Hemicordylus capensis (graceful crag lizard): 128323089
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Entry
128323089 CDS
T08891
Symbol
SCRIB
Name
(RefSeq) protein scribble homolog isoform X1
KO
K16175
protein scribble
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Pathway
hcg04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
128323089 (SCRIB)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
LRR_8
LRR_14
LRR_4
PDZ_2
LRR_1
LRR_13
LRR_9
LRR_LRWD1
Pept_S41_N_bact
Motif
Other DBs
NCBI-GeneID:
128323089
NCBI-ProteinID:
XP_053101702
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All DBs
Position
4:322105174..322216256
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AA seq
1966 aa
AA seq
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MLRCMPPLWRCNRQVEVVDRRRCSLQAVPDDVYRHSRSLEELLLDGNQLRELPKPFFRLL
NLRKLGLSDNEIQRLPPEVANFMQLVELDISRNDIPEIPESIKFCKSLEIADFSGNPLSR
LPEGFTQLRSLSHLALNDVSLQSLPSDIGNLANLVTLELRENLLKALPASLSFLVKLEQL
DLGGNDLEVLPDTLGALPNLRELWLDRNQLSSLPPELGNLRRLVCLDVSENKLEQLPDEI
SGLGALTDLLLSQNLLETLPDGVGQLKQLSILKVDQNRLVEMTEAIGDCENLSEIILTEN
LLMALPKALGKLTKLTNLNVDRNRLMALPPEIGGCGSLNVLSLRDNRLEFLPPELASTTE
LHVLNVAGNRLQHLPFALTNLNLKALWLAENQSQSMLKFQTEEDEKTGEKVLTCYLLPQQ
PSPSLENLLQNSVDDSWADSNLNRVSVIQFEDDPKGGEEEEEEEEDAGAEKRQGLQRRAT
PHPSELKFLKKKVMAVRLGEAGTAKLGAAERDSAGTEEKRLSATSNHSEDTGSTVSASCQ
EEEEGIGASPEDMEERRRRQEAAAAETAAQEDELEVEYNEPTVHFAEDTLVRSEEEEEED
EERPFPVGKQRLIRKDTPHYKKHFRIAQLPRPEAVVALLQGLSADGTPQEAAEEEEEEET
AVERTEWAGEASNGTPAVPPSVKGVSFDQANNLLIEPARIEEEELTLTIVRQTAGLGISI
AGGRGSTPYKGDDEGIFISRVSEEGPAARAGVRVGDKLLEVNGVLLHCAEHHVAVEALRG
SGSTVAMTVLRERMVEPENAITVTPLRPEHDYSPRERREGLRFPERPEGAPLAERLSACL
MRNERGLGFSIAGGKGSTPYRPGDMGIFISRIAEGGAAHRDGTLCVGDRVLLINGVDMTE
ARHDQAVALLTAASPTIALLVEREAAAATTAAQPGEEIVPLGQRARVHSPPPPPAAPPGH
GESLPEETSLPPKGHLLPPNLESPYPVEEVCLVKAGGPLGLSIVGGSDHSSHPFGIREPG
VFISKVIPQGLAARSGLRVGDRILEVNGIPLRHATHQEAVSALLSSTQELRMAVRRDPPP
PGMEEICLEKRPGEKLGISIRGGAKGHAGNPFDPTDEGIFISKVSSSGAAARDGRLKVGL
RILEVNHQSLLGMTHTEAVQVLRGVGDVLLVLVCDGFDPKAVAALEASPGIIANPFAAGL
GRKNSLESISSIDRDLSPEELDILQKEMEMVRETAQWEREELEKVERRRREREAATQLLA
AAVEEEAAEAAAEDPGTEPLRLDYRTLAALPSSGLQRPNRHLSHPAMDRDLPSPLLPAET
PLILRSGPGTLSRASLSVGEAARGAQPEQACARGLEEESSVDSQPIPFSANPFVVANRQG
KAALGGPPLGYGQSGVLKTSLYAKALAGESELGAARRESPGSQQASIHFVPLHAESQSTK
PGVIQPLARARPAPALAASEGRDSPNPFQPPELCPGSHSSPRTAGPPSLDEASVSAKQAY
KALAAVPVAHLFLQPEEQTESLGAPVEVGGGRPGSPGGRPPAPLGPPRALLLTPQAPSPG
GLHSPEQRSFRERQKYFEVELQQPPLAEKPPKRVSLVGEEDLKKMKEEEARKLQQKRAQL
LEEEEEEEEEEGADVGTQPLETRAPSSIFIEGVEYKVEKLDGRRPPSAAAWPSRALGAST
RSAEPERPPGCQRDSLEEALRPELPSTPMSGPSPALPRGGEVGAPVRTAKAERRHQERLR
MQSPELLSAQEKDLSPAERRALEAEKRAMWRAARSSTLEESIKQYEQDLARRLYQARQQA
PGQGPASRGQPRMKSLEQDALKAQMVIAKSKEGKKRSTLEQLAESPSPAPTPSPTPLEDC
SSRMMASPGRLSVPEKKFLYREFAAIPSSKPVYEIQTPDGGDSCRLLSYASSPASPRQEG
PAVDRELLVAHDPPTPSASPCEEMGLFGGKRKLRHAQPSLEAAVPT
NT seq
5901 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgctgcatgcccccgctgtggcgctgcaaccggcaggtggaggtggtggaccgg
cggcgctgctcgctccaggccgtgccggacgacgtctaccgccacagccgctccctcgag
gagctcctgctcgacggtaaccagctccgcgaactccccaagcctttcttccgtctgttg
aacctgcgcaagctgggcctgagcgacaatgagatccagcggctgcccccggaggtggcc
aacttcatgcagctggtggagctggacatctcccgcaatgacatcccggaaatccccgag
agcatcaagttctgcaagtccctggagattgcggacttcagcggcaaccccttgtctaga
ctcccggagggcttcacccagctacgcagcctgagtcatctggccttgaacgacgtctcc
ctgcagagcctgcccagcgacattggcaatctggccaacctggtgaccttggagctgcgt
gagaacctgctcaaagctctgccagcatcgctttccttcctggtcaagttagagcagctg
gacctcgggggcaatgacctggaggtgctgccagacacgctgggcgcactgccgaatctg
cgggagctgtggctagacaggaaccagctgtcgtctctgcccccggagctgggcaatctc
cgccgcctggtgtgcctggatgtctctgagaacaagctggagcagctgcctgacgagatc
agcggcttgggggccctgaccgacctcctgctctcgcagaaccttctggagacgcttccg
gacggggttggccagctgaagcagctctccatcctgaaggtggatcagaaccggctggtg
gagatgacagaggccatcggggactgcgagaacctctcggagatcatcctcacggagaac
ctgctgatggccctgcccaaggcgctggggaaactcaccaagctgaccaacctcaacgtg
gaccggaatcgactgatggcactccccccagagattgggggctgtggcagcctgaacgtg
ctctcgctgcgggacaaccgcctggagttcctgccccctgagcttgccagcaccaccgag
ttgcatgtgctgaatgtggcaggcaacaggctgcagcacctgccctttgccctgaccaac
ctcaacctgaaggcgctctggctggcggagaaccagtcccagtcgatgctgaagttccag
acggaggaagatgagaagacgggggagaaagtcctcacctgctacctccttccccagcag
ccgtcccccagcctagagaatctcctgcagaacagcgtggacgacagctgggcagacagc
aacctcaaccgggtcagcgtgatccagtttgaggatgaccccaaagggggtgaggaggag
gaggaggaggaggaggatgctggggccgagaagaggcagggtcttcagcgcagggcaacg
ccccaccccagcgagctgaagttcctgaagaagaaggtgatggccgtgcggctcggcgag
gccggtactgccaagctgggggcagctgagcgcgactccgccggcacggaggagaagagg
ctgagcgccacctccaaccacagcgaggacaccggcagcaccgtctctgccagctgccag
gaggaggaggaggggatcggggccagccctgaggacatggaagagaggcggcggcggcag
gaggcagcggcagcggaaacagccgcccaggaggacgaactggaggtggagtacaacgag
cccacggtgcattttgctgaggacacgctggtccggagcgaggaggaggaggaggaggac
gaagagcgcccgttcccagtggggaagcagcggctgatccgcaaggatacaccccactac
aagaagcacttccggatcgctcagttgcctcgccccgaggcagtggtggcccttctgcag
gggctgagtgctgatgggaccccccaggaggcagcggaggaggaggaggaggaggagacg
gcagtggagaggactgagtgggctggagaggccagcaatgggaccccagcagttccaccc
tcggtcaagggggtgtcgtttgatcaagccaataatctgctgattgagcctgctcgcatt
gaggaggaagagctgacgctgaccattgtgcggcagacggcggggctgggcatcagcatt
gccggaggcagaggctccacgccctacaagggagacgacgagggcatcttcatttcccgc
gtgtcggaggagggtccggctgcccgcgcaggtgtgcgtgtcggggacaagctcctagag
gtgaacggcgtgctcctgcactgcgctgagcaccacgtggctgtggaggcgctccggggc
tcaggcagcacggtcgccatgacggtgctgcgggagcggatggtggaacccgagaacgcc
atcacggtgaccccgctgcggccagagcacgactacagcccgcgggagcgccgggagggc
ctgcgcttccccgaacggcccgagggggcaccgcttgccgagagactctccgcctgcctg
atgcggaacgagaggggcctgggcttcagcatcgctgggggaaagggctccacgccctac
cgtcctggggacatggggatcttcatctcccggattgcagagggcggggcagcccaccgt
gacgggaccttgtgtgtaggcgaccgggtcctcctgatcaatggggtagacatgacagaa
gccaggcatgatcaggccgtagcgctgcttaccgccgcctcccccaccattgccctgctt
gtggagagagaagctgccgctgccaccaccgctgctcagcccggtgaggagatcgtgccc
ctagggcagcgagcccgggtgcactcacccccaccaccaccagcagccccccccggccat
ggggagagcctgcctgaggagacgtccctgcccccaaagggccacctcctgcccccaaac
ctggagagcccgtaccccgtcgaggaggtgtgtctggtcaaagccgggggcccccttggg
ctcagcattgtagggggcagcgaccactccagccacccctttgggatccgcgagccaggg
gtcttcatttccaaggtcattccgcagggactggcagcccgcagtgggctgcgtgttggc
gacaggatcctggaggtgaacggcatccccctccgccacgccacgcaccaggaggcggtg
agcgccctgctgtccagcacgcaggagctgaggatggcggtcaggcgagaccctccccca
cctggcatggaggagatctgccttgaaaagaggcccggggagaagctgggcatcagcatc
cgaggcggtgccaagggccacgcgggcaacccctttgaccccacggacgagggcatcttc
atctccaaggtcagctcctcgggggctgcagcccgggacggccggctgaaggtgggcctg
cgcatcctggaggtgaaccaccagagcctcctgggcatgacgcacaccgaagcggtccag
gtgctgcgtggggtgggcgatgtgctgctggtgctggtctgcgatggctttgaccccaag
gcggtggccgccctagaggcgtctccagggatcattgctaacccctttgcggccggcctt
gggcggaagaacagcttggagagcatttcatccattgaccgggacctcagtccagaggag
ctggacatcctccagaaggagatggagatggtgagggagacggcccagtgggagagggaa
gagctggagaaagtggagcggaggcgccgggagcgggaggcggccacgcagctcctggca
gcagccgtggaggaggaggcggccgaggcggcggcagaggaccccggcacagagcccctg
cggctggactaccgcaccctggcagcactgcccagcagcggcctgcagagacccaaccgt
catctttcccatcctgccatggacagggacttgccgtcgcctctcctccctgcagagact
ccgctcatcctccgctcaggccctggaacgctgagcagagcttctctctcggtgggagag
gctgcccgcggggcccagcctgagcaagcgtgtgcccggggtctggaggaggagagctct
gtggactcccagcccatccccttcagcgccaacccctttgtggtggcaaatcgacaaggc
aaggctgccttggggggccctccccttggctatggccagagcggggtgctgaagaccagc
ctctatgccaaggctctggcgggggaaagtgaactgggagccgcccggcgggagtcccct
ggcagccagcaggcgtccatccatttcgtccccctccacgcggagagccagtcgaccaag
cccggggtgatccagcccctcgcccgtgcccggccagccccagctttggctgcctccgaa
ggccgagacagccccaatcccttccagccccctgagctgtgccccggcagccacagttct
cctcggaccgccgggcctccttccctcgacgaggcctcggtcagtgccaagcaggcctac
aaggcgctcgcagcggtgcccgtggcacatctcttcctgcagccggaggagcagaccgag
agcctgggggcccccgtggaggtgggggggggccgtcctgggtccccaggagggaggcct
cccgcccccctgggcccccccagagctcttttgctgacgccgcaggcgccgtctcccgga
ggcctgcacagccccgagcagaggtccttccgcgagaggcagaagtatttcgaggtggag
ttgcagcagccgccgctggccgagaagccccccaagcgggtgtcgctggtgggggaagaa
gacctgaagaaaatgaaggaggaggaagctcgcaaactgcagcagaaacgagcccagctg
ctggaggaggaggaggaagaggaggaggaagagggggcagatgtggggacgcagcccctg
gagaccagggccccctccagcatcttcattgagggggtcgagtacaaggtggagaagctg
gacgggaggcggccaccatccgcagccgcttggccttctagagctcttggtgcttccacc
aggtccgccgagcccgagaggccccccggctgccagagggactccctggaggaggccctg
aggccagagctgccatccacgcccatgtctgggcccagcccagccctccccagagggggt
gaagtgggggccccggtgaggactgccaaagccgagcggcggcaccaggagcgcctgcgg
atgcagagccccgagctcctcagcgcccaggagaaggatctttccccggccgagcggcgg
gccctggaagcggagaagcgggccatgtggcgggcagcacgctcttccactctagaagag
agcattaaacagtacgagcaagacctggccaggaggctgtaccaggcccggcagcaggca
cccgggcagggccctgcctcaagaggccaacccaggatgaagtctctggagcaggacgca
ctcaaggcccagatggtgattgccaagtccaaggaggggaagaagcgcagcaccctggag
cagctggccgagtcgccctccccggcccccacgccctcccccacccccctggaggactgc
agttcccggatgatggcttccccaggcaggctgtctgtgcctgaaaagaagtttctctac
agggaatttgctgccattccttcctccaaaccagtttatgaaatccagactccggatggc
ggggactcctgtagacttctcagctacgccagcagcccagcgagccccaggcaagagggc
ccagcggtggaccgggagctcctcgtggcacacgacccccccacccccagcgcctccccc
tgtgaagagatggggctctttggcggcaagcgcaaactccggcacgcgcagcccagcctg
gaagcggcagtgcccacataa
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