Hemicordylus capensis (graceful crag lizard): 128323322
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Entry
128323322 CDS
T08891
Symbol
CCDC88A
Name
(RefSeq) girdin isoform X1
KO
K25392
girdin
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
hcg03037
]
128323322 (CCDC88A)
Cilium and associated proteins [BR:
hcg03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
128323322 (CCDC88A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HOOK_N
APG6_N
GAS
KASH_CCD
Motif
Other DBs
NCBI-GeneID:
128323322
NCBI-ProteinID:
XP_053102187
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All DBs
Position
1:complement(442873234..443122328)
Genome browser
AA seq
2044 aa
AA seq
DB search
MENEVFTPLLDLFISSPLVTWVKTFGPLAGGNRTNLEEYVALVDGVFLNEVMLQINPKAA
SQRVNKKVNNDASLRIQNLSILVKQVKLYYQETLQQLIMMPLPNVLIIGKNPFSEQGTDE
VKKLLLLLLGCAVQCQKKEEFIERIQSLDFDTRAAVAAHIQEVTHNQENVFDLQWMDDNA
LSQEYIEPLLKNMALHLKRLIDERDEHSETIIELSEERDSLHFLPHASAAQSPCGSPGMK
RTESRQHLSVELADAKAKIRRLRQELEEKTEQLLDCKQELEQIEVELKRLQQENMNLLSD
ARSARVYRDELDALREKAIRVDKLESEVSRYKERLHDIEFYKARVEELKEDNQVLLETKT
MLEDQLEGTRARSDKLHELEKENLQLKAKLHDMEMERDMDRRKIEELMEENMTLEMAQKQ
SMDESLHLGWELEQMNRSTEIAEVPRKSLGHEVNELTSSRLLKLEMENQSLLKTVEQLQN
TVGSVEGSNSKILKMEKETQRLNKKLEVLENELTEEKQSLQNSQNLSKDLMKEKAQLEKT
IETLRENSERQIKILEQENEHLNQTVASLRQRSQISAEARVKDIEKENKILHESIKETSS
KLNKIEFEKKQIKKELEHYKEKGERADEMEKEVHHLEKENEVLQKKITNLKITCEKIDAL
EQENATLEVENRKLKKTLDSLKNLSFQLESLEKENAQLDEENLELRRTVESLKSANIKMA
QLQLENKELESEKEQLQKSLELMKTSCKKTERLEVSYQGLDTENQRLQKALENSNKKIQH
LECELQDLETENQTLQKNLEELKISSKRLEKLEKENKLLEQETSQLEKDKKQLEKENKRL
RQQADIKDSTLEENNVKICNLEKENKSLVKEIGVCKEASVRLKEIEKENKELVKRATIDK
KTLVTLREDLVNEKLKTQQMNNDLEKLTYELEKIGLNKERLLHDEQSTDDSKYKLLESRL
ESTLKKSLEIKEEKIAALEARLEESTNLNQQLRQELKTVKKNYEALKQRQEEEKMVQNCS
SRTGEESQSVNKWERESQETTRELLKVKDRLIEVERNNATLQAEKQALKTQLKHLETQNN
NLQAQILTLQRQSVSLQEQNTTLQTQNAKLQVENSAINSQSTSLMNQNAQLLIQQSALEN
ENESIIKEREDLRSLYDSLVKDHEKLEQLHERQAAEYESLISKHGNLKSAHKNLEVEHKD
LEDRYNQLLKQKVQLEELEKALKAEQEKMLQQSKKHETVAAEYKKLCEENDRLNHTYNQL
LKENEVLQMDHKNLKTLLNNSKLEQTRLEAEFSKLKEQYQQLDITSTKLNNQCELLSQLK
GNLEEENRHLLDQIQTLMLQNRTLLEQNMESKDLFHVEQRQYIDKLNELRRQKEKLEEKI
MDQYKFYEPSPPRRRGNWITLKMRKLIKSKKDVNRERLKSLTLTPTRSESSEGFLQLPHQ
DSQDSSSVGSNSLEDGQTVGTKKSSMVALKRLPFLRNRPKEKDKMKAFYRRSMSMNDLMQ
SMVLAGGQWTGSTEHLEGPDDIPTGKRRKELGSMAFSTTSINFATVNSAAGLRSKQLLNN
KDATSFEDVSPQGISDDSSTGSRIHASRPASLDSGRTSTSNSNNNASLHEVKAGAANNQS
RPQSHSSGEFSLLHDHDAWSSSSSSPVQYLKSHTRSSPILHHKISETLDRPGTRRFKTDS
PGSEVVTLQQFLEESNKVTSAEIKSSSQDNLLDEVMKIFSENAELAGREKLRKQSSGCSG
IARSQSVKTTAEFSDGKLTKQEYLARSSTRRMEDSNFSNSSKTLTAGTKGRAKSVKENVH
TNLSQRQSKDCNPYATLPRASSVISTAEGTTRRTSIHDFLSKDTRQPVSVDPAPSATDRS
VPSSSSEYNPQQQSSVFHYTPYAAITLSENDLGSICTLDHSAYTSEKPRNTRTGKANVVL
KTCSHSNVHNDKVGLSIRGIGKLSAICLSRPFLSINTELVSNVSGLPQRPVSKATDRTFG
SSVKSPQKDHPPASEDQKSDDRNVEMTQNSSECTALSNVNTSDSESRLPVSEDTQTVWYE
YGCV
NT seq
6135 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacgaggtattcacacctcttttggatctcttcatatccagccctcttgttact
tgggttaagacatttggaccgctagctggaggaaatagaacaaatttggaggaatatgtt
gcactggtggatggtgttttcttgaatgaagtcatgctccagatcaaccctaaagcagcc
agtcaaagagtcaataaaaaagtcaacaatgatgcatcacttcgaattcaaaacttgtct
attttggtgaagcaagttaaattgtactatcaggagacgttgcaacagttgattatgatg
cctttgccaaatgttttaataattggcaaaaaccccttttctgaacaaggtaccgatgaa
gtaaaaaagctgcttctactcctgctcggctgtgcagttcagtgtcagaagaaagaagaa
ttcatcgaaagaatccagagtttagactttgatacaagagcagctgttgctgcccatata
caagaggtaactcataatcaggaaaacgtttttgatctccagtggatggatgacaatgct
ctgtcacaagaatatattgagcctctactaaaaaatatggcattgcatttaaaaaggctt
atagatgaacgagatgagcattctgagactatcatagaactatctgaagaacgagactct
cttcattttctacctcatgcatcagcagcacagtcaccttgtggatctccaggcatgaaa
cgtactgaaagcagacagcacttgtcagtggagctagcagatgccaaagcaaagatcaga
aggctcagacaagagcttgaggaaaagactgaacagttgctggattgtaaacaagagctg
gaacagatcgaagttgaattgaagagactgcagcaagagaacatgaatttgctttcggat
gcccgttctgctagggtataccgggatgaacttgatgctctcagagagaaggcaatccgg
gttgacaagcttgaaagtgaagtcagccgatacaaagagaggctacatgatattgaattc
tacaaggctagagttgaggaattaaaagaagataatcaagtattgttggaaacaaagaca
atgttggaagatcagttggaaggcacccgagcccgttctgataaattgcatgaattggag
aaagagaatctacagttaaaagctaaattgcatgatatggagatggaacgtgatatggat
cggaggaaaatcgaggaacttatggaggaaaatatgaccctagaaatggctcagaagcag
agtatggatgaatcactacatcttggctgggagcttgaacagatgaacaggtctactgaa
attgctgaagtgccacggaagtcacttggtcatgaagttaatgaactgacctcaagtcgg
ctattgaaactagaaatggaaaaccaaagtttgttaaagactgtggaacagctgcaaaat
acagtgggatctgtggaaggcagtaattcaaaaattctgaaaatggaaaaggaaacccaa
agactgaataaaaagttggaagtacttgagaatgagcttactgaagagaaacaaagtctt
cagaatagtcagaatctgagcaaagatttgatgaaagagaaagcacagcttgaaaaaaca
attgagacactgagagaaaactctgaaagacagattaaaatactggaacaggagaatgag
catttgaatcaaacagtggcttccctcagacagcgctcacagatcagtgctgaagcaaga
gtcaaagatattgaaaaagaaaataaaattctccatgaatctatcaaagagacaagtagc
aaattaaataagatagaatttgaaaagaagcaaattaaaaaagagttggaacattataaa
gagaagggagaaagagcagatgagatggagaaggaagttcatcatcttgaaaaagaaaat
gaagtgttacagaaaaagattaccaatctaaagattacatgtgaaaaaatagatgcttta
gaacaagaaaatgccactctcgaagttgaaaatagaaagctgaagaaaactttagatagc
ctgaaaaatctcagctttcagttagagtcattagagaaagaaaatgcacaacttgatgaa
gaaaatttagaactcagaagaacagttgaatctttgaagagtgcaaacatcaaaatggct
cagttacagctagaaaataaagaacttgaaagtgagaaagaacagcttcagaagagcctg
gagcttatgaaaacgtcttgtaagaagactgaacgtttagaagtcagttaccaaggtttg
gatacagagaaccaaaggctgcaaaaagccctagaaaacagcaataaaaagatacagcat
ttggaatgtgaattgcaggatctagagacagaaaatcaaaccctacaaaaaaacctggaa
gagctcaaaatctctagtaagcgcctagaaaaattagagaaggagaataagcttttggag
caagagacctctcagctggagaaagacaaaaagcagttagaaaaagagaataagcggctt
cgacaacaagcagacattaaggacagcacgttagaagaaaataatgtgaaaatttgtaac
ctagaaaaagagaacaagtcactggtgaaagaaattggtgtatgtaaagaagcttctgtt
cgactaaaagagattgaaaaagagaataaagagcttgtaaaaagagccaccattgacaag
aaaacacttgtcacattgcgagaggatttggtgaatgaaaagctgaagacacagcagatg
aataatgatttagaaaagcttacatacgaacttgaaaaaataggtttaaataaggagcgt
cttctccatgatgagcagagtactgatgacagcaaatacaaactgttggaatcaaggttg
gagtccacactgaagaagtcacttgaaataaaagaagaaaaaattgctgctttggaagct
cgattagaagaatcaacaaatctaaaccaacagctgcgtcaggagcttaaaacggttaaa
aagaattatgaagccctaaagcaaagacaagaagaggaaaaaatggtacaaaattgttct
tcaaggacgggtgaagaaagtcaatcagtcaataaatgggaaagagagagtcaggaaact
actagagaacttttgaaggtcaaagatagattgattgaagttgaaagaaataatgcaact
ctgcaggcagagaagcaagccctgaaaacacaactaaagcatcttgagacacagaacaat
aatttgcaagcccagattttgacacttcagagacagtctgtctccttacaggagcaaaat
acaaccctgcaaactcagaatgccaagcttcaggtagaaaactcagctatcaattcgcaa
agtacatctcttatgaatcagaatgctcagctgctgattcagcagtctgccttggaaaat
gagaatgaatccataatcaaagaacgggaggatttgagatcactgtatgattccctagtc
aaagaccatgaaaaactggaacagcttcatgaacggcaagctgctgaatacgaatctcta
atttccaaacatggaaaccttaaatcggcacacaagaatcttgaggtggaacataaggac
ttagaagacaggtacaatcagttgctgaaacaaaaggtgcaattggaagaactggaaaaa
gctctcaaagcagagcaagaaaagatgctacagcaaagcaaaaagcatgaaactgtcgca
gcagaatacaaaaagctctgtgaggaaaatgatagactaaatcatacctacaaccaactt
ttgaaagagaatgaagttctccaaatggatcataagaatttgaaaacactactgaacaat
tctaaactagaacaaacacgattagaagctgaattttccaagctcaaagaacagtaccaa
cagctggacattacatctacaaaactgaataatcagtgtgagttgcttagccaattaaaa
ggaaacttggaggaagaaaacagacatctattggatcaaatacagacgttaatgctacag
aacagaacgttattagagcagaatatggaaagcaaagatctcttccacgttgaacagaga
cagtatattgacaaattaaatgaattgagaagacaaaaagagaaactagaagaaaagatt
atggatcagtataaattttatgaaccatctcccccaagaaggagagggaactggattact
ctgaaaatgaggaagttgataaaatctaagaaggatgttaacagagaacgtctcaagtct
ttgactctgacaccaacccgctcagaatccagtgaaggatttcttcaactacctcatcag
gatagtcaagatagttcctcagtgggctcaaactcacttgaagatggtcagactgtggga
accaaaaaaagcagcatggttgcactgaaaagactgccctttttgaggaacagaccgaag
gaaaaagacaaaatgaaggccttctaccgtcgctccatgtccatgaatgacctgatgcag
tccatggtcctagcaggaggacaatggacaggtagtactgagcatctggagggtcctgat
gatatacctacgggtaaaaggagaaaagaattgggatctatggccttctctactacatca
atcaactttgcaactgtcaactctgctgcaggcttgagatccaagcagttgcttaataat
aaagatgctacatcttttgaagatgtaagcccacaaggaattagtgatgattctagtaca
ggatcaagaattcatgcttccagacccgccagccttgatagtggcagaacatccactagc
aatagcaataataatgcctcacttcatgaagtcaaagcaggtgcagctaataatcaaagc
aggccacaaagccacagtagtggagaatttagcctgcttcatgatcacgatgcatggtcc
agcagcagcagcagtcctgtccagtatctgaaaagccataccagatctagccccatactt
catcataaaatatcagaaactctggatagaccaggaacacggagatttaagactgattct
cctggaagtgaagtagttactctgcagcaatttttggaagaaagtaataaggttacttca
gctgagatcaagtcctcaagtcaagacaatcttttggatgaagtaatgaaaattttttct
gaaaatgctgaattagcaggaagggagaaactaaggaaacagtcatcaggctgcagtggt
attgccagatcacagagtgtgaaaaccactgctgagttttctgatggcaagttaactaaa
caagaataccttgcaaggtccagtacacgtagaatggaagattctaacttctcaaattct
tcaaaaacacttacagcaggcactaaaggaagggccaagtctgtaaaggaaaacgtacat
acaaatctgtcacaacgacaatcaaaagattgtaacccttatgctactttacctcgggca
agcagtgtgatttcaacagccgaaggaactactcgaaggacaagcatccatgatttttta
tctaaggacactaggcaaccagtatcagttgacccagcaccatctgcaactgacagaagt
gtcccatcgtcttctagtgagtacaatcctcaacagcagtcctctgtttttcattataca
ccttatgctgcaattaccttgtcagaaaatgacttgggtagtatatgtaccctagatcat
tctgcatatacatcagaaaagcctaggaatacaaggacaggcaaggcaaacgttgttctt
aaaacttgttcacatagtaacgtgcacaatgataaggtgggcttatcaataagaggtatt
gggaaactttctgcaatctgtctgtctaggccatttttgtcaattaacactgaattggtc
agcaatgtaagtggattgccccagaggcctgtttcaaaagccactgataggacatttggc
tcatcagtaaaatcgccacagaaagaccacccgccagcttctgaggatcagaaatctgat
gacagaaacgtagagatgactcagaatagtagtgaatgtactgccctttcaaatgtaaac
actagtgacagtgaatcccgattaccagtttctgaggatactcaaactgtatggtatgaa
tatggttgtgtatga
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