KEGG   Hemicordylus capensis (graceful crag lizard): 128323413
Entry
128323413         CDS       T08891                                 
Symbol
KDM5B
Name
(RefSeq) lysine-specific demethylase 5B isoform X1
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
hcg  Hemicordylus capensis (graceful crag lizard)
Brite
KEGG Orthology (KO) [BR:hcg00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:hcg01009]
    128323413 (KDM5B)
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:hcg03036]
    128323413 (KDM5B)
Enzymes [BR:hcg01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     128323413 (KDM5B)
Protein phosphatases and associated proteins [BR:hcg01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     128323413 (KDM5B)
Chromosome and associated proteins [BR:hcg03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    128323413 (KDM5B)
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel PHD ARID zf-C5HC2 JmjN PHD_Pygo PHD_UBR7-like zf-PHD-like PHD_2 PHDvar_NSD
Other DBs
NCBI-GeneID: 128323413
NCBI-ProteinID: XP_053102467
LinkDB
Position
4:complement(50623684..50740373)
AA seq 1540 aa
MAEFLPPPECPVFEPSWEEFADPFSFIHKIRPIAEQTGICKVRPPPDWQPPFACDVDKLH
FTPRIQRLNELEAQTRVKLNFLDQIAKFWELQGCTLKIPHVERKILDLFQLNRLVAEEGG
FDLVCKDRKWTKIATKMGFAPGKAVGSHIRAHYERILYPYNLFQSGASLLAPDICSKLMC
LVDDAVLEKCLQKPDLASDTKDKEYKPHDIPQRQSVQPSETCPPARRAKRMRAEATNIKA
DSEEPTETKSHNLRRRMGSTPAKPDNDKESHGIVKREAVEKKQPVWESDREKPKGRSKKS
FNAVDLYVCLLCGSGNDEDRLLLCDGCDDSYHTFCLIPPLHDVPKGDWRCPQCLAQECSK
PQEAFGFEQAARDYTLRTFGEMADAFKSDYFNMPVHMVPTELVEKEFWRLVSTIEEDVTV
EYGADIASKEFGSGFPVRGGKIKLRPEEEEYLDSGWNLNNMPVMEQSVLAHITADICGMK
LPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGAPGYAAEQLEDVMKKLAPELFE
SQPDLLHQLVTIMNPNTLMSHGVPIYRTNQCAGEFVITFPRAYHSGFNQGFNFAEAVNFC
TVDWLPLGRQCVEHYRLLNRYCVFSHDEMICRMAAKAETLDVVVASTVEKDMAIMIEDEK
ALREAVCKLGVTDLERMNLEMLPDDERQCIKCKTTCYMSAVYCSCNPGLLVCLYHIEDLC
TCPSYKYKMGYRYTVDELYPMMNALKLRAESYNEWASNVNEALEAKVNNKKSLISFKALI
EESEMKKFPDNDLLRHLRLVTQDAEKCASVAQQLLNGKRQTRYRSGGGKSQNQLTVNELR
LFVRQLYALPCVLSQTTLLKDFLNRVEEFQKYSQKLLSEEIPSASELQELLDVSFDFDVD
LPQLGELRIRLEQARWLEDVQQVCLDQNSLTLDDMRRLIDSGVGLAPHPAVEKAMARLQE
LLTVSEHWDDKARTLIKARPRQSLNSLEAAVKEIEEIPAYLPNGAALKDAVKKAKDWLQE
VEGLQAGGRVPVLDTLVELVSRSRSIPVHLEYLPRLEALVTEVQAWKECAANTFLTENSS
YSLLEVLCPRCDIGTLGFKRKTKKLKEPVPNGRKRSTKLESLNDLERALSESKETAAAMA
TLGEARLKEMEALHSLRAANEEKIFSNEQDVEIKVCLCQREPTAPMIQCELCRGVFHTSC
VAVPNTLPEPRVWLCPHCHRSEKPPLEKILPLLAALQRIRVRLPEGDALRYMIERTVTWQ
HRAQQMLSSGNIILSQDKVGSGILYSRWQTMAGQLQETSKVSQTIGATSFSLPHDWNNRP
MHLHSPFSTGQNCIPLHAISAELNELMMEAQLLQVSLPEIQELYEILFTKQSPVSKSEQR
SPVGPTSEKHDCCRGKRDGICSVERKLKRRFERGNFCNEMRTRVRKITPNKKKLKLTHLR
ELSTSKLERERLFDIQRSSESQLLLSDMSFSEQEESEDEDAICPAVNCLQPEGDEVDWVQ
CDGCCNQWFHQVCVGVSPEMAEKEDYICVSCTGKDSPYRK
NT seq 4623 nt   +upstreamnt  +downstreamnt
atggccgagtttctaccgccgcccgagtgcccagtctttgagcccagctgggaggaattc
gcggaccccttctcctttatccacaagatccggcccatcgccgagcagacggggatctgc
aaggtgcggccgccaccggactggcaacctccatttgcatgtgatgttgataaacttcac
tttactccacgaatccaaaggctgaatgaattggaggctcagacccgggtaaaactgaat
tttctggaccagatagcaaagttctgggaacttcaaggatgcacactgaaaattccacat
gtagaaaggaaaattttggatttgttccagcttaacaggctagttgcagaagaaggtgga
tttgaccttgtttgtaaggacagaaaatggaccaaaatagccaccaagatggggtttgct
cctggcaaagcagtgggttcgcatattcgtgctcattatgagcgcattctttatccttac
aacttattccagtctggagctagcctcctggcacctgacatttgttccaaactgatgtgt
ttagtggatgatgcagttctggaaaagtgccttcagaagccagaccttgcgagtgataca
aaggacaaggagtacaaaccccatgatatcccacaaagacagtccgttcagccatctgaa
acatgtccacctgcacgtcgagcgaaacgtatgagagcagaggctactaatattaaagct
gattcagaggagcctactgaaaccaaatctcacaacttgagacgcagaatgggaagcacc
cctgcaaagcctgacaatgataaagaatctcatggcatagtgaaacgggaagctgttgaa
aagaaacaacccgtttgggaaagtgacagagaaaaaccaaaaggacgttctaagaaaagc
tttaatgcagtggatttgtatgtatgtctcttgtgcggcagtggtaatgatgaggaccgt
ttgctcctatgtgatggctgtgatgacagttaccataccttttgcttaattccacctctt
catgatgttcccaaaggggattggagatgcccccaatgcctagctcaggagtgcagtaaa
ccacaagaagcatttggatttgaacaggcagcgcgagattacacacttcgcacatttgga
gaaatggcagatgccttcaagtcagattattttaacatgcctgtacacatggttcctaca
gaattagttgagaaagagttctggcgtcttgttagcacaattgaagaggatgtcacagtg
gaatatggtgctgatattgcttcaaaggagtttggcagtggatttcctgtgagaggtggg
aaaattaaactaagaccagaagaagaggagtatcttgatagtggatggaatttgaacaat
atgcctgtgatggagcaatctgtccttgctcacatcactgcagatatatgtggaatgaag
ttgccttggctatatgtagggatgtgcttttcgtcattttgttggcatattgaggatcac
tggagctattccattaattatctgcactggggagagcctaaaacatggtatggagctcca
ggatatgcagctgagcaattagaagatgtgatgaagaaactggctcctgagctatttgaa
tctcagccagaccttttacatcagctagttacaattatgaatcccaatacgctaatgtct
catggtgtgcctatttaccgaaccaaccagtgtgctggtgaatttgtgattacatttcca
agagcctatcacagtggatttaatcaaggtttcaactttgctgaagctgttaatttctgc
actgttgactggttgccattgggccgccagtgtgtggaacactatcgcttgttaaaccgc
tattgtgtgttttcacatgatgagatgatatgtagaatggctgccaaagcagagactctt
gatgtggtggtagcttctactgttgagaaagacatggccattatgattgaagatgaaaag
gctttacgggaggctgtgtgtaagctgggagttactgatttagagagaatgaatttggaa
atgttgcctgatgatgaacgacagtgcataaagtgtaaaaccacttgctacatgtctgct
gtctactgttcatgtaaccctggcttgttggtatgcctatatcatatagaggacctctgt
acatgtccctcttataaatataaaatgggataccgatatacagtagatgaactgtatcca
atgatgaatgcacttaagttgcgggcagagtcctacaatgaatgggcttctaatgtcaat
gaagctttggaggcaaaagttaataataaaaaaagtctcataagtttcaaagctttaatt
gaagaatctgaaatgaagaagtttccagacaatgacctactgcgacatctccgtttagtt
actcaggatgcagaaaaatgtgcctcagttgcgcagcagcttcttaatggcaagaggcaa
accagatatcggtctggaggaggaaaatcccagaatcagttgactgtgaatgaactccgt
ttgtttgttagacaactttatgctttgccatgtgtcctcagccaaacaacattgctgaag
gattttcttaatcgtgtggaagaattccagaagtatagccaaaaactcctctctgaagaa
attcccagtgcttcagaactacaggaactcttggatgttagttttgactttgatgttgat
cttcctcagctaggtgaattacggatacgcctagagcaagcacgctggctggaagatgta
cagcaggtttgcttggaccagaattctcttactctggatgatatgagaagactcatagac
tctggtgttggactagctcctcatcctgcagttgagaaggcaatggctaggttgcaagaa
ctcttaacagtatctgaacactgggatgacaaggccagaaccttgataaaggccagacca
cggcagtcattaaacagtcttgaagcagcagtgaaggagatagaggaaattcctgcttat
cttccaaatggtgctgctctgaaagatgctgtaaagaaggcaaaagactggttacaggaa
gtggagggcctgcaggctggtggacgcgtgcctgtgttagatacacttgtggaacttgtg
tcacgaagtcgctctattccagtacatctggaatatctgccaaggctagaggcattagtg
actgaggttcaagcttggaaagagtgtgcagccaataccttcttgactgagaattcttct
tattctcttctagaggtgttgtgtccaagatgtgatattggaacactgggttttaaaaga
aaaacaaagaaattaaaagagcctgtcccaaatggaagaaagagaagcaccaaattggaa
agtttaaatgatttagaaagagctttatcagagagtaaagaaactgctgctgcgatggcc
acacttggtgaagcccgtttaaaagagatggaagcattgcattctctaagagctgcaaat
gaagaaaaaattttctctaatgagcaagatgtagagataaaagtttgcctatgccagaga
gaaccaactgcaccaatgattcagtgtgaactttgcagaggggtctttcataccagttgt
gttgcagtacccaacacattgccggaacctcgagtgtggctctgtcctcactgccataga
tcagaaaagccacctttagaaaagattctacctttactggctgccttgcagcgtattcgt
gtgagactgcctgagggagatgctttacggtatatgattgagagaaccgtgacctggcaa
cacagagcacagcaaatgctatcctcagggaatataatactttcacaagacaaagtgggc
tcagggatactgtacagcagatggcaaaccatggcaggccagttgcaagagactagtaag
gtatcacagacaattggtgctacgtctttctctttgcctcatgactggaataacagaccc
atgcatttacattctcctttttctacaggacaaaactgcatcccccttcatgctattagt
gcagagctgaatgaactgatgatggaagcccaattgctgcaggtttcattacctgaaata
caagagctctatgaaatcttattcacaaagcagagccctgtttccaagtcagaacagagg
tcgcccgtaggaccaacaagtgaaaagcacgattgttgccgaggaaagagagatggaatt
tgttctgtggaaaggaagctaaagaggcgctttgagagagggaatttctgcaatgagatg
agaacgagagtccgaaaaataactcccaacaagaaaaaactgaaactcactcatttgaga
gagctgagtaccagcaagctggaaagagagaggctgtttgacattcagcgctctagtgaa
agccagttgcttctgtcagatatgtccttctctgaacaggaggaatctgaagatgaggat
gccatctgtccagctgtcaactgcctgcagcctgaaggtgatgaggtggactgggtccag
tgtgatggctgctgcaaccagtggttccatcaagtgtgtgtgggtgtttctccagagatg
gcagaaaaagaagactacatctgtgtgagctgtactggaaaggattctccatatcgaaag
taa

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