Hemicordylus capensis (graceful crag lizard): 128322938
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Entry
128322938 CDS
T08891
Symbol
CHD6
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 6 isoform X1
KO
K14436
chromodomain-helicase-DNA-binding protein 6 [EC:5.6.2.-]
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hcg03036
]
128322938 (CHD6)
Chromosome and associated proteins [BR:
hcg03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
128322938 (CHD6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Helicase_C
Chromo
BRK
ResIII
HTH_CHD1_Hrp3
DEAD
HDA2-3
MUN
Chromo_MIT1
Motif
Other DBs
NCBI-GeneID:
128322938
NCBI-ProteinID:
XP_053101205
LinkDB
All DBs
Position
4:complement(48914081..49120327)
Genome browser
AA seq
2754 aa
AA seq
DB search
MIMKIQKKEKQLPNFKVLSHSPMSDASITFECKPQSPFANSTDQEDLHDLVTISELASVN
LAQKDQQDVVPDVVPAEIVQNMVTSHNGMQDDGGGGTGVKKKRKKKELGQQELGGEREVK
PKRKREPKEPKEPKKPKEPKKPKEPKQEGAKKPRKPREPKAPKEPKDKKSNSESPPKAKP
KKSSTEQGPTPVEKKKKGKRKNDTPVESLELEQSLLSLSGQSPEESGESADSQKRRSGRQ
VKRRKYNEDLDFKVVDDDGETIAVLGAGRASALSASTLAWQAEEPPEDDANIIERILSSR
MVQKETYPGGTTYEQEEFYVKYRNFSYLHCKWATMEELEKDPRISQKIKRFRNKQAQMKH
IFTEPDEDLFNPDYVEVDRILEVAHTKDSDTGEEVTHYLVKWCSLPYEESTWELEEDVDP
GKIKEFEILQIPPELKSLERPASESWQKLEKSRDYKNNNQLREYQLEGMNWLLFNWYNRK
NCILADEMGLGKTIQSITYLSEIYLMGLRGPFLIIAPLSTITNWEREFRTWTEMNAIVYH
GSQISRQMIQQYEMVYRDTQGSPLPGLFKFHVVITTFEMILADCPELKKIQWRCVVIDEA
HRLKNRNCKLLEGLKLMSLEHKVLLTGTPLQNSVEELFSLLNFLEPQQFPSESAFLEEFG
DLKTEEQVKKLQSLLKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFT
FLSKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHSPDAPDFQLQAMIQ
AAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIHRRYTYERIDGRVRGNLRQA
AIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSK
AVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKGSNNGVQQLSKMEVEDLLRKGA
YGALMDEEDEGSKFCEEDIDQILQRRTQTITIQTEGKGSTFSKASFVASGNRTDISLDDP
NFWQKWAKIAELDTDTKNEKESLVIDRPRVRKQTKHYNSFEEDELMEFSELDSDSDERPT
RSRRLNEKTRRYLRAECFRVEKNLLIFGWGRWKDILTHGRFKWHLNEKDMEMICRALLVY
CVRHYKGDEKIKSFIWDLITPTKDGQNQALQNHSGLSAPVPRGRKGKKTKNQMLLPEIKN
ADWLTTCNPEIVLHDDSYKKHLKQHCNKVLLRVRMLYYLKAEVLGEAADKAFEGTPAKDL
DVLLPDIDYVEIPVDWWNAEADKSLLIGVFKHGYERYNAMRADPALCFLEKVGMPDEMLL
SVEQSVIDGVQDAPERANVDKEENSADKLDGLQKQEETSDCGEVTEKKDNSVAAQDGSDP
DKSSWPVSSALTARLRRLVTVYQRCNRKELPSRPEIIGPCNHGYWLQEEMFRRANEMDPM
NKEMQKRWTRREQADFYRTVSSFGVIYDPEKKIFDWTQFRSISRLEKKTDESLEKYFYSF
VAMCRNVCRLPHWKEDGPADPSIYVEPITEERAARTLYRIELLRKIREQVLRCPQLHDRL
KLCRPSLYLPVWWECGKHDRDLLIGTAKHGLNRTDYYIMNDPQLSFLDAYRNYAQHKRTG
VLGAENLCCHHQANSKLFCSPSYSQLERKRESADTETENCMKLVSTGDGLSRTESISQDD
SCENFMAKVRGMISINYDESSLPDSLMCMMYDEKACNSEHSSLARDSPSCTDVSSNTTKM
AEGKIDGDEDLSSCDAETTREPSFLDHLQLGSDQMEGQNAAQEPSTKETKPLESFTGEPC
DTLQHMENQYASAGSVPFERDSMEGVLSIGVYSPSLHNFDIEVHPEKRFMGLLHDKGLEE
KSVQSQSHSEEEEDEEEEEEDEDHLETAADAVENLRGCLKSPDVDEAQAIVQEGQKHSSC
ILNTLDSFMEERNKEPVESISSEQAASKCDSEPGAGEDDQAECESLEEHMPALQEIQACH
HHHSARGQGSAIQMELLKTHPICMKVDLWGDDSEGKRDSPVVQPLCESGIKREEDECENQ
DLEKRDEISQNQDCFEKFSEDESKSSMFAVPGEIDELQDVRAPTIAQLLQEKTLYSFSEW
PKDRVIINRIDNICHAILKGKWPSSSQPSEIQSMMPTPVLASNTGNRNSYTNSETSEPSF
SNGVITTQVQKEGFLAPTFVKDEHKHQQPYEFEMERDAKQRSLEQLVASHPHPSIVLNGW
RDAAVDLSRVADGSPANSSPFTLSASIPKLGTVNALQGSLGMDLSGILQAGLIHPVTGQI
VNGSLRRDDAAMRRRRGRRKNVEGIDVILLKERSLQTGLPEDQTLTVPSNINPDGPDITT
STQQTVPAPNVQAEKIVPNKSLLDWLRQQSDYTLEIPGFGTNFSEKPKQRRQRCKDPSKL
DINSLTGEERVPVVHKGTGRRLGGAMAPALKELPRWLDANMEYAVAADWSDIVKLSGFLP
ESKFNRILTEPVLRDAGPRRRGRRPRSELFKTPGIVADASSGIGPLFMNGLIAGMDLVGL
QNMRNMQGIPLTGLVGFPAGFAAMPAGEDVKSTLSMLPMMLPGMAAVPQMFGVGGLLNPS
MATTCTSTAPTSLASTTKSGTSHSEKDAEEKQSDPDAKTETLSEDKSGPSSFSDQSEPAI
TASNPVAFNPFLIPGMSSGLIYPSMFLSPGIGMALPSLQQTRHSEVTNLESQKRKRKKTK
GELANPEPETLLLSDKEHANNQNCTEQTPSVSAENEHHVPAEEKEKLREIKDTN
NT seq
8265 nt
NT seq
+upstream
nt +downstream
nt
atgataatgaaaatacagaagaaagaaaaacagctgccgaattttaaagtgttgagtcat
tccccaatgtctgatgcctccatcaccttcgaatgcaagccacagtccccctttgccaac
agcacagaccaggaggatttgcatgacctggtgacaatctctgagttggccagtgtgaac
ctggcccagaaggaccagcaggatgtggtacctgatgtggtacctgccgagattgtgcag
aacatggtgacctcccataatgggatgcaggatgatgggggtgggggcactggggtgaag
aagaaacggaagaaaaaagagctggggcagcaagagctgggtggggaaagagaagtcaaa
ccaaagaggaagagagagcctaaggaaccaaaagaacccaaaaagcccaaggagcccaaa
aagcccaaggagcccaaacaggaaggggccaagaagcccaggaagcctcgggagcccaaa
gccccaaaagagcctaaagacaagaagagcaactcggaatctccccccaaagcaaagccc
aagaagtccagcacggagcaaggaccaactcctgttgagaagaagaaaaaggggaaaagg
aaaaatgacactccagtggaaagcctagagctggagcagagcctcctctccctgtctggg
cagagccctgaggagtctggggaatcagctgacagccagaagcgccgctccggacgccag
gtaaagcgcaggaagtataatgaagacctggatttcaaggtggtggatgatgatggtgaa
acgatagctgtgctgggagctggtcgagcttctgctctttctgcatctaccttggcctgg
caggcagaggagcctcctgaggatgatgctaacatcattgagagaatcctttcgtccagg
atggtgcagaaggagacctaccctggaggcacaacgtatgaacaggaggagttctacgta
aaataccgcaatttttcttacttgcactgtaaatgggctacaatggaggagctggagaaa
gacccacgcatctctcagaagataaaacgcttccgcaataagcaggcccagatgaagcac
attttcaccgagcctgatgaagatctgttcaacccagactatgtggaagtcgatagaatc
ttggaggtggctcacacgaaagactccgacactggggaggaggtgactcactacctggtg
aagtggtgctcgttaccttatgaggaaagcacctgggagctagaggaagatgttgaccct
gggaagatcaaagagtttgagattctacaaatcccaccagaactaaaatccttggaacgt
cctgcctctgaatcctggcaaaagctggagaagtctcgagactataagaacaacaaccag
ctgcgggagtaccagctggagggaatgaattggctgctctttaactggtacaacaggaag
aactgcattctggctgatgaaatgggtctagggaagacaatccagtccattacatacctc
tctgagatttacctgatgggtcttcggggaccattcctcatcattgccccactctccacc
atcacaaactgggagcgggagttccgcacgtggacagagatgaatgccattgtataccat
ggcagccagataagccgccagatgattcagcagtatgaaatggtataccgggacacacag
ggcagtcctcttccagggctcttcaaattccatgtagtaataaccacctttgagatgatc
ttggctgactgcccagagctgaagaagatccagtggcgctgtgtggttattgatgaagcc
catcgtctcaagaataggaactgcaaattactggaagggctgaagctcatgtctctggaa
cataaagtgctgctgactgggacacccctgcagaactcagtagaggaactcttcagcctg
ttgaacttcttggaaccgcaacagttcccatctgagtcagccttcttggaggagtttggg
gaccttaagacagaggagcaggtaaagaagctccagtccctcttgaaacccatgatgctg
cgacggctgaaggatgatgtggagaagaatctagcacccaaacaggagaccattatcgag
gtagagctgactaacatccagaagaaatactatcgggccatcctggagaagaatttcacc
ttcctgtccaagggtgctaaccagcacaacatgcccaacctcatcaacaccatgatggag
cttcgcaagtgctgcaaccacccctacctcatcaatggggcagaggagaagattctggag
gacttccgtaaaacacacagcccagatgctcctgactttcagctgcaggcaatgatccag
gcagcaggcaagctggtcctgatcgataagctgctgccgaagctgattgcaggcgggcac
aaggtgctgatcttctcccagatggtgcgctgccttgatatcctggaggattatctcatc
cacaggcggtacacctatgaacgcattgatggacgggtgcgtgggaatttacgccaagct
gccatagaccgcttttgcaagccggattcagaccgctttgtcttcctgctgtgtacacgg
gcagggggactgggcatcaatcttactgctgcggacacttgcatcatctttgattcagac
tggaatccacagaatgacctgcaggctcaagctcgctgccaccggatagggcaaagcaag
gcagtgaaggtctatcgcctcatcaccaggaattcctatgagcgggagatgtttgataag
gccagcctgaagctgggcttggataaagcagtgctgcaggacatcaaccgcaagggcagc
aacaatggggtgcaacagctctccaaaatggaggtagaggacttgttgcgaaaaggagct
tatggggctctgatggatgaggaagatgaaggctccaagttctgtgaggaagatattgac
caaatcctgcagcgcagaacccaaacaatcacaatccagactgaaggaaagggctccaca
ttctccaaggccagctttgttgcttctggaaacagaactgacatttcgttagatgatccc
aacttctggcagaaatgggcaaaaatagcagaactggatacagacacaaagaatgaaaag
gagagcctagtgattgacaggccccgtgttcgcaagcagaccaaacattacaattccttt
gaggaagatgaacttatggagttctctgagctagatagcgactctgatgagcggcccaca
cgttcaaggcgtctcaatgaaaaaacacgtcgctacttacgggcagagtgtttccgtgtg
gagaagaacctgcttatatttggctggggacggtggaaagacatcttgacccatggccgg
tttaaatggcatctcaatgaaaaagatatggaaatgatttgtcgagcactcctggtctac
tgtgtcagacattataagggagatgagaagattaagagctttatctgggatttgattact
ccgacaaaggatggacagaaccaggccctgcagaaccattcaggcttatcagccccagtg
ccaagggggaggaaggggaagaaaactaagaaccagatgctgctccctgagatcaagaat
gcagattggctcaccacctgcaatcctgagatcgtcctccatgacgacagctacaaaaag
cacctaaagcaacattgtaacaaggtgctgttgcgggtgcggatgctctactatttgaaa
gctgaagtgctgggggaggcagctgacaaagcctttgaaggaacccctgccaaagatctg
gatgtcctgctgccagatattgactatgtggagatccctgtggattggtggaatgctgag
gcagataaatcccttctcattggagttttcaaacatggttatgagcggtacaatgctatg
cgagccgatccagccctctgcttccttgagaaagtaggcatgccagatgagatgctgctg
tctgtggagcagagtgtcattgatggagtgcaggatgccccagaaagagcgaatgtggat
aaagaagagaacagtgcagacaaactggatgggctgcagaagcaggaggagacttcagat
tgtggtgaagttacggagaagaaagataacagcgttgcagcccaggatggctccgaccca
gacaaatccagctggcctgtgtcatctgccctcacagcaaggctgcggcgtctcgtcact
gtttaccagcgctgtaaccgtaaagagctgccatccaggcctgagatcatagggccttgt
aaccatggctattggctacaagaggaaatgttccgaagagccaacgagatggatcctatg
aacaaggaaatgcagaaaagatggaccagaagagagcaggcagatttctaccgcactgtc
tcttcatttggggtcatttatgatccagagaagaagatctttgactggacccagttccga
tccatttcacgtttggagaagaaaactgatgaaagcctagaaaaatatttctacagcttt
gttgccatgtgcaggaatgtctgtcgcttgccccattggaaagaagatggtccagcagat
cctagtatatatgtggaaccaattacagaagaacgtgctgcaaggacactgtaccgaatt
gaactcctacggaagatccgtgagcaagtgttgagatgtccacagctgcatgatcgactc
aaactttgccgtccaagtctataccttcctgtgtggtgggagtgtggcaagcatgaccgg
gatctgttgattggtacggctaaacatgggctgaaccgcacagactattatatcatgaat
gatccccagttgtcatttctggatgcctacagaaattatgctcaacacaaaaggacaggg
gtccttggtgcagagaacttgtgttgtcatcatcaggcaaattctaaactgttttgctcc
ccttcatatagtcaattggaaagaaaacgtgaatctgcagacacagaaactgagaactgc
atgaagctagtgagcacaggcgatggtctctcaaggacagaaagcatttctcaggatgac
agctgtgaaaattttatggctaaagtccggggcatgatttctattaactatgatgagagc
tctttacctgattctctgatgtgcatgatgtatgatgaaaaggcctgcaacagtgagcac
agctccctggctcgtgacagccccagctgcacagacgtcagcagcaatactaccaaaatg
gcagagggcaaaatagatggggatgaagatctgtctagctgtgatgctgagaccacaaga
gagccctccttcttggatcacttgcagctaggcagtgaccaaatggagggtcaaaatgca
gcccaggagccttcgaccaaggagacaaagcccttggagagctttactggggagccctgt
gatacccttcagcacatggagaatcagtatgctagtgcaggatcagtaccatttgaaagg
gatagcatggaaggggtgttaagcataggagtatacagccctagtcttcataactttgat
atcgaagtccaccctgagaagaggttcatgggcttgttgcatgataagggtttggaagag
aaatcagtacagagtcagagccacagtgaggaagaggaagatgaggaggaggaggaggaa
gatgaagatcatttggagacagcagcagatgctgtagaaaatttgagaggctgcctaaag
tctccagatgttgacgaagcccaagctattgtgcaagagggacagaaacatagttcctgt
attctcaataccctggactcattcatggaggaaaggaataaggagccggttgagtcaatc
tcaagtgagcaggcagcatccaaatgtgatagtgagccaggggctggggaggatgatcaa
gctgaatgtgagagccttgaggagcatatgccagccttgcaggagatccaggcctgccat
caccatcactctgcacggggccagggttcagcaattcagatggagctcttaaagacacat
cctatctgcatgaaggtggacctctggggagatgacagtgaggggaagagggacagtcct
gttgttcagcctctctgtgagagtggaataaagagagaggaagatgagtgtgagaaccaa
gacctagagaagagggatgaaatcagccaaaatcaagattgttttgagaagttttccgaa
gatgaaagcaagagctccatgtttgctgtgcctggagagatcgatgaacttcaggatgtc
cgggcacctaccatagctcagcttttgcaggagaagacgctctactctttctcagagtgg
cctaaggaccgagtgatcattaaccgcatagacaacatctgtcatgccatcttaaaaggc
aaatggccttcttccagccagccatctgaaatacaaagcatgatgcccactcctgtgtta
gccagcaatactggcaataggaacagctacaccaattcagaaacctcggagcccagcttc
agtaatggagtgataactacacaggtccaaaaggaaggtttcctggctcccacctttgtc
aaagatgaacacaagcaccagcaaccatatgaatttgagatggagagagatgccaagcag
cggagtcttgaacagctagttgcatcccacccccatccttcaattgtgttaaatggctgg
cgggatgcagcagttgacctctcaagagtggctgatggatccccagcaaatagctctcct
ttcaccttgagcgcaagcatacctaagttagggacagtgaatgccctgcagggttccctt
ggcatggacttgtctggtatccttcaggcaggattaattcatcctgtaacaggacaaatt
gtcaatgggagtctacgaagagatgatgctgccatgagaagaaggcggggcaggagaaaa
aatgtggaagggatagacgtcatattactgaaggaaagaagcctccagaccgggttgccg
gaagatcaaaccctgactgtaccaagtaatatcaaccctgatgggccagacatcactacc
tcaactcagcagacagttccagcccctaatgtccaggcagagaagattgttccaaacaag
agtcttctggactggctgagacagcagtctgactacactcttgaaatccctggctttggc
acaaatttttcagagaagcctaaacagaggaggcagcgctgtaaggaccccagcaaattg
gatattaattctctcacgggggaggagcgagtgcctgtggtccataagggtacaggacga
cgattaggaggagctatggcaccagcattgaaggaattgccaaggtggcttgatgcaaat
atggagtatgctgttgcagcagactggtctgacattgttaaactttcagggttcttacct
gaaagcaagtttaatcgtattctcactgaacctgtactccgagatgctgggcctcgacgg
agaggaaggaggccaagaagtgaactttttaaaactcctggcatagtagcagatgcttct
tctggaattggaccattattcatgaatggacttattgctggaatggatttagtaggactc
cagaatatgagaaacatgcaaggcattcctttaactgggctggttgggtttcctgctgga
tttgcagcaatgcctgctggtgaggatgtcaaaagcactctaagtatgttgccgatgatg
ctgccaggcatggctgctgtaccacagatgtttggtgttggaggacttctcaatccatca
atggcaacgacttgtacgtcaactgctcccacttcattagcaagcacaaccaaaagtggt
acatctcattcagaaaaggatgctgaagagaaacagagtgacccagatgcaaaaacagaa
actctttctgaagacaaatctggtcctagttcattttctgatcagtcggaacctgcaata
actgccagtaatccagtagcttttaacccatttcttattccaggaatgtcatctggactg
atctatccctcaatgtttctttctcctggtattggcatggcattgccaagccttcagcaa
accagacattcagaggtaacaaacctagaaagccagaaacgcaaaagaaagaaaactaaa
ggggagttagcaaatccagaaccagaaactcttttgctgtctgacaaggaacatgcaaac
aatcaaaactgtactgaacaaacaccatctgtgtcagcagaaaatgaacatcatgtacca
gcagaggagaaagagaagttgagagaaattaaagataccaattag
DBGET
integrated database retrieval system
