Hemicordylus capensis (graceful crag lizard): 128323447
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Entry
128323447 CDS
T08891
Symbol
COL14A1
Name
(RefSeq) collagen alpha-1(XIV) chain isoform X1
KO
K08133
collagen type XIV alpha
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
hcg00535
]
128323447 (COL14A1)
Proteoglycans [BR:
hcg00535
]
Extracellular matrix (ECM) proteoglycans
Others
128323447 (COL14A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
fn3
Collagen
VWA_2
VWA_3
vWA_SIBA-E
CBM_4_9
Motif
Other DBs
NCBI-GeneID:
128323447
NCBI-ProteinID:
XP_053102571
LinkDB
All DBs
Position
4:300328176..300561915
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AA seq
1901 aa
AA seq
DB search
MYPMAGMMVHHQLRTWSWFFFVFIAVTAQLMNGVQGQVAPPSRLRYTVVGHDSIQISWKA
PKGQFDGYKLLVTPNSGGKTDELTLQNSANKAIIQGLIPDQSYTVQLVAFAKDQESKAAQ
GQFRIKDIEKKKETSGKSKVKDVGIWKPASPTKDTESAPAPEAEESQFKCKSPAIADIVI
LVDGSWSIGRFNFRLVRHFLENLVAAFNVGSEKTRIGLAQYSGDPRIEWHLNTYSTKDAV
LDAVRNLPYKGGNTLTGLALTFILENNFKPEAGARPGIPKIGILITDGKSQDDVIPPAKN
LRDAGIELFAIGVKNADENELKEIASEPDSTHVYNVADFSFMNSIVEGLTKTVCSRVEEQ
EKEIKGTLVATVGAPTDLVTSDVTARGFRVSWTHAPGKVEKYRVVYYPTRGGQPEEVVVN
GSVSTAVLKNLMSITEYQIAVFAIYVSSASEGLRGTETTLALPMASDMELYDVSHSSMRA
KWSGVAGATGYMILYAPLTDGLAADEKEMKIGESSTDIELEGLLPNTEYTITVYAMFGEE
ASDPLTGQETTLPLSPPRNLKFSNIGHSSAKITWDPASKKVNGYRIMYVKTDGTETNEEE
VGHVSTHTLKSLTSLTEYTVAIFSLYDEGQSEPLTGSFTTKKVPSPQYLEIYEVSTDSFR
VSWKPPSSDVALYRLAWIPLGGEEGEEIVLSGEVDTHEIEGLLPGTEYEVSLVALFDDES
ESDVVAVLGTTFDTTTTEMTTITTTSTTTSKPTTAAFRTGIRNLVIDDETTSSLRVKWDI
SDYSVRQFRVTYLTASGDRGEEAVRMVMVPSRQNNLLLQPLLSDTEYKVMVTPIYSDGEG
ISLSVPGKTLPLSAPRNLRVSDEWYNRLRISWDAPPSPTMGYRIVYKPLNIPGPALETFV
GDDISTILILNLFSGTEYSVKVFASYSTGFSDALTGVAKTLYLGVTNLGAYQVRMTSLCA
QWQLHRHATAYRIAIESLVDGTQAEVLLGGGTPRHCFFELAPGTAYKISVYTQLHEIEGS
GVSIMETTLPFPTQPPPAPLTTTPQPTIPPAKEVCKAAKADLVFLVDGSWSIGDENFNKI
IGFLYSTIGALDRIGPDGTQVAIAQFSDDPRTEFKLNAYRTKETLLEAIQQIAYKGGNTK
TGKAIKHAQQALFTIDSGTRKGIPKVLVVITDGRSQDDVNKVSREMQLDGFSIFAIGVAD
ADYSELLNIGSKPSERHVFFVDDFDAFKKIEDELITFVCETASATCPLVYKDGSSLAGFK
MMDMFGLVEKEFATVEGVSMEPGTFNAYSCYRLHKDALVSQPTKYLHPEGLPSDYTITFL
FRILPETPQEPFALWEILNEEYEPLVGVILDNGGKTLTFFNYDYKDEFQTVTFEGPDIKK
IFYGSFHKLHVVISKTTAKVVVDCKQAGEKAINAAGNITSDGIEVLGRMVRSRGPRDNSA
PFQLQMFDIVCTTSWANRDKCCELPALRDEESCPSLPHACSCSEVSKGPNGPPGPPGGPG
LRGPKGNRGDHGPKGPDGPRGEIGAPGPQGPPGPQGPSGLSIQGLPGPNGEKGEKGEIGR
PGLQGVPGASGSPGRDGNQGQRGLQGKDGPTGPQGPPGPVGIPGAPGVPGVMGNVGPQGD
AGSPGLPGAKGERGERGDLQSHAMVRAVARQVCEQLIQGHLARYNSILNQIPSQSVSTRT
VPGPPGEPGRQGLPGSQGEQGSPGRPGFPGNPGQPGRPGERGLSGEKGERGNPGVGTQGP
RGPPGPAGPPGESRTGSPGPLGPPGPRGQTGHTGVPGPQGVAGQPGYCDPASCAGYGTGG
GYGDPTDQDIPVVPLPHNSYQLYDPEDLYDEEQQPYLAHGPYPHPQSSYPGPRLAQPEFT
PVREEMEAVELRSPGISRFTSRISKRSVNSPKRKRLTKKTS
NT seq
5706 nt
NT seq
+upstream
nt +downstream
nt
atgtatccaatggcagggatgatggtccatcatcagctcaggacatggagctggttcttc
tttgtcttcatagcagtcactgctcagttaatgaacggtgtccagggtcaagtggcccca
ccgtcaagattaagatatactgttgttggtcatgacagtattcagatttcatggaaagcc
ccaaaagggcagtttgatggatataaactcctcgtcactccaaattcaggtggaaaaacg
gatgagctcactcttcaaaacagtgcaaacaaagcaattattcaaggtcttatccctgat
cagagctatacggttcagctagtagcctttgccaaggatcaagaaagcaaggccgctcaa
ggccagttccgaattaaagatatcgagaaaaagaaggaaacctcaggtaaatccaaggtc
aaggatgtaggtatatggaaacctgccagcccaacaaaggatactgaaagtgcacccgct
cctgaagcagaagagagccaattcaaatgtaaatcgccagccattgcagacatagtgatc
ctcgtggatggctcctggagcattggcagattcaacttccggcttgtgcgtcatttcctg
gagaatctggttgctgccttcaatgtgggttctgaaaaaacaagaataggacttgcgcag
tacagtggagacccacggattgaatggcatttgaatacctatagcaccaaggatgctgtt
ttggatgcagtacgtaacctgccctataagggtgggaacaccttaacaggtcttgcctta
acttttattttggaaaacaactttaagcctgaggcaggagcaagacctgggatccccaaa
attggtatattgatcacagatgggaaatcccaagatgatgtcattccacccgcaaaaaac
ctgcgagatgctggcattgagttgtttgctattggtgtaaagaatgctgatgaaaatgaa
ctgaaagagattgcctctgaaccagacagcactcatgtctacaatgttgccgacttcagt
tttatgaactccattgtggaaggacttacaaaaacggtgtgctcaagagtagaagaacaa
gaaaaggaaataaaaggaacactggtagccacggttggggcgcctacagatttggtcaca
tcagacgtgacagccagaggattccgtgtgagctggacgcatgcaccaggcaaagtggaa
aaatacagagttgtctactatcctactagaggagggcaacctgaggaggtggtggtgaat
ggcagtgtttcaacagcagtattgaaaaacctgatgtctataactgaataccagatcgct
gtatttgccatatatgtgagttctgccagtgagggccttcggggtaccgaaactacgctt
gctttgccgatggcatccgatatggagttgtacgatgtgtcgcacagcagcatgagagca
aagtggagtggcgtagcgggtgcaactggctacatgattctgtatgctcctcttactgat
gggctggcagctgatgaaaaagagatgaaaattggagaaagctcaacagatattgaactg
gaaggtctgctgcccaatacagaatacaccatcacagtttatgcaatgtttggagaagaa
gccagtgatccccttacagggcaagaaacaacattacctttaagcccaccacggaacttg
aagttttcaaatatcggacacagctcggctaagataacatgggatcctgcttctaaaaaa
gtgaatggctatcgcattatgtatgttaagacagatggaacagaaaccaacgaggaggag
gttggtcatgtgtcaacacatactctgaagagcttgacgtctctcacagaatacacggtt
gccattttctccctctacgacgaggggcaatctgagcccctcactggcagcttcaccaca
aagaaagttccatcccctcagtatttggaaatatacgaagtctctacagatagttttaga
gtcagctggaagccaccctcttctgatgtagccctgtatcgactagcgtggattccactt
ggtggggaagaaggtgaagagattgtcttaagtggagaagtggacacacatgagattgaa
ggcttgctacccggcacagagtatgaggtgtccttggtggccctctttgacgatgaaagt
gaaagtgatgttgttgctgtccttggaaccacatttgatacaactactactgaaatgacc
accataactactactagtacgacaacttccaaacctacaacagcagcctttcgaacagga
ataagaaatctggttatagatgatgaaactacatcgagcttgagggtgaaatgggacatt
tcggactacagtgttcgtcagtttagggtgacgtacctcactgccagtggtgatcggggt
gaggaagcggtaagaatggtaatggtgccttcaaggcaaaataatttgctccttcagcct
ttgctctcagacactgaatataaagtgatggtcactccgatctactctgatggggaaggc
atcagtttgtcagttccgggcaaaaccttgccattgtccgcgccgcgcaatctgagggtg
tctgatgaatggtacaacagattgcgtattagctgggatgcccctccatcgcccacaatg
ggatacaggattgtatataagcccttgaacatccctggaccagcactcgagacctttgtg
ggagatgatatcagcactatccttattttgaatttgttcagtggaactgaatatagtgtt
aaagtgtttgcttcatactcaacaggattcagtgacgccttaacgggtgtggccaaaaca
ttgtacttgggtgtgacaaatctaggagcttatcaagtccgcatgacgagtttatgtgct
caatggcagcttcacaggcatgcaacagcatacaggatagcaatagaatctcttgttgat
ggaacacaagcagaagtactgcttggtggagggactccaagacactgtttctttgagctt
gcaccgggaacggcatataaaatcagtgtttatacacagctccatgaaatagaagggtcc
ggtgttagcataatggagacgacattaccattcccaactcagccaccaccagctcctcta
accaccacccctcaaccgacaattcctcctgcaaaggaagtttgcaaagctgcgaaggct
gacctcgtgtttttggtggacgggtcctggagtattggagatgaaaatttcaacaaaata
attggctttctgtatagcaccattggcgctcttgataggattgggcctgatggaactcag
gtggcaattgctcagttcagtgatgatccccggacagagtttaaactgaatgcctataga
acaaaggagacccttctggaagccatccagcaaatcgcatacaaaggaggaaatacaaaa
acaggcaaggcaataaaacatgctcagcaagccctatttaccattgattcggggaccaga
aagggaatcccaaaggttttagtggtgatcacagacgggcgatcacaggatgatgtgaac
aaagtctccagagaaatgcagctagatggatttagtatatttgccattggcgtagcagat
gccgattattcagaactgcttaacattggcagcaagcctagtgaaagacacgtcttcttc
gtggatgactttgatgcctttaagaaaattgaagatgaactgatcacttttgtctgtgaa
acagcatcagcaacttgcccattggtttacaaagatggcagcagcctagcaggatttaaa
atgatggatatgtttggtttggttgaaaaggagtttgcaactgtggaaggggtttctatg
gagcctgggacgttcaatgcctactcctgttacagactgcataaggatgccttagtttct
cagccaaccaaatatttgcacccagagggccttccttcagattacaccattacctttctc
ttccgtatactccctgaaacacctcaggaaccatttgctctgtgggagattttaaatgaa
gagtatgagccactggttggagttattttggacaatggtggcaaaaccttgactttcttt
aattatgactacaaggatgaattccagacagtgacttttgaaggaccggacataaagaaa
atattttatggaagtttccataagttgcatgttgttatcagcaaaacaacagctaaagtg
gtggttgactgcaaacaagctggtgagaaagcgatcaatgctgcaggcaatattacttct
gatgggatagaagtacttgggagaatggttcgatcgagaggaccaagggacaactctgca
ccattccagttgcagatgtttgatatcgtttgtaccacttcatgggccaatagagacaaa
tgctgcgaacttccagcattgagagatgaagaaagctgtccttcccttccccatgcttgc
tcttgttctgaagtcagcaagggacccaatggaccccctggaccaccgggtggtccaggc
ctcagaggtccaaagggtaaccgtggtgaccatggtccgaagggcccagatggacctcgt
ggtgaaattggagctcctggtcctcaagggcctcctgggccacaggggccaagtggactt
tctattcaaggacttccgggaccaaatggtgaaaaaggagaaaagggtgaaattggtcgt
cctggcctgcagggtgttccaggagcatctggatctccagggcgagatggaaaccaaggt
caaaggggtctgcaaggcaaagatggacccactggacctcaagggcctccaggacccgtg
ggaatacctggcgctccaggtgtgccaggagtgatgggtaatgttgggccccaaggtgat
gctggatcacctggtcttcctggagcaaaaggcgagaggggtgaacgaggagaccttcag
tcccatgcaatggtgcgggcagtagcccgtcaggtgtgtgaacagctcatccagggtcac
ctggctaggtataactccatcttaaatcagattccaagccagtctgtctcaacgcggact
gtccccggaccacctggggaaccaggtcggcaaggactccctggatcgcagggagaacaa
ggatctccaggaaggcctggatttccaggtaaccctggccagcccggaagacctggtgaa
agaggtttatcaggagagaagggagagcgaggtaacccaggtgttggaacacaaggcccc
cgaggccctccagggcctgcaggacctccgggcgaaagtcgaactggcagccctggcccc
ctgggtccaccaggcccgagaggacaaacggggcatacaggtgttcctgggccgcagggt
gtggcaggacaaccagggtactgtgaccctgcttcctgtgctggttatgggacagggggt
ggatacggggatccaaccgatcaagacatccccgtcgtgccattaccacataactcttac
caactctatgaccctgaagacctttatgatgaagagcaacagccctatctagctcatggg
ccctaccctcatccccagtcctcctatccagggcctcgtcttgctcaaccagagtttaca
cctgttcgtgaagaaatggaggcagttgaattgagatcgcctggaataagccgcttcaca
agtagaatctccaaaagaagtgtcaactctccaaagcgcaagaggcttactaagaaaacc
tcttaa
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