KEGG   Hemicordylus capensis (graceful crag lizard): 128323660
Entry
128323660         CDS       T08891                                 
Symbol
COP1
Name
(RefSeq) E3 ubiquitin-protein ligase COP1 isoform X1
  KO
K10143  E3 ubiquitin-protein ligase RFWD2 [EC:2.3.2.27]
Organism
hcg  Hemicordylus capensis (graceful crag lizard)
Pathway
hcg04115  p53 signaling pathway
hcg04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:hcg00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    128323660 (COP1)
 09140 Cellular Processes
  09143 Cell growth and death
   04115 p53 signaling pathway
    128323660 (COP1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:hcg04121]
    128323660 (COP1)
Enzymes [BR:hcg01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     128323660 (COP1)
Ubiquitin system [BR:hcg04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    128323660 (COP1)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     128323660 (COP1)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz Beta-prop_TEP1_2nd WD40_WDHD1_1st Beta-prop_EML_2 zf-C3HC4_2 Beta-prop_EIPR1 WDR55 Beta-prop_RIG_2nd EIF3I Beta-prop_WDR19_1st Beta-prop_TEP1_C zf-C3HC4 Beta-prop_CAF1B_HIR1 zf-RING_2 zf-RING_UBOX Beta-prop_EML Beta-prop_DCAF4 zf-C3HC4_3 zf-RING_5 Beta-prop_WDR90_POC16_2nd zf-C3HC4_4 WD40_RFWD3 RING_XB3-XBAT31 Beta-prop_WDR35_TULP_N Beta-prop_Vps41 WD40_like Beta-prop_IFT140_1st Beta-prop_DCAF12 Beta-prop_IFT122_1st zf-rbx1 zf-RING_10 zf_C2H2_10 zf-RING_11 Sina_RING
Other DBs
NCBI-GeneID: 128323660
NCBI-ProteinID: XP_053103174
LinkDB
Position
4:159570930..159801299
AA seq 724 aa
MSGSRPPPQHPPAGPGTTTGPLGSSSSSAAAASSVTTSASSATATAPGSSSSTSAGLGAP
ARPVLVAPAVSGSSNGGLSRLAGTARTGAGCGTGGGGGGGGSSRKRPLPTPLCNGLLNSY
EDKSNDFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLFPNF
LVNELILKQKQRFEEKRFKLDHSVSSTNGHRWQIFQDLLGTDQDNLDLANVNLMLELLVQ
KKKQLEAESRAAQLQILMEFLKVARRNKREQLEQIQKELSVLEEDIKRVEEMSGLYSPVS
EDSTVPQFEAPSPSHSSIIDSTEYTQAPGFSGSSQTKKQPWYNSTLASRRKRLTAHFEDL
EQCYFSTRMTRVSDDSRTSSQLDEFQECLSKFTRYNSVRPLATLSYASDLYNGSSIVSSI
EFDRDCDYFAIAGVTKKIKVYEYGTVIQDAVDIHYPENEMTCNSKISCISWSSYHKNLLA
SSDYEGTVILWDGFTGQRSKVYQEHEKRCWSVDFNLMDPKLLASGSDDAKVKLWSTNLDN
SVASIEAKANVCCVKFSPSSRYHLAFGCADHCVHYYDLRNTKQPIMVFKGHRKAVSYAKF
VSGEEIVSASTDSQLKLWNVGKPHCLRSFKGHINEKNFVGLASNGDYIACGSENNSLYLY
YKGLSKTLLTFKFDTVKSVLDKDRKEDDTNEFVSAVCWRALPDGESNVLIAANSQGTIKV
LELV
NT seq 2175 nt   +upstreamnt  +downstreamnt
atgtcaggaagccggccgccaccacaacaccctccggctgggccgggcaccactacaggc
cccctcggatcctcctcgtcgtccgccgccgccgcctcttcagtcaccacctcggcctct
tcggccaccgcgacggcgcccggttcctcgtcttcgacttcggcggggctgggagcccct
gcgcggcctgtgttggtggcgcccgccgtctccggttcctccaacggtggcctttcgcgg
ctggcggggacggcccggaccggcgcggggtgcggcacaggcggcggcggcggcggcggc
ggcagcagcagaaagaggccgctgcccaccccgctctgcaatggcctcctgaactcctac
gaggacaagagcaacgacttcgtgtgccccatctgctttgatatgattgaagaagcttac
atgactaaatgtggacacagcttttgctataagtgtattcatcaaagcttggaggacaac
aacagatgtccgaaatgtaattatgttgtggataatatagaccatcttttccccaacttt
ttagtgaatgaactcatccttaaacagaagcaaaggtttgaagaaaagagattcaaactg
gaccattcagtgagtagcaccaatggccataggtggcagatatttcaagatttgctggga
acagatcaggataaccttgatttggctaatgttaatttaatgctggaactactggtccag
aaaaaaaaacagcttgaagcagagtcccgtgctgctcaactacagattttgatggaattc
ctcaaagttgccaggagaaataaaagagagcagttggagcagatccagaaggagctaagt
gttctggaagaagatattaaacgagtggaggaaatgagtggcttgtattccccagtcagt
gaggacagcactgtgcctcagtttgaagctccctcaccttcacacagtagcatcatagat
tctacagaatacacccaggctcccggatttagtggcagttcccagacaaaaaaacagcca
tggtataacagtacgttagcatccaggaggaagagacttacagctcattttgaggatttg
gagcaatgctacttttccacaaggatgactcgagtatcagatgacagcagaacctcaagt
cagctggatgaatttcaggagtgcttgtccaagttcacgcgctacaattctgtccgaccc
ttggcgacactctcttatgctagtgacctctacaatggatcaagcatagtatccagtatt
gagtttgatcgagactgtgactattttgccattgctggagtgacaaagaagattaaagtt
tatgaatatggcacagttatccaggatgcagtcgatattcattaccctgagaatgaaatg
acttgtaattccaaaatcagctgtatcagctggagtagttaccacaaaaacctgttggcc
agcagtgactatgaaggtaccgtcatcttgtgggatgggttcacagggcaacggtcaaaa
gtctaccaggagcacgagaaaagatgttggagtgtggactttaatttgatggatcctaaa
ttgttggcttcaggctctgatgatgcaaaagtgaagctgtggtcaaccaacttggacaat
tcagtagcaagtattgaggccaaggcaaacgtgtgttgcgtcaaattcagcccatcatca
aggtaccatctggcctttggttgtgcagatcactgtgttcactactatgatcttcggaac
actaagcagccaatcatggtcttcaaaggacatcgcaaggctgtttcatatgcaaagttc
gttagtggggaggaaatagtttctgcgtcaacagacagtcagctgaagctttggaatgta
gggaagccacactgtctgcgttcctttaagggtcatatcaatgagaagaattttgtaggc
ttggcatctaatggagactatattgcctgtggaagtgaaaataactccctctacttgtac
tacaagggcctctcaaagacactgctaaccttcaaatttgacactgtcaaaagtgtccta
gacaaggaccggaaggaggatgacacaaatgagtttgtcagtgctgtatgctggagagca
ctgccagatggggagtccaatgtactgattgctgctaacagtcagggtacaattaaggta
ctggagctggtatga

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