRWAQKYNVKVICTNDSHYVNQEDFAPHDLLLCVNTGEEY
SIPVGDFQTKYFRLISGEKQVLYDHLDNLRPLASSDDSVRRQLMRIDEEAQMPRPRSRFG
FPNDQFFFKSQEQMNQLFSDVPESVDNTNEIVDKITPPKLQRDILLPNFPIPAPFANADE
FLRELTYVGAFGPSAGKGIVTMTKPPRYSERTPEIEERLDYELRIIETMGFAGYFLITQD
FINHGRSVGVAVGPGRGSAAGSAVAYCVGITNIDPIKYSLLFERFLNPERVSMPDIDIDF
DDVNRQRVIDYVVDKYGKTQVAQIITFGTMAAKSSIKDVARAMELPLPLTNELAKMVPEK
PGTTLAGAFAENQELDMIRRDDAPDNLRGQILRLAEKLEGSVRNTGIHAAGVIIAPDDIT
KYIPVSTSKDSDLLVTQFDGKVIESAGMLKMDFLGLKTLTIIVDALELIKKNHGVDINID
DIPLDDPKTYELYQRGDTIGTFQFESEGMRMYLKDLKPTNIEDLIAMNALYRPGPMQFIP
NFINRKHGREEVEYPHELLEPILNYSQGIMVYQEQIMQAAQILAGYSLGGADLLRRAMGK
KDMKKMAQEREKFCKGAAELHGIKEKKANEVFDVMEKFAAYGFNRSHSAAYSVVAYQTGY
LKANYPAEYMAAVLTNNMSDIKKVTFFIEEARRQGVAVLGPDVNESILKFNVNEKGQIRF
GMAAVKGAGEAAIENIVAERAKKGPFTDIFDFSKRVNLRAVNKKTFESLALSGAFDSFER
YHRRQFVEAPSGDQNLIDKAVRMGQQYQADQDSAQQSLFGGGAFGAVAMPLPKVADMEPW
PATEQLRREKEVVGFYLSGHPLDDFKLEIDSYCTCGLDKVENYKNREVTVAGLISNVMFK
TTKTGQPFVSFSVEDYESSLNLALFRDDYSRFSALINPRNYDKEQVPPMYIRGKYAQRFR
DSDQFEFKILTMEPLFNVAEKLANGVRVQLDLRTITEPFMDRFMEAVEGCAGSKKLEIKF
AEPHEHLTVDTYSRRYRIEPKEFIRKMRAMEIEACQLI
NT seq
3717 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtattctcccacctgcactgccacacccaatattccctgctcgacggccaggct
agcatcagcgccctgatgaaaaaggcccaggccgacggcatgcccgccgtggctctcacc
gaccacggcaatatgtttggcgcgttcaacttcgtggccgaagccaataagtacaacgtg
aagcccatcgtcggctgcgagttttacctggtggaagaccggcacaagaagagcttcagc
cgggaaaaaggcgagcgggacgtgcgccaccaccagctcttgctggccaaggaccaggcc
ggctatcagaacctggccaagctctgctccatgagcttcatcgagggtgtgtactccaag
tacccgcgcatcgacaaggaactgctgctccagtaccacgagggtctgattgccacctcc
tgctgcatcggtgccgaaatcccgcaggccctgctctggaaaaccgaggaggaagccgag
aagcagctcaagtggtggctcgacgtgtttggcgacgactactacatcgaaatccagcgc
cacggcatcgagaacatcgacaacaccggtaaaagccaggaagacctcaatcaggtgctg
ctgcgctgggcccagaagtacaacgtcaaggtcatctgcaccaacgactcgcactacgtc
aaccaagaggacttcgcgccccacgatttgctcctgtgcgtgaacaccggggaagagtac
agcattccggtcggcgacttccagaccaagtactttcgcctgatttcgggcgaaaaacag
gtcctctacgaccatctcgacaacctgcgccccctggccagctccgacgactcggtgcgc
cgccagctcatgcgcatcgacgaggaagcgcagatgccccgcccccgctcccgctttggc
ttccccaacgaccagttcttcttcaagagccaggagcagatgaaccagttgttcagcgac
gtgccggaaagtgtggacaacaccaacgaaatcgttgataaaatcacgccgcccaagctg
cagcgcgacattctgctgcccaacttccccattcccgcgccctttgccaacgccgacgag
tttctgcgcgagctgacctacgtgggggctttcgggccgagtgcgggcaaaggcatcgtg
acgatgaccaaaccgccccgctattccgagcgcacgcccgaaattgaggagcgcctggac
tacgagctgcgcatcatcgagacgatgggttttgccggctatttccttatcacccaggac
ttcatcaaccacggccgcagtgtgggcgtggccgtagggccgggtcggggctcggctgcc
ggttcggccgtggcctactgcgtgggtatcaccaacatcgacccgattaagtactcgttg
ctgttcgagcgtttcctcaacccggagcgcgtgtccatgcccgatattgatatcgacttc
gacgacgtgaaccgccagcgcgtcatcgactatgtggtggataagtacggcaagacgcag
gtagcccagattatcaccttcggtaccatggccgccaagtccagcatcaaggacgtggcc
cgggctatggagctgcccctaccgctgaccaacgagttggccaaaatggtacccgaaaag
cccggcaccacgctggccggggcctttgctgaaaaccaggagctggacatgatccggcgc
gacgacgcgcccgacaacctgcgcggacagattctgcgcctggctgaaaagctcgaaggc
tcggtccgcaacaccggtattcacgcggccggcgtcatcatcgcccccgacgacatcacc
aagtacattccggtgtccacctccaaggactcggacctgctcgtgacccagttcgacggc
aaggtgattgagagtgccgggatgctgaagatggactttctgggcctgaaaaccctgacc
atcatcgtcgatgccctggagctcattaagaagaatcacggcgtcgatatcaacatcgac
gacatcccgctcgacgaccccaaaacctacgagctctaccagcgcggcgacaccatcggc
acgttccagtttgaatccgagggcatgcgcatgtacctcaaggacctcaagccgaccaac
atcgaggacctgattgccatgaacgccttataccgcccgggtccgatgcagttcattccg
aacttcatcaaccgcaagcacggccgcgaggaagtggaatacccgcacgagctgctggag
cccattctgaactactcccagggcatcatggtgtaccaggagcagatcatgcaggccgcc
cagattctggccggctactccctcggtggtgccgacttgctgcgccgggccatgggtaag
aaagacatgaagaagatggcccaggagcgggagaaattctgcaagggcgcggccgagctg
cacggcatcaaggaaaagaaggccaacgaggtgttcgacgtgatggagaagtttgcggcc
tacggcttcaaccgctctcactcggctgcctactcggtggtggcttaccagaccggctac
ctcaaggccaactaccccgccgagtacatggccgccgtgctgaccaacaacatgtcggac
atcaagaaagtgaccttctttattgaggaagcccgccgccagggcgtggccgtactcggg
cccgacgtgaacgaatccatcctcaagttcaacgtaaacgaaaagggccagatccgcttc
gggatggccgccgtgaaaggtgctggcgaggccgctattgagaacatcgtggccgagcgg
gctaaaaagggcccgttcaccgatattttcgacttctccaagcgcgtcaacttgcgggcc
gtcaacaagaagaccttcgaaagcctggccctgtcgggggccttcgactcgtttgagcgc
taccaccgccggcagtttgtagaagctccctcgggcgaccagaacctcattgacaaggct
gtgcgcatgggccagcagtaccaggccgaccaggactcggcccagcaaagcttgtttggc
ggcggggccttcggagccgtggccatgcccctgcccaaggtggccgacatggagccctgg
cccgctaccgagcagctgcgccgcgaaaaggaagtggtaggcttctacctctcgggccac
ccgctggacgatttcaagctggaaatcgactcctactgcacctgcggtctagacaaggtg
gagaactacaaaaaccgcgaggtgacggtagccgggctgatttcgaacgtcatgttcaaa
accaccaagaccgggcagcccttcgtctcattcagcgtggaagattacgagtcgtccttg
aacctggccttgttccgcgacgactacagccgtttctcggccctgattaaccctcgcaac
tacgacaaggagcaggtgccgcccatgtacatccgcggcaagtacgcccagcgcttccgc
gactccgaccagttcgagttcaagattctgactatggagcccctgttcaacgtggccgaa
aagctagccaacggcgtgcgggtccagctcgacctacgcaccattaccgagcccttcatg
gaccggtttatggaggctgtagaagggtgcgcgggctcgaaaaaactggaaatcaagttt
gccgagccccacgagcacctcaccgtcgacacctactcgcggcgttaccgcatcgagccc
aaggagtttatccgcaagatgcgggctatggaaattgaggcctgccagctgatctga
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integrated database retrieval system
