Hemicordylus capensis (graceful crag lizard): 128322449
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Entry
128322449 CDS
T08891
Symbol
MSH2
Name
(RefSeq) DNA mismatch repair protein Msh2 isoform X1
KO
K08735
DNA mismatch repair protein MSH2
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Pathway
hcg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
128322449 (MSH2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hcg03400
]
128322449 (MSH2)
DNA repair and recombination proteins [BR:
hcg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
128322449 (MSH2)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
MutS_I
AAA_27
MCU
Motif
Other DBs
NCBI-GeneID:
128322449
NCBI-ProteinID:
XP_053099652
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All DBs
Position
1:436197400..436285774
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AA seq
936 aa
AA seq
DB search
MAASGEGCSPREGFWPEGSKAECGFVRAVQALPPKPNTTVRFFERGDYYTVHGVDAFLAA
EELFRTRGVIRTLGAGTQKLESVAISKMNFESFLRDLLLVRQYRAEVYKNKAGSKSIKEN
EWKLAYKGSPGNLAQFEDILFGNHDMSSSVGVVAIKLSLTDGQKVVGVGFVDSLVRKLEV
CEFHDNDQFSNLEALLVQMGPKECILPAGEVGGDMGKLRQVVQRGGILITERKKNDFSAK
DVVQDLNRLLRSKRKEQMSSAALPEMDKEVAISALSAVIKYLELLNDESNFGQFEVNTFT
LNQYMILDHAAVRALNLFHSSTENAQSTHCLTGLLNKCKTPQGQRLVTQWIKQPLVDKNK
IEERLNLVEAFVEDAELLQSLQEDLRRFPDFSRLAKKFLKKATLQDCYKIYQAVKQIPTV
IQALDKNEGKHDMLLQAVFTAPLNELHSDFSKFQEMIETTLDLDKVEIHEYLVKPSFDPN
LTELREKMDKLEEKMQAVLKIAAKELSLEAGKNIKLECNAQFGHFFRITYREERSLRNNL
KYTILDTQKNGVKFSNSQLKELNEKYIKFKEEYEEGQDAIAKEIINIASGYKEPIQFLND
VIAQLDAIVSFAHVSNGAPTPYVRPTILEKGEGRIVLKGSRHPCIEVQDDVAFIPNDVTF
EKGKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVTVVDCILARVGAGDS
QLKGVSTFMAEMLETSSILRTATENSLIIIDELGRGTSTYDGFGLAWAISEYIATKIRAF
CMFATHFHELTVLADQVSCVNNLHVTALTTEETLTMLYRVKKGACDQSFGIHIAELAAFP
KHVIESAKAKALELEEFQNIRKPQEDDEEPAAKRCYKEKQEGENIIQDFLSKVKAMPLKD
MSEEDIRARLKQLKDEVLAKNNSFVNEIISQIKVTS
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgtccggtgagggctgctctccgcgtgagggcttctggcccgagggatcgaag
gccgagtgcggcttcgtgcgcgcggtgcaggcgctgcctcctaagcccaacaccaccgtg
cgcttcttcgagcgtggcgattactacacggtgcacggcgtcgatgccttcctggcggct
gaggagcttttccggacgcggggggtgattcggaccctgggcgcaggcacccagaaactt
gagagtgttgcaattagcaagatgaactttgaatcgtttttgagggatctccttctggtt
cgtcagtacagagctgaagtgtataagaacaaagcaggaagcaaatctatcaaggagaat
gagtggaaactggcatacaagggttctccagggaatcttgcccagttcgaggatattctg
tttggtaaccatgatatgtcatcttctgttggtgttgtggccattaagctgtccttgact
gatggacaaaaggttgttggagttgggtttgtggattccttggtgaggaaactggaagtg
tgtgagtttcatgataatgatcagttctccaacctggaagctcttctggttcagatggga
cccaaggagtgtatactccctgctggagaggttggtggagatatgggaaaactgagacag
gttgttcaaagaggaggaatcctgatcacagagaggaaaaagaatgacttttcagccaag
gatgttgttcaagatctcaaccgcttattgagatcaaagaggaaagagcagatgtcgagt
gcagcactacctgaaatggacaaagaggttgccatctctgctttgtctgcggtaattaag
tacttagaacttctaaacgatgaatctaattttgggcaatttgaagtcaatacctttacc
ctcaatcagtacatgatactggatcatgctgctgtcagagcacttaaccttttccacagt
tctacagaaaatgcccaaagtacacattgtctgactggactgttaaataagtgcaaaaca
cctcaaggacagagactagtgacccagtggatcaaacagcccttggtggacaagaacaaa
atagaagaaaggctaaatttggtggaggcctttgtggaagatgcagagctattgcagtcc
cttcaggaagacctccgtcgcttcccagacttcagtcggcttgcaaaaaaatttctaaag
aaagccactctgcaggactgctacaaaatctaccaggctgttaaacagatacctaccgtg
attcaggcactggacaagaatgaagggaaacatgatatgctattacaagccgtgttcaca
gcgcctcttaatgagctacacagcgatttctccaagttccaagagatgattgaaacaact
ttagacttggacaaggtggaaatccatgaatatcttgtgaaaccttcctttgacccaaac
ctgactgagctgagggagaagatggataaactagaggaaaaaatgcaagccgtgttaaag
attgcagccaaggagctaagcttggaagctggcaagaacatcaagctggagtgcaatgca
cagtttggacactttttccgaattacctacagggaggagaggtccctgcggaacaacttg
aaatacactatcctggatacccagaagaatggagtgaagttctccaacagtcagttaaaa
gagctaaacgaaaaatacatcaagttcaaagaagaatacgaggaagggcaggatgccatt
gccaaagaaataatcaacattgcatcaggatacaaggagcctatacagttcctgaacgat
gtcatagcccagttagatgcgattgtcagttttgcccatgtgtcgaatggggcgccaacg
ccgtatgttcggccaacgattctggaaaagggagaagggaggattgtgctgaaaggctca
agacacccctgcattgaagttcaagatgacgttgccttcatcccaaatgacgtgaccttt
gagaagggcaagcagatgttccatatcattactggaccaaacatgggagggaaatcgacc
tacatccgccagacgggggtgatcgtgcttatggctcagattgggtgctttgtgccatgt
gagtctgcagaggtgactgttgtcgattgtatcctggctcgagttggagctggtgacagt
caactgaaaggtgtctctactttcatggcagaaatgttggaaacttcctccatccttagg
actgcaacagaaaactcgttgatcatcattgatgagctggggagaggaacatctacctac
gatgggtttggattggcatgggctatttcagaatatattgccaccaaaatcagagccttc
tgtatgtttgccactcattttcatgaactgacggttctcgctgaccaggtttcctgtgtg
aataatttgcatgttacagcactgaccactgaggagaccctgactatgctgtatcgtgtg
aaaaaaggggcttgtgatcagagtttcggtatccacatagcagaacttgctgccttcccg
aaacatgtaatagagagtgcgaaggcaaaggcgctggagttagaagagttccagaacatc
agaaagccccaagaggatgatgaggagccagcggccaagagatgctacaaagagaagcag
gaaggtgagaacatcatccaggatttcctttctaaagtgaaagcgatgccattgaaagac
atgtctgaagaggacatcagagccagactgaagcagcttaaggatgaagtgttggcgaaa
aacaacagctttgtgaatgaaataatttcccaaataaaagttacttcatga
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