Hemicordylus capensis (graceful crag lizard): 128323321
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Entry
128323321 CDS
T08891
Symbol
CHD7
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 7 isoform X1
KO
K14437
chromodomain-helicase-DNA-binding protein 7 [EC:5.6.2.-]
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hcg03036
]
128323321 (CHD7)
Chromosome and associated proteins [BR:
hcg03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
128323321 (CHD7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Chromo
Helicase_C
ResIII
DEAD
HTH_Hrp3
HDA2-3
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
128323321
NCBI-ProteinID:
XP_053102175
LinkDB
All DBs
Position
4:262690085..262982676
Genome browser
AA seq
3005 aa
AA seq
DB search
MADPGMMSLFGEDGNIFSEGLEGLGECGYPENTVNPMGQQIPIDQGFASLQSPLHHPSTS
QNQAKLTHFDHYNQYEQQKMHLMDQPNRMMSNAPGNGIASPHSQYHNPPVPHSGGTGGQM
GVYPGMQNERHGQPFVDGSSMWGSRAVQVQDQIRAPYHQQQPPSAQPPPPAPSGPPGQGH
PQHIQQMGNYMARGDFSMQQHGQPQQQRMNQFSQSQEGLNQGNPFIATSGPGHMSHVPQQ
NPSMGPSLRHSVQQFHHHPPTALHGESVAHSPRFSPNPPQQGAVRPQTLNFSSRGQTVPS
PTINNSGQYSRYPYSNLNQGLVNNTGMNQNLGLTNNTPMNQSVPRYPNAVGFPSNSGQGL
MHQQPLHPSGSLNQMNTQAMHPSQPQGTYASPPPMSPMKAMSNPAGTPPPQVRPGSAGIP
MEVGSYPNMPHPQPSHQPPGAMGIGQRSMGPRNIQQNRPFMGMSSAPREMGGHMRPNGCP
GVGLADPQAIQERLISGQQHPSQTSFQQQMPTCPPMQPHPGIHHQSSPPPHPHHQPWAQL
HQSPQNTPQKVPVLQHSPSEPFLEKSVPDMTQVSGPNAQLLKSDDYLPSIEQQPQQKKKK
KKNNHIVAEGPSKGFGKEGFPCGVDNQDPTRKPLDCSQEEKKKKKKPKVKKEPKDPKEPK
EKKEPKEPKTPKTPKIPKEPKEKKAKNTTPKPKANKKASNKKPESESSAVKKKVNKGKEG
SEISDLEKTPPGSPHPEEEDDAGIQKRRSSRQVKRKRYTEDLEFKISDEEPDDADAAGRN
SPSNTSQSEQQESADAEGPVVEKIMSSRTVKKQMESGEELEAEEFYVKYKNFSYLHCQWA
SVEVLDKDRRIQQKIKRFKAKQSQNKFLSEIDDELFNPDYVEVDRIMDISHSKDDNGEPV
THYLVKWCSLPYEDSTWELKQDIDQVKIEEFEKLMSREPETERVERPPADDWKKSESSRE
YKNNNKLREYQLEGVNWLLFNWYNTRNCILADEMGLGKTIQSITFLYEIYLKGIHGPFLV
IAPLSTIPNWEREFRTWTELNVVVYHGSQASRRTIQSYEMYFKDPQGRAIKGSYKFHAII
TTFEMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTV
EELFSLLHFLEPSRFPSETTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPK
EETIIEVELTNIQKKYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGA
EEKILEEFKETHNPDSPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDI
LEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSRPDSDRFVFLLCTRAGGLGINLTAADTC
IIFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQS
MSGRENATNGVQQLSKKEIEDLLRKGAYGALMDEEDEGSKFCEEDIDQILLRRTHTITIE
SEGKGSTFAKASFVASGNRTDISLDDPNFWQKWAKKAELDIDALNGRNNLVIDTPRVRKQ
TRLYSAVKDDELMEFSDLESDSEEKPNIKPRRPQDKSQGYARSECFRVEKNLLVYGWGRW
TDILSHGRYKRQLTEQDVETICRTILVYCLNHYKGDENIKSFIWDLITPTVDGQTRALVN
HSGLSAPVPRGRKGKKVKAQSSQPVLQNADWLASCNPDALFQEDSYKKHLKHHCNKVLLR
VRMLYYLRQEVIGDQADKILEGADSSEVDIWIPEPFHAEVPTDWWDKEADKSLLIGVFKH
GYEKYNSMRADSTLCFLERVGMPDAKAIAAEQRGTDMLTDGGDGGDFDREDEDPEYKPTR
APFKDEIDEFANSPSDKEESIELHTSKHSESNADFGQLYWPNTSTLTTRLRRLITAYQRS
YKRQQMRQEALMKTDRRRRRPREEVRALEAEREAIITEKRQKWTRREEADFYRVVSTFGV
IFDPIKQQFDWNQFRAFARLDKKSDESLEKYFNCFVAMCRRVCRMPAKPEEEPPDLSTVI
EPITEERASRTLYRIELLRKVREQVLHHPQLAERLTLCQPSLDLPEWWECGKHDKDLLIG
AAKHGVSRTDYHILNDPELSFLDSHKNFAQNRGGGNLNALSLLNPLGVCCSQSASIIPST
PAPDEKTAEQAEVKLEGPEKTSAKEKFDSKEDEEATDVAVKDKEECEAEAGPVKCEIKDI
ELSTEVDPKSISEKGSEDDEEEKLDDDDKSEESSQPEAGTISQGKNFDEESNASLSTARD
ETRDGFYMEDGDPSVAQLLHERTFAFSFWPKDRVMINRLDNICEAVLKGKWPVNRRQMFD
FQGLIPGYTPTAVDSPLQKRSFAELSMVGQANISGNEDITVSPQLSKENALNLSVPRQRR
RRRRKIEIEAERAAKRRNLMEMVAQLRESQVVSENGQEKIVDLSKASREAPSSTSTFSAV
PSKFLLPNVSTPVSDAFKTQMELLQAGLSRTPTRHLLNGSLIDVEPPMKRRRGRRKNVEG
LDLLFMSNKRASLMAEDAEVTKAFDEEIETPPSRNIPSPGQLDPDTHIPVINIEDGTRLV
GEDAPKNKDLVEWLKLHPTYTVDMPSYVPKSADVLFSPFQKPKQKRHRCRNPNKLDINTL
TGEERVPVVNKRNGKKMGGAMAPPMKDLPRWLEENPEFAVAPDWTDIVKQSGFVPESMFD
RLLTGPVVREEGASRRGRRPKSEIAKAAAAAAAVASTSGINPLLMNSLFPGMDLTSLQNL
QNLQSLQLAGLMGFPPGLATAAAAGGDSKNPAAMLSLMMPGMGGLPNMFGLSGLLNNPIT
AASGNTTMASSQGETEDGTSKVEEKKTENEEENKDSEKSTDTVSATDSANGSASATAAAA
AATTTTTNTGLPANPLTFNPFLLSAMSPGLFYPSMFLPPGLGGLTLPGFPALAGLQNAVG
SSEVKVTDKTEGAAFKDEENLEGSDAEESLDKTADSSALEDEIAQGEELDSLDGGDEIEN
NENDE
NT seq
9018 nt
NT seq
+upstream
nt +downstream
nt
atggcagatccaggaatgatgagtctgtttggagaagatgggaatattttcagtgaggga
ctggagggtcttggggaatgtggataccctgaaaacacagtaaaccctatggggcaacaa
atacctattgatcaaggatttgcctcattacagtcaccccttcaccatccttcaaccagt
caaaatcaagcaaagctgacccacttcgatcactataatcaatatgaacagcagaaaatg
catctgatggatcaaccaaacagaatgatgagtaatgctcctgggaatggtatagcatct
cctcactctcagtatcataatcctccagttcctcacagtgggggtactggtggtcagatg
ggagtctaccctggtatgcagaatgaaaggcatggacaaccctttgtagatggcagttcc
atgtgggggtcacgggcagttcaagtgcaagatcaaataagagcaccataccaccagcag
caacccccatctgctcagccaccaccaccagcgccatcaggaccccctgggcaggggcat
cctcagcacatacaacagatgggaaattatatggctcgtggtgacttttcaatgcaacag
catggtcagccacaacagcagaggatgaaccagttttctcaaagccaggaaggtcttaat
cagggaaatcctttcattgccacctcaggacctggccacatgtctcatgtgccccagcag
aatccaagcatggggccttctttacgacattcagtgcagcaatttcaccaccatcctccc
actgctctccatggagaatcagtagcccacagtcccagattctcccctaaccctcctcag
cagggtgctgttaggccacaaacacttaattttagttctcggggccagacagtaccttca
cctactataaacaactcagggcagtattctcgttatccttatagtaaccttaatcaggga
ttagtaaacaatacagggatgaatcagaatttaggccttacaaataacactccaatgaat
cagtctgtaccaaggtacccaaatgccgtagggtttccatcgaacagtggtcaaggacta
atgcaccagcagccccttcaccctagtggctcacttaaccaaatgaacacccaagctatg
cacccttcacagcctcagggaacctatgcttctccacctcccatgtcacctatgaaagca
atgagtaatccagcaggtacccctcctccacaggttaggcctggtagtgctggaatacca
atggaagttggcagttatccaaatatgccccatcctcagccatctcaccagccacctggt
gccatgggaattggacagaggagtatgggccctcggaatatacaacagaaccggccattt
atgggtatgtcttcagcaccgcgggaaatgggtggtcacatgagaccaaatggctgtcca
ggtgttggccttgctgatccacaagcaatacaagaacgattgatatctggtcagcagcat
cccagtcagacatcttttcaacagcaaatgccaacgtgtcctcccatgcagcctcatcca
ggcattcatcatcagtcttcaccgccaccacatccccaccatcagccttgggcgcagctt
caccagtcaccacagaatacgccacaaaaagtgcctgtccttcagcattctccatcagaa
cccttcttagagaaatcagtgccagacatgactcaggttagtggaccgaatgcccagcta
ctgaaaagtgatgattaccttccatcaattgaacagcagccacagcagaagaaaaagaaa
aagaaaaacaaccacatagttgcagaaggtcccagtaaaggttttggtaaggaaggcttt
ccctgtggggttgacaaccaggatcctaccaggaaaccactggactgttcccaagaagag
aaaaagaaaaagaaaaaacctaaggtgaaaaaagagccgaaggatccgaaagaacccaag
gagaagaaggagcctaaggaacccaagactcccaaaacccctaagattccaaaagagcca
aaggaaaagaaagcaaaaaacaccacaccaaaacccaaggccaacaaaaaggcaagtaac
aagaaaccagaatcagaatccagtgctgtgaagaaaaaggtcaacaaaggaaaagaaggt
tctgaaatatcagatttagaaaaaacaccaccaggctcaccccatcctgaggaggaagat
gatgcaggaattcagaagaggcgctctagcagacaggttaaaagaaagcgttacacagaa
gacctggagttcaagatttctgatgaagaacctgatgatgcagatgctgctggaagaaac
tccccttcaaatacctctcagtctgagcaacaggaatctgctgatgctgaaggccctgta
gtagagaaaataatgagtagccgcacagtcaagaaacagatggagagtggagaggagtta
gaagctgaagaattctatgtaaaatacaaaaacttctcttatcttcactgtcagtgggca
tctgtggaagtgctggacaaagacaggagaattcagcaaaagattaagagatttaaagca
aagcagagccaaaataagttcctttcggagattgatgatgaactttttaatcccgattat
gttgaagttgatcgcataatggatatttcacatagcaaggatgataatggagagcctgtg
actcattatttggtgaaatggtgttcacttccgtatgaagacagcacgtgggaattaaag
caagacatagaccaagttaagattgaagaatttgagaaactaatgtctagggagccagaa
acagaacgtgtggagcgacctcctgctgatgactggaagaagtcggagagttccagggag
tataaaaataacaacaaactcagggaataccagttggaaggagtaaattggcttcttttc
aattggtacaacacgcgaaactgcattttagcagatgaaatgggattggggaaaactatc
caatcaattacatttctctatgagatatatttgaaaggaatccatggtccttttttggtt
attgccccattgtccacaattcctaactgggaaagggaattccgtacctggacagaattg
aatgttgttgtttatcatgggagtcaagccagcagacggaccattcagtcgtatgaaatg
tacttcaaagacccacagggtcgtgcaattaaggggtcatacaaatttcatgccatcatc
actacatttgaaatgattttgactgattgtcccgagctccgtaacattccatggcgctgt
gtggtgattgatgaagcccacaggcttaagaacagaaattgcaagctactggaaggcctg
aagatgatggacctggaacacaaggtgcttcttacaggtactcctttacaaaatactgtg
gaagagctcttcagcttgcttcatttcttggaaccaagtcgtttcccttcagaaaccact
ttcatgcaggaatttggtgatctaaaaactgaagaacaggtgcaaaaactccaagctatc
cttaagccaatgatgctgagacgcctcaaagaagatgtggaaaagaacctggctcccaag
gaagaaactatcattgaggttgaattgacaaacattcagaagaaatactacagagctatt
ctagaaaagaatttcacctttctgtcaaaaggtggtggccaggcgaatgtacctaatctc
ttaaacactatgatggaattacgaaagtgctgcaatcatccataccttataaatggtgct
gaagagaaaattttggaagagtttaaagaaacacacaatcccgactctccagattttcag
ctccaggcaatgatccaggctgctggcaagctagtactgattgacaagttgctgccaaaa
ttgaaggctggtggccacagggtgcttatcttttcccagatggtgcgctgcttggacata
ctggaagactacctcattcagagacggtatccatatgaacggattgatggcagagtaaga
ggcaacctccgtcaagcagctattgataggttttccaggcctgattctgacagatttgtt
tttctactgtgtacaagagccggtggtttgggaattaatcttactgctgctgatacctgc
atcatctttgattcagattggaaccctcaaaatgatcttcaggcccaagctcgatgtcac
aggataggacagagcaaatcggtgaagatatataggttgataacaaggaattcttatgaa
cgggaaatgtttgacaaagcaagtttaaaacttggtcttgataaagctgtgcttcagtcc
atgagtggaagagagaatgctaccaatggggtacaacagctttctaaaaaagaaatagaa
gatcttttgcggaaaggggcttatggtgctctaatggatgaagaagatgaaggctccaaa
ttttgtgaggaagatattgatcagattcttttgaggcggacacacacaataacaattgaa
tccgaggggaaaggctctacgtttgcaaaggctagttttgtagcatctggtaacagaaca
gacatttctttggatgatcctaacttctggcaaaagtgggcaaaaaaagctgagttggac
attgatgccttaaatggaaggaacaacctagttattgatactccaagggtaaggaagcaa
actagactatacagtgcagtcaaagacgatgaactgatggaattttcagacctggaaagt
gattctgaagaaaagcccaatataaaaccccgtaggccacaggataaatcccagggttat
gcaagaagtgaatgttttcgggtagaaaagaatctcttggtttatggctggggacggtgg
actgatatcctctcacatggtcgctataaacgtcaactaacagaacaagatgtggaaacc
atctgccggactatccttgtgtattgtcttaatcattacaaaggggatgaaaacatcaaa
agttttatttgggatctgatcactccaactgtggatggacaaacgcgagccttagttaat
cattctggcttgtctgctccagtgcccagaggaagaaaaggtaaaaaagtgaaagctcag
agttcacaaccagttctacagaatgctgactggctagcaagctgtaacccagatgccttg
tttcaggaggacagctataagaaacacctcaagcaccactgtaacaaggtcctgctgcgt
gtccgcatgctgtactatctgaggcaagaagttataggggaccaagctgacaagatcttg
gagggtgctgactcaagtgaggtagatatctggattcctgagccatttcatgctgaagtt
cctacagactggtgggataaggaagcagataaatcccttttaattggcgtgttcaaacat
ggctatgagaagtacaattcgatgagagcagactctactctgtgctttctggaacgtgtt
ggtatgcctgatgccaaggccatagctgctgaacagagagggacagatatgttaacagat
ggtggtgatggaggcgactttgacagagaagatgaagatccagaatataaaccaaccagg
gctccattcaaggatgaaattgatgaatttgcaaactcgccttctgacaaggaagaatcc
atagagcttcacacaagcaagcatagtgaaagtaatgctgattttggccaactctactgg
cctaacacttcaaccctaactactcgcttgcgccgcctcattactgcttatcagcgtagc
tataaaaggcaacaaatgaggcaagaggcactaatgaagactgaccggcgccggcggcga
cctcgtgaagaagtgagagcactagaagctgaaagagaagctataataacggaaaaacgt
caaaaatggacaagaagagaggaagcagatttttatcgtgtggtttctacttttggggtt
atttttgaccctataaagcaacaatttgattggaaccagttcagagcctttgctagactt
gataagaagtctgatgagagtttggagaagtacttcaattgttttgtagctatgtgcagg
cgagtgtgccgaatgccagccaagccagaggaagaacctcctgatctatccactgtgatt
gagccaatcactgaagaacgtgcttctcgaactttatatcgcatagagctcttgcggaaa
gtccgagagcaggttctccatcacccacaattggcagagaggttaacattgtgccagcca
agcttggatctgccagagtggtgggagtgtggcaagcatgacaaagatttactgattggt
gctgctaaacatggagtcagcaggacagattatcacatcctgaatgaccctgaactatcc
tttcttgattctcacaaaaactttgctcaaaacagaggaggaggtaatctgaatgcctta
tctctgttaaatccactgggtgtttgctgtagtcagtcagcctccattatcccatctaca
ccagcaccagatgaaaagactgcagaacaagctgaggttaaactggaaggacctgagaaa
acatcagccaaagagaagtttgatagtaaagaggacgaagaggcaacagatgttgcagta
aaagataaggaggaatgtgaggctgaagctggtcctgttaaatgtgaaataaaggacata
gaactgagtactgaagtagacccaaaatctatttctgaaaagggttcagaagatgacgaa
gaggaaaaacttgatgatgacgacaaatcagaagagtcctcccaacctgaagcaggaaca
atttctcagggtaagaattttgatgaagaaagcaatgcatccctgagcactgcaagggat
gaaacacgggatggattttatatggaagatggcgatccatcagtagcccagctgcttcat
gaaagaacatttgcgttttctttttggcctaaggatcgagtaatgatcaaccgattagac
aacatctgtgaagcagtgttgaaagggaagtggccagtaaatagacgccagatgtttgat
ttccagggacttatacctgggtatacgccaacagctgtggatagccctctgcagaaaagg
agctttgcagagctctccatggttggtcaagctaacatcagtggcaatgaagatatcaca
gtctctcctcagttatccaaggaaaatgcactcaatttatcagttccacgtcagcggagg
aggaggaggaggaagattgaaatagaggctgaaagggcagccaagaggagaaatcttatg
gaaatggttgcccagttgcgagagtcgcaggttgtttcagaaaatggacaagaaaaaatt
gtagacttatcaaaggcctcacgagaggcaccaagttctacctcaacattttcagctgtt
ccttcaaagtttctattacctaatgtttccacaccagtgtctgatgcctttaaaactcag
atggagctgctacaagcaggtctttcacgcacacccacaaggcatctgctaaatggttct
ttaattgatgtagaaccacccatgaaaaggaggagaggaagaaggaaaaatgtagaaggg
cttgatctgttatttatgagcaacaagcgagcatcattgatggcagaggatgcagaagtg
accaaagcatttgatgaagaaattgaaaccccaccatcacgaaacattccatctcctggg
caactggaccctgacactcatatccctgtcattaacattgaggatgggaccaggctggtg
ggagaggatgctcctaaaaacaaggatttagtggaatggcttaaattgcatcctacatac
actgttgatatgccaagttatgtaccaaagagtgcagatgtgctgttttccccatttcag
aagccgaagcagaaacggcacagatgtcgaaaccctaataaactggatataaacacctta
actggagaagagagggtacctgttgtgaataagcgaaatggcaagaagatgggtggagct
atggcccctccaatgaaggacctgccaagatggctggaagaaaatccagaatttgctgtt
gctcccgattggactgacattgttaaacagtctggttttgttccagagtccatgtttgac
cgtcttctcacaggacctgttgtacgggaggagggagcaagcagaagagggagaaggcca
aaaagcgaaattgccaaagcagctgctgccgctgccgctgtagcttcaacttcgggaatt
aacccactgctaatgaacagtctattccctggaatggatcttacgagccttcagaattta
cagaacctgcagtctctccagcttgcaggtctcatgggcttccctccaggactagcgaca
gctgctgctgctggaggtgattctaaaaatccagctgccatgttgtctctgatgatgcca
ggtatgggagggttgcccaacatgtttggactaagcggattgttgaataacccaattaca
gctgcttctggaaacaccactatggcttccagtcaaggagaaactgaagatggcacttca
aaggtagaagagaagaaaactgagaatgaagaggagaacaaagactctgagaaaagcaca
gatactgtttctgctactgactctgcaaatggatctgccagtgcaactgctgctgcggct
gctgccaccaccaccacgaccaacactggattgcctgccaaccctctgaccttcaaccct
ttccttctgtctgccatgtctcctggcctgttctatccgtctatgtttctacctccagga
ctaggaggattgacactacctggtttcccagcattagcaggacttcagaatgcagtgggc
tccagtgaagtgaaggttactgataaaactgaaggagctgcctttaaagatgaagagaat
ctagaaggcagtgatgcagaggaaagccttgataaaactgcagattcctctgctttagaa
gatgaaatagcacagggtgaagaattagactcacttgatggcggggatgaaatagaaaac
aatgaaaatgatgagtaa
DBGET
integrated database retrieval system
