Hemicordylus capensis (graceful crag lizard): 128323450
Help
Entry
128323450 CDS
T08891
Symbol
SNTB1
Name
(RefSeq) beta-1-syntrophin
KO
K24064
beta-syntrophin
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Pathway
hcg04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
128323450 (SNTB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntrophin_4th
PH_17
PDZ
PH
PDZ_2
PDZ_6
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
128323450
NCBI-ProteinID:
XP_053102591
LinkDB
All DBs
Position
4:complement(300660250..300804186)
Genome browser
AA seq
571 aa
AA seq
DB search
MAVAAAGGGGVGGRVQRSGALEVLVRERWHRVLVSLSDEALVLSGEEASAAAAAATYNGI
GAAAAGSNGNGTFCSRGSAAAAGGGHSGAPVAACNLSGLGSPESPSVGGGSPQSGSMSGL
SSGVRTAFTDLPEQVPETISNKKRCVKVLKQEMGGLGISIKGGKENKMPILISKIFKGLA
ADQTQALYVGDAILAVNGTDLRDATHDEAVQALKRAGKEVQLEVKYMREATPYVKKGSPV
SEIGWETPPPESPRLGNSSTDPLSQLSLSIHRDKKTIPLKMCYVTRNMAVSDPENRLVEV
HSPDAKHTLILRSKDSVTAQAWFTAIHSCISDLIPKVISEVRDQLGKTGLAGGREIRHLG
WLAEKVLGENEKHWKPALVVLTEKDLLMYESMPRIKEAWFNPLHSYPLLATRLVHSGPGK
GSPQPGLDLSFATRTGTRQGIESHLFRTETSRDLSLWTRSIVQGCHNAAELSTEITTACT
YKNQECRLTIHYDHGFSLSTEPQDGAFPKTIVQFPYEKLKMSSDDGIRMLFLDFGGKEGE
MQLDLHSCPKPIVFIIHSFLSAKITRLGLVA
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atggcggtagcggcggccggagggggaggcgttggcggccgggtgcagcggagtggcgcg
ctggaagttttggtgcgcgagcggtggcaccgagtgctggtgagcctgagcgacgaggcg
ctggtgctgagcggcgaggaggcaagcgccgccgccgccgccgccacttacaacggcatc
ggggcagctgctgcgggcagtaacggcaatgggaccttttgcagcagagggtccgcggcg
gcggcggggggcggccactcgggcgcccccgtggccgcctgcaacctttccggcttgggg
tcgcccgagtccccgtctgtgggcggcgggagcccccaatccggctcgatgagcgggctc
agcagcggggtgcgcacggctttcaccgacctgcccgagcaagttcccgagaccatctcc
aacaagaagcggtgcgtcaaggtgctgaagcaggagatgggcggcctgggcatcagcatc
aaggggggcaaggagaacaagatgcccatcctcatcagcaagattttcaaagggctggcg
gccgaccagacccaggcgctctacgtcggggatgccatcctggccgtcaacgggaccgac
ctgcgggacgccacccacgacgaagccgtgcaggcgctcaagagggcgggcaaggaggtg
cagctggaagtgaaatacatgagggaggccaccccctatgtgaagaaaggttctcctgtt
tctgaaattggatgggaaactcccccacctgaatcccctcggttgggaaactcgtccact
gaccccttgtcgcagctgtctctctccatccacagagacaagaaaacgattccactcaaa
atgtgctacgtgacacggaacatggctgtgtcagacccagaaaacaggcttgttgaagtc
cactcacctgatgccaagcacactctgattctaaggagtaaagattcggtcacagcccaa
gcctggttcactgctatccactcctgtatcagtgacctcattcccaaggtcatctcagaa
gtcagagatcagctgggcaaaacagggcttgcaggaggccgagagattaggcatctgggt
tggctggcagaaaaggtgttgggtgagaatgagaagcactggaaaccagcactggtggtc
ttgactgagaaggatcttctgatgtacgagagcatgccaagaatcaaggaagcttggttc
aatcctcttcattcctatcccctactggccacaaggttggtgcattctggccctggaaag
ggctctccacagccggggctggatttgtcctttgctactcgtacaggcacacggcaaggg
attgaaagccatcttttcaggactgagacgagccgagacctctcactgtggacacggagc
attgttcagggttgtcacaacgcggcagagctctccacagaaataaccaccgcttgcacc
tacaaaaaccaggagtgccgtttgaccatccattacgaccacggattctctctctcaact
gaaccccaagatggtgcctttcccaaaacaattgtacagtttccctatgaaaaactaaaa
atgtcctcagatgatggaattcggatgcttttcttagactttggagggaaagaaggtgaa
atgcaactggaccttcactcttgtccaaagcccattgtgttcatcattcattcattcctt
tctgccaagattacaagacttgggttggtagcataa
DBGET
integrated database retrieval system
