Hemicordylus capensis (graceful crag lizard): 128322976
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Entry
128322976 CDS
T08891
Symbol
SOX13
Name
(RefSeq) transcription factor SOX-13 isoform X1
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hcg03000
]
128322976 (SOX13)
Transcription factors [BR:
hcg03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
128322976 (SOX13)
BRITE hierarchy
SSDB
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
128322976
NCBI-ProteinID:
XP_053101337
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All DBs
Position
4:complement(69814277..69963717)
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AA seq
625 aa
AA seq
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MSMRSPASPQLELNGAGNMVNCTIKTEEKSETCYKSIQQEATSTISGSDKPYKSPLPLSE
VIDPQTLPEESGSPGGKALDSKNPVFEPAVSNREKLDFNKNLKEVMPTIEKLLSSDWKER
LLGKNSVESKEVKGTQESLAEKELQLLVMINQLSTLRDQLLTAHSEQKNMAAMLFEKQQQ
QMELARQQQEQIAKQQQQLIQQQHKINLLQQQIQQVNMPYVMIPAFPPSHQPLPVTSDPQ
MALPIQPIPCKPGMKRPRKVWNLEYPMQLLHSPPPSSLKRPASSGHLQIQESSQPLNLTA
KPKGSELPNASSSPSLKISSCQSLTPNHGVSRELQTSPPSLPLGFLGEGDAITKAIQDAR
QLLHNQSRAIDGSPNHPYRKDHVSLDSSPAKEQMEETSLQRLDESMLTCDGDGSQHFPES
RNNNHIKRPMNAFMVWAKDERRKILQAFPDMHNSSISKILGSRWKSMSNQEKQPYYEEQA
RLSRQHLEKYPNYKYKPRPKRTCIVEGKRLRVGEYKALMRNRRQDARQGYLIAPQGSQMP
PSSTDLVYQRSVGMQLPPPLMDHYLPRSMESNMPVIVNTRSLKPEEGDGAEDSHSVPDGE
MYHYSEDEDSEGEDKSDGELVVLTD
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgtccatgaggagccctgcctctcctcagctggagctcaatggagctgggaacatggtg
aactgcaccattaaaacagaagagaagagtgagacctgctacaagtctatacagcaggag
gcaaccagcactatctctggttctgacaaaccatacaaatcaccattgccactgagtgaa
gtcatagatccgcagaccctcccagaggaatctggatctccagggggaaaagcattagat
tccaagaaccctgtgtttgagcctgcagttagcaaccgggaaaaattggattttaataaa
aacttaaaagaagtgatgccgactattgagaagttattgtccagtgactggaaagagaga
cttctggggaaaaattctgtggaatccaaagaggtcaaaggaacccaagaaagcctggca
gagaaggagctgcagctcctggtcatgattaaccagctgtccaccttgcgggaccagctg
ctgacagcccattcggagcagaagaacatggccgctatgctgtttgagaaacagcaacaa
cagatggaactggccaggcagcagcaagagcagattgccaagcaacagcaacagcttatc
cagcagcaacacaagatcaacctgttgcagcagcagatccagcaggtcaacatgccctat
gtaatgattccagcctttcctcccagccaccagcctcttcctgtcacctcagatcctcaa
atggcacttcccattcagccaattccctgtaaaccaggtatgaagaggccaagaaaagtg
tggaatttggagtaccccatgcagctgctgcacagcccacctccttcgtcactgaagaga
cctgcaagctcaggccacctacagatccaggaatcttcgcaaccgctgaacttaacagcc
aagcccaaaggctctgagctccccaatgcctccagctctcctagtctaaagatcagtagc
tgtcagtccctcactcccaaccatggagtttctcgagagctccagaccagccctcccagc
cttcctttggggttccttggagagggagatgctataaccaaagcaatccaggatgcacgg
cagcttctgcacaaccaaagcagggcaatagatggttctccaaatcacccctacaggaag
gaccatgtcagcttggattcttcaccagcaaaagaacagatggaggaaacatctttgcag
aggctggatgaatccatgttaacctgtgatggggatggctcacagcatttccctgaatcc
aggaacaacaaccacataaaacgccccatgaatgccttcatggtatgggccaaggatgag
agacgcaagatcttgcaggccttcccagacatgcacaactcaagcatcagcaagattcta
ggctcccggtggaagtccatgtcgaaccaggagaagcagccctactatgaggagcaggcg
cgactcagccggcagcacctggagaagtatcccaattacaagtacaagccccgccccaag
cgcacctgcatcgtggaagggaagcggctccgtgtaggcgaatacaaggcattgatgagg
aaccggcgccaggacgccaggcagggctacctgattgcgcctcagggcagccagatgcca
ccttcctctacggatctcgtgtatcagcgatcggtcgggatgcaactgcctccacccctg
atggatcactacttgccccgcagcatggaatcaaacatgccggtcatagtcaacacacgt
agcctgaagccggaagaaggggacggggctgaggacagtcactcagtacctgatggggag
atgtaccactacagtgaagatgaggattcggagggcgaggataagagtgatggagagctg
gtggttctgacagattaa
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