Hemicordylus capensis (graceful crag lizard): 128323421
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Entry
128323421 CDS
T08891
Symbol
RB1CC1
Name
(RefSeq) RB1-inducible coiled-coil protein 1 isoform X1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Pathway
hcg04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
128323421 (RB1CC1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
hcg01009
]
128323421 (RB1CC1)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hcg04131
]
128323421 (RB1CC1)
03029 Mitochondrial biogenesis [BR:
hcg03029
]
128323421 (RB1CC1)
Protein phosphatases and associated proteins [BR:
hcg01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
128323421 (RB1CC1)
Membrane trafficking [BR:
hcg04131
]
Autophagy
Autophagosome formation proteins
ULK complex
128323421 (RB1CC1)
Mitochondrial biogenesis [BR:
hcg03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
128323421 (RB1CC1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG11
ATG17_like
TBK1_ULD
SpoIIID
Motif
Other DBs
NCBI-GeneID:
128323421
NCBI-ProteinID:
XP_053102491
LinkDB
All DBs
Position
4:complement(257783718..257909755)
Genome browser
AA seq
1599 aa
AA seq
DB search
MKLYVFLVNTGTTLTFDTELAVQNVADLKQAIQTKYKIAIQHQVLVVNGGECMAADRKVC
SYSAGTDTNPIFLFNKEMILCERPPAIPKTTFSAENEMELKVEESLMMPAVFHTVASRTQ
LAVEMYEIAKKLCSFCEGLVHDEHLQHQGWAAIMANLEDCTHSYQKLLFKFENVYSSYLQ
SIDDIKLKLTHLGAAVSIMAKIPLLECLTRHSYRECLERLDSSAEHGGTESDDTENEKSA
EVVLSPDMLKMNNPSLLASFCKSVEHPTSDGTTSEKVNENREASQNPSVQDNEVSVELQE
DDLPSFNVSLLDWINVQDRPNDVESLVRKCFDSMSRLDPKIIQPFLADCRQAIAKLDNQN
MKAIKGLEDRLYALDQMIASCSRLVNEQKELAQGFLANQKRAENLKDPSVLPDLCLSHAN
QLMIMLTNHRKLLDIKQKCTTAKQELANNLQVRLKWCCFVMLHADQDGEKLQALLRLVTE
LLERVKIVEKLSNVPQMYCLAVVEVVRRKMFVKHYREWAGALIKDGKHLYDAEKAKRESF
GKLFRKSFLRNRLFRGLDAWPPSFCTRKPRRFDGELPDISVSDLQFLQSFCPSEVQPLLR
VPILCDFEPLHQHVLALHNLVKAAQSLDDEMSQTITDLLNEQKASNSQVSPQSVTTPRME
STAGTTIATSPRTPPPPLSFQGPLYPPVSPPGPLEELSPDSIDAHTFDFETIAHPNIEQA
LKQGSLDLDSLAESPESDFMSAVNEFIIEENPASPNVISDPQSPEMMVESLYSSVINAID
SRRMQDTNICAKEEALENSAINIYMEKCRVLAQESQLNLRNIKEDLCHFRTYIEKEQCDF
SSSLKCTSIEIRNIIDKVKLSLEKTLKDKHQKELQSVKTEYESRMNTLVEDGEENQKKIT
KLKSDLKGLEDVLHDKNNEFTVVKNEKEAVMCLQNEKDQKLLELECQMKNQSCEIKELRE
SREKVLENLKKLHIENDEKLQLLRVELQNLEQDHLTELESNLHVRHIQEFEELMAKHNDC
LEKLKIENQHRLEQMQESHAADVQEKVRQIEELKIKVSELSDLRCKLEVELALKEAESDE
IKLLFEESKTQQQDNLKSLIDKETEILRKEIDKLNHKIQVNNDEYQVGLAALRTLMTIEK
DQCISELINRHEEETNLLRTELSNVTSLHQKALEAEKKLEEQITELQGKLELEVSVLEKQ
KEENLTLCKQQKKYEVTISTLEEERDLLIMIREQDRKLLVQELSCEKEEAVRNALKEFEL
QREAVEKELFEKIQQLEMQVNQSSSESSASSLVVELQEKLQEEKVKFLEQLEEHEKRKNE
EMQNIRTSLTAEQQTTFNTVLTREKMKKENIINDLSDRLKTITRQQERDKDLIETLSEDR
ARLLEEKKKLEEEVNKLRGSNFTPSTCLPPASEPSGACAADFATETERFASDTTEEGKMD
SAMETSMMTVNENVQILSEEKQRIMMLEKTLQLKEEENKRLNQRLMSQSMSSVSLRHSEK
IAIRDFQVGDLVLIILDERHDNYVLFTVSPTLYFLHSESLAALDLKPGECASGTSRRPWV
LGKVMEKEYCQAKKAQNRFKVPLGAKFYRVKAVPWNKKV
NT seq
4800 nt
NT seq
+upstream
nt +downstream
nt
atgaagttatatgtatttctggtgaacactggaaccacacttacgtttgacacggaactt
gcagtacagaatgtggcagaccttaagcaggcaatccaaaccaagtacaagatcgctatt
cagcatcaagtactggttgtcaatggaggggagtgtatggcagctgacaggaaagtctgt
agttacagtgctggaacggacacaaacccaatttttctcttcaacaaagaaatgatcttg
tgtgaacgtcccccagcaatccccaaaacaacattttcagcagaaaatgagatggaatta
aaagttgaagaatcccttatgatgcctgcagtttttcacacagtagcttcacggacacaa
cttgctgtggaaatgtatgagattgccaagaaactttgttccttctgtgaaggtctggtc
catgatgaacatcttcagcaccaaggctgggctgccataatggcaaacttggaagattgc
acacattcttaccaaaagctgcttttcaagtttgaaaatgtatattcaagttacctgcag
tccatagatgatattaagctaaaacttacacacttaggggctgctgtttctataatggcc
aagatcccattgctggagtgcctaaccagacatagttacagggaatgtttagaacgactg
gattcttctgctgaacatggaggaacagaaagtgatgacactgagaatgagaagtcagct
gaagtggtgctttctcctgacatgcttaaaatgaacaacccatcactgttagcatcgttt
tgcaaatcggtagaacacccaacctcagatggcacaacgtctgaaaaagtgaatgaaaat
agggaagccagtcaaaatccttcagtccaggataatgaagtttcagtagaacttcaagaa
gatgatttgccatctttcaatgtttcccttttagattggataaacgttcaagatagacct
aatgatgttgaatcattggtcagaaaatgttttgattctatgagcagacttgacccaaag
atcattcagccctttttggcagactgtcgacaagcaattgccaaactagataatcagaac
atgaaggccattaagggacttgaggacaggctttatgcactggaccagatgatagctagc
tgtagcaggctggtaaatgaacaaaaagaacttgctcagggatttttggctaatcagaag
agagcagagaacttgaaagatccttcggtgttacctgacttgtgcttgagtcatgcaaat
caattgatgattatgttaactaaccacagaaaacttttagatattaaacagaaatgtact
actgccaaacaagaacttgcaaataacctacaagtccgactgaagtggtgctgctttgtg
atgcttcatgctgaccaggatggagagaaactgcaagccttgcttcgtcttgtaacagag
ctgctagaaagagtgaagattgtagagaaacttagtaatgtccctcagatgtactgtttg
gctgttgttgaggttgtaaggagaaaaatgtttgtaaaacactacagggagtgggctggt
gctttaataaaagatgggaaacatctttatgatgcagaaaaggccaaaagggaatctttt
gggaaattatttaggaaatcttttctaagaaatcgtttgttcaggggacttgatgcctgg
cctccatccttttgtacccgaaaacctcgcaggtttgatggagaacttcctgatatctca
gtatctgacctgcaatttttacagtccttttgtccttcagaagtccagccattactcagg
gttcctatactttgtgattttgaacctctccaccagcatgtacttgctctacataatctg
gtcaaagcagcacaaagtttggatgatgaaatgtcacagactattacagatctgctgaat
gaacaaaaggcttccaacagtcaagtctcgccacaatctgtcactacaccaaggatggaa
agtacagcaggaacaacaattgctacctctcctagaactccacccccaccactcagtttt
cagggtcccttgtaccctcctgtgagtccccctggtccattagaggaattatctccagac
agtattgatgctcatacatttgattttgaaacaattgcccatccaaacatagagcaagcc
ctcaagcaggggtctttagatctggactcattggcagaaagtccagaatctgattttatg
tcagcagtgaatgagttcataatagaagaaaatccagcctctccaaatgtgataagtgat
ccacaaagtccagaaatgatggtggagtctctctattcctcagttatcaatgcaatagac
agtaggcggatgcaagacacaaatatatgtgcaaaagaggaagccctagaaaattctgct
atcaatatttatatggagaaatgtagagttcttgcccaggaatctcagttgaatttaaga
aatatcaaagaggatctttgtcactttagaacatacatagaaaaagaacaatgtgacttt
tccagttcattaaaatgtacttccatagaaattagaaatattatcgataaagtaaaactt
tctcttgaaaaaacactaaaagataagcatcaaaaagaactgcagtctgtaaaaactgaa
tatgaaagtagaatgaataccttagttgaagatggtgaagagaaccaaaaaaagattaca
aaactaaaatctgacttaaaaggtcttgaggatgttttgcacgataaaaataatgaattt
acagtagtaaagaatgaaaaagaggctgttatgtgtttacagaatgaaaaagaccagaag
ctgcttgaattggaatgccaaatgaaaaatcagagttgtgaaattaaagaattaagggag
tcgcgtgaaaaagtattagaaaatttgaaaaagcttcatattgaaaatgatgaaaaattg
caacttttgagggtagaacttcagaatttggagcaagatcacctaacagaactagaatcc
aatctacatgtcagacatatacaagaatttgaagaactaatggccaagcacaatgattgt
ttagaaaaattaaaaatagaaaatcaacacagacttgaacaaatgcaggaatctcatgct
gcagatgtccaagaaaaagtacgacaaattgaggaattaaagataaaggtttctgaactg
tctgacttgagatgcaagttggaggtcgaacttgcactgaaagaagcagaatcagatgag
attaaactgctcttcgaagaaagcaaaactcagcaacaggataatctaaaatcccttatt
gacaaggaaactgaaattttaagaaaagagattgataaattgaaccataaaatacaggtt
aataatgatgagtatcaggtgggtttagcagcactgagaactttaatgaccattgagaaa
gatcagtgcatttcggaactaattaacaggcatgaagaagaaaccaatttgcttagaact
gagttgagcaatgtaacttctttgcatcaaaaagctcttgaagcagaaaaaaaattggaa
gaacaaattacagaattgcaaggaaagctagaattggaagtgagtgtcctagagaagcaa
aaagaagagaatttgactctgtgcaaacagcagaaaaaatatgaagtcactatcagtaca
cttgaagaagagagagatctgctcataatgatccgtgagcaggataggaaacttcttgtt
caggagctcagttgcgaaaaagaagaagcagtgcgaaatgcccttaaagagtttgagttg
cagagagaagctgttgaaaaagaactttttgaaaaaatccagcagcttgagatgcaagtt
aatcagagttcatctgaatcatctgcgtcaagcttggttgtggagcttcaagaaaaactc
caggaggaaaaagtaaagttcttggagcagcttgaagaacatgagaaaagaaaaaatgag
gaaatgcaaaacattcgaacatcactcactgcagaacagcagactacctttaacactgtt
ctaacaagagaaaaaatgaaaaaagaaaacataataaatgatcttagtgacagattaaaa
acaataacacggcagcaagaaagggataaggatcttattgaaacactttctgaagaccga
gctcgtttacttgaagagaagaagaaacttgaagaagaagttaataagctgcgcggtagt
aactttactccatcaacctgtttacctcctgcttcagaaccttctggagcttgtgcagct
gattttgcaacagaaactgagcggtttgcttcagatacaacagaggaaggaaaaatggat
tccgcaatggaaaccagtatgatgactgtaaatgaaaatgtgcagatattgtctgaagaa
aaacagagaataatgatgctagaaaaaacattgcaattgaaagaggaagaaaataagagg
cttaatcaaagattgatgtcgcaaagcatgtcttcagtgtctctaaggcattctgaaaaa
atagctatcagagactttcaggttggcgatctggttctcattattttggatgaacgtcat
gacaactatgtcttatttactgttagcccaactttgtatttcttacactcggaatctctt
gctgcattggatctcaaaccaggtgagtgtgcttcaggcacatctcgaagaccctgggta
ttagggaaagtaatggaaaaggaatattgtcaggcaaaaaaggcacaaaacagattcaaa
gttcctttgggtgcaaaattctacagagtaaaagcagtgccatggaacaagaaagtataa
DBGET
integrated database retrieval system
