Hemicordylus capensis (graceful crag lizard): 128323424
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Entry
128323424 CDS
T08891
Symbol
CACNA1S
Name
(RefSeq) voltage-dependent L-type calcium channel subunit alpha-1S isoform X1
KO
K04857
voltage-dependent calcium channel L type alpha-1S
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Pathway
hcg04010
MAPK signaling pathway
hcg04020
Calcium signaling pathway
hcg04260
Cardiac muscle contraction
hcg04261
Adrenergic signaling in cardiomyocytes
hcg04270
Vascular smooth muscle contraction
hcg04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
128323424 (CACNA1S)
04020 Calcium signaling pathway
128323424 (CACNA1S)
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
128323424 (CACNA1S)
09153 Circulatory system
04260 Cardiac muscle contraction
128323424 (CACNA1S)
04261 Adrenergic signaling in cardiomyocytes
128323424 (CACNA1S)
04270 Vascular smooth muscle contraction
128323424 (CACNA1S)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hcg04040
]
128323424 (CACNA1S)
Ion channels [BR:
hcg04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
128323424 (CACNA1S)
SSDB
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Paralog
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
CAC1F_C
Malate_DH
Motif
Other DBs
NCBI-GeneID:
128323424
NCBI-ProteinID:
XP_053102498
LinkDB
All DBs
Position
4:78434464..78520673
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AA seq
1840 aa
AA seq
DB search
MEPTSAQDDNQKKKQQKEKAKKAALELPPRPPRSLLCLTLNNPVRKACIALVEWKPFEII
ILLTIFANCVALAIYLPMPEDDTNKVNTRLEKLEYFFLIVFAIEAMLKIIAYGFLFHADA
YLRNGWNVLDFTIVFLGVLTVILERISLIEGALLSGQGGFDVKALRAFRVLRPLRLVSGV
PSLQVVLNSIIQAVLPLFHIAVLVVFMLIIYAIVGQELFKGKMHKTCYYVGTDIIATVEN
EKPSPCTSTGHGRHCTINGSECRGWWPGPNNGITHFDNFGFAMLTVYQCISMEGWTAVLY
WVNDAIGNEWPWIYFISLILLGSFFILNLILGVLSGEFTKEREKAKSRGTFQKLREKQQL
EEDMKGYMDWITHAEVMEYDRAHGEGMMPLDEGGSETESLYEIEGMNKWILFFRHWRRWN
RLFRRKCREVVKSKFFYWFVILIIALNTLAIASEHHYQPAWLTSAQDIANRVLLALFAIE
MILKMYALGLRQYFMSLFNRFDCLVVCTGILEIVLVEITSMSPLGISVLRCIRLLRIFKI
TKYWTSLNNLVASLLNSVRSIISLLTLLFLFMVIFALLGMQLFGGKFDFDDTEIRRSTFD
NFPQALISVFQVLTGEDWTSIMYNAIMAYGGPCYPGMLVCIYFIILFVCGNYILLNVFLA
IAVDNLAEAETLTSAQKASAEEKKRRKMGRGYPEKSDEEKLLLAKKLEQKAKGEGIPTTA
KLKVDEFESNVNEIKDPYPSADFPGDDEEDEPEIPLSPRPRPLAELQLKEKAVPMPEASS
FFIFSPTNKIRVLCHRIVNATWFTNFILLFILLSSISLAAEDPIRADSFRNQILGYFDIG
FTSVFTVEIVLKMTAYGAFLHKGSFCRNSFNILDLLVVAVSLISMGIESSAISVVKILRV
LRVLRPLRAINRAKGLKHVVQCVFVAISTIGNIVLVMALLQFMFACIGVQLFKGMFYSCT
DPTKMTEQECRGHFITFIDADPNQIELHKRIWLHNEFHFDNVFSAMMSLFTVSTFEGWPQ
LLYKAIDSHTEEMGPIYNHRMGIAIFFIIYLILIAFFMMNIFVGFVIVTFQEQGETEYKD
CELDKNQRQCVQYALKARPLRCYIPKNPYQYQIWYLVTSSYFEYLMFFLITLNTICLGMQ
HYNQSETMNQVSDVLNVVFTLLFTVEMILKLIAFKAKGYFGDPWNVFDFLIVIGSIIDVI
LSQIDTVLASSGGLYCLSGGCNGVPPTPANEESGRVSITFFRLFRVLRLVKLLSRGEGIR
NLLWTFIKSFQALPHVALLIVMLFFIYAVIGMQMFGKIALVDGTQINRNNHFQTFPQAVL
LLFRCATGEAWQEILLAASYGKRCDPESEYAPGEENTCGTGFAYFYFISFYMLCAFLIIN
LFVAVIMDNFDYLTRDWSILGPHHLDEFKKIWAEYDPEAKGRIKHLDVVTLLRRIQPPLG
FGKFCPHRVACKRLVGMNMPLNSDGTVTFNATLFALVRTALKIKTEGNFEQANEELRMII
KKIWKRTSMKLLDQVIPPIGDDEVTVGKFYATFLIQEHFRKFIKRQEEYYGYRPKKNAVE
IQAGLRTIEEEAAPEIHRAISGDLTAEEELERAMVEAAMEEGIYRRTGGLFGHVDTFMEP
SSPLPPHMANQRPLQFTEVGSEDLDSPVFLDDFPPEGHSNVNNSNNVNNSNSNVDNNATA
WMTYENEIKKTRLPPSHKLPVLDKECFIGTEKQQRNMSKVPAHGDKSCLELQLPKKKPIV
SQRKPNDGEVLPSRSSSEGTPSGNSEEVSTPATIQLVQEALASGGLSSLAKDCSFLKLAR
DEMAAAFQMQVTEVEEVAATLLKQRENSPISMEAIADTRL
NT seq
5523 nt
NT seq
+upstream
nt +downstream
nt
atggagcccacttctgcccaggatgacaaccagaagaaaaagcaacagaaggagaaagct
aagaaagcagcactggaacttccccccagacctccccggtctctgctctgcctcaccctc
aataacccagtgcgcaaggcctgcattgcccttgtggaatggaagcccttcgagatcatc
atcctactaactatctttgccaattgtgtggcactggctatctacctgcccatgcctgaa
gatgataccaacaaagtcaacactagactggagaagctggaatacttctttctgattgta
tttgccattgaggcaatgctaaagataattgcctatgggtttttattccatgcagacgcc
tacctccgaaatggctggaatgtactggattttaccatagtctttttgggagtcttaaca
gtgatcttggagagaatcagcttaattgagggtgcgcttctcagtgggcagggaggtttt
gacgtcaaagctctgagggcctttcgtgtgctgcggcctctacgcctggtgtcaggagta
ccaagcctgcaagtggtactgaactctatcatccaggctgtgttgccactgttccacatc
gctgtgcttgttgtcttcatgctcattatatatgccattgtagggcaggaactcttcaag
ggcaagatgcacaagacctgctattatgttggaacagacatcattgctacagtggaaaat
gaaaagccatctccatgtacaagcacaggccacggacgccattgcactatcaatggctct
gagtgcaggggctggtggccaggacctaataatggcatcacccactttgataactttggg
tttgccatgctgactgtctaccagtgtatctccatggaagggtggactgcagtcctctat
tgggtaaacgatgccattgggaatgagtggccctggatttactttatcagtctcatctta
cttgggtcattttttatccttaacttgatcctgggtgtgctcagtggtgagtttaccaaa
gagcgtgagaaagccaaatcacggggtaccttccaaaaactgagggaaaagcaacaatta
gaggaggacatgaaaggctacatggactggatcacccatgcggaagtcatggaatatgat
cgggcacatggtgaagggatgatgccattggatgaaggtggctcagagacagagagcctg
tatgaaattgagggaatgaataaatggattctcttcttccgacattggcggcggtggaac
cgtcttttccgcaggaaatgtcgtgaagtggttaagtccaagtttttctattggtttgtg
atcctgattattgctttgaacaccctcgcaatagcctctgagcatcactaccagcctgcc
tggctgactagcgcccaagatattgccaaccgggtgctgctggccctctttgcaattgag
atgattctgaaaatgtatgccctgggcctgcgtcagtacttcatgtccctattcaaccgc
ttcgattgccttgtggtgtgcactggcatcctggagattgtcctggtggaaattacttcc
atgtcaccactgggcatctctgttttgcggtgcattcgcctactgaggatcttcaagata
accaagtattggacctctctgaacaacttagtggcatcgttgctgaattcagtgcgctcc
attatctctctccttactctcctcttcctcttcatggtcatctttgcccttctagggatg
cagctctttggagggaagtttgattttgatgatacggagatacggcgtagcacctttgat
aacttcccccaggctctcatcagtgtcttccaggtcctgaccggagaagactggacttct
atcatgtacaatgcgataatggcctatggcgggccatgctaccctgggatgctggtctgc
atttacttcattattctctttgtctgtgggaactacatcttacttaatgtcttcttggcc
attgctgtggacaaccttgctgaggctgaaactttaacttctgcccagaaagccagtgct
gaagaaaagaagagaaggaaaatgggcagaggttaccctgagaaatctgatgaggaaaaa
ctgctgctggctaagaagctagaacagaaagccaagggagaaggaatccccaccacagcc
aagttgaaagtggatgagtttgaatcaaatgtcaatgagatcaaggacccctatccttct
gctgacttcccaggtgatgatgaggaagatgagcctgaaatcccactgagtcctcggcca
cgtcccctagcagagctgcagctgaaggagaaggcagtccccatgcctgaagccagttca
ttcttcatctttagcccaaccaacaagatccgtgtactgtgccaccgaatcgtcaatgcc
acctggttcacaaacttcatcctcctctttatcttgctcagcagcatctcactggcagct
gaagatccaatacgggctgattccttcaggaaccagatcctaggctattttgacattggc
ttcacttctgtgttcacagtggaaatagttctaaagatgactgcttacggagctttcctt
cacaaggggtccttctgccgcaactccttcaacatattagacttgctcgtggtagctgtt
tccctcatctctatgggaattgagtccagtgctatctcagtggtgaaaatcctaagggta
ctcagagtactgcgaccactgagagccattaacagagcaaaggggctaaagcacgtagtc
cagtgtgtttttgtggccatcagcaccattggcaatattgtacttgtcatggcattgcta
cagttcatgttcgcctgcattggagtgcagcttttcaaggggatgttctacagttgtaca
gatccaacaaagatgaccgaacaggaatgcaggggacatttcattacgtttatcgatgct
gatccaaaccagattgagctacataagcggatatggttgcacaatgagttccactttgac
aacgttttttcagccatgatgtctctcttcactgtatctacctttgagggatggcctcag
ctgctgtacaaagcaattgatagccacactgaggagatgggccccatatacaaccatcgc
atgggcattgctattttcttcatcatctatctcatcctcatagccttcttcatgatgaac
atctttgtaggttttgtcattgtaaccttccaggaacagggtgaaacagaatacaaagac
tgtgagctggacaagaaccagcgccaatgtgtccagtatgcactgaaagcacgccctctg
agatgttacatcccaaaaaatccctaccaataccaaatatggtatctggtgacctcttcc
tactttgagtacctcatgttcttcttgatcacactgaacaccatctgcttgggcatgcag
cattataatcaatcagagacaatgaaccaagtctcagatgtcctcaatgtggtcttcacc
ctcctctttactgtggagatgatccttaaacttatagccttcaaagctaagggctacttt
ggagacccttggaacgtctttgatttccttatagtcatcggcagcataattgatgtcatc
ttgagtcagattgatactgttcttgcttccagtggtggattgtactgcctaagcggtggc
tgtaatggcgttcctcctaccccagctaatgaagaaagtggtcgagtctcaatcaccttt
ttccggcttttccgtgtcctacggctggtaaaactgctgagccgaggagaaggaattaga
aacttgctctggacctttatcaagtccttccaggctctgcctcatgtggccttgctgatt
gtaatgctgttctttatctatgctgtaatcgggatgcagatgtttgggaaaattgctctg
gtggatggaacccaaataaatcggaacaaccactttcagactttcccacaagcggtacta
ctgctgttcaggtgtgcaacaggtgaggcctggcaggagatcttactggctgccagctat
gggaagcggtgtgaccccgagtctgaatatgcccctggggaagaaaacacttgtggcaca
ggctttgcttatttctacttcatcagcttctacatgctatgtgcattcctgattatcaac
ctctttgttgccgtcatcatggacaactttgactacctcacacgggattggtccatatta
ggcccacatcacctggatgaattcaagaaaatctgggcggaatatgaccctgaagccaag
gggcgcatcaaacatctagatgtggtaactctattgagacgaatccaacctcccctgggc
tttgggaagttttgtccacatcgtgtggcttgcaagcgcctggtgggcatgaatatgccc
ttgaatagtgatggtacagtcactttcaatgcaacactctttgctttagtgagaacggct
ctcaagatcaagaccgaaggtaactttgagcaagccaatgaagaactgaggatgattatt
aaaaaaatctggaagagaaccagcatgaagctcctggatcaagtcattccaccaattgga
gatgatgaggtgactgtgggaaagttctatgctaccttcctcatccaggaacacttcagg
aaattcataaagcgtcaggaagagtattatgggtaccggcccaagaagaatgctgtcgaa
atccaggctggcctgaggaccattgaagaggaagctgctcctgagatccatagagcaatc
tctggagatctgactgcagaggaggagctcgagagagccatggtggaggcagcaatggag
gaaggcatctataggaggacaggaggtttgtttggccacgttgacaccttcatggaaccc
agcagtcccctaccacctcatatggccaaccagaggcctctacaattcacagaagtgggg
agtgaagatttagactcccccgtcttccttgatgacttcccaccggaagggcactccaat
gtgaacaacagcaacaatgtgaacaacagcaacagcaatgttgacaacaatgcaacagca
tggatgacatatgagaatgaaataaagaaaaccaggctgccaccatctcataagctacct
gttctagacaaagaatgctttattggaactgaaaagcaacaaaggaatatgagcaaggtg
ccagcacacggtgacaagagctgtttggaactacagttgcccaaaaagaagcccattgtc
tcccaacgaaagccaaatgatggtgaagtgttgccgtctaggagcagcagtgaaggaacc
ccatcagggaacagtgaagaagtttctaccccagccactatccagctcgtccaggaggct
ctggcctctggtgggctcagctccctagctaaagactgttctttcctgaaactggcaaga
gatgaaatggctgctgccttccagatgcaggtgaccgaggtagaggaagttgctgccaca
ctgttgaagcaaagggaaaactcacctatatccatggaggccatcgcagataccagacta
tga
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