Hemicordylus capensis (graceful crag lizard): 128323748
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Entry
128323748 CDS
T08891
Symbol
NHLRC1
Name
(RefSeq) E3 ubiquitin-protein ligase NHLRC1
KO
K10602
E3 ubiquitin-protein ligase NHLRC1 [EC:
2.3.2.27
]
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Pathway
hcg04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
128323748 (NHLRC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hcg04121
]
128323748 (NHLRC1)
Enzymes [BR:
hcg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128323748 (NHLRC1)
Ubiquitin system [BR:
hcg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
128323748 (NHLRC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
zf-RING_5
zf-RING_2
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_3
RING_XB3-XBAT31
zf-C3HC4_4
Baculo_IE-1
zf-C3HC4_2
Prok-RING_4
zf-RING_4
DUF4668
Motif
Other DBs
NCBI-GeneID:
128323748
NCBI-ProteinID:
XP_053103414
LinkDB
All DBs
Position
4:complement(216842568..216845842)
Genome browser
AA seq
400 aa
AA seq
DB search
MSTKATEKMQITTELIDQTETSLLECKVCFEKYSQQKKQRPKNLPCGHVMCLECVLSLAH
PRNFKLECPFCRRACKSSETSDCLPLLHLMEILNPSVNNALVPGRKIGRGEDLATSVSQV
LTFSLSFGGWGTLINPTGIAVCQRSGCVAVAHDGKKRIKLFTFNGSCIQQFGERGEAGND
IRYPTDVTVTLDGHIVVTDSGDRSVKVFDFNGRGKLVISESFCLPWGLDTMPQNDIIMTD
SDAGVLYRLTADFKRGELKGVKKMCSNLCNPRKVAVSQTSGAITVIEHMMGKGPSYSSIR
VKIFSADMKFISQVDSFGLSLVFPSKISASAVAFSREGHIIITDAYNQAIFCLGKPEEFP
VCKPLVTQGLSYPLALTYTEDNSLIVLDSGDHSLKVYTTS
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgtctaccaaggctactgagaaaatgcaaatcacaacagagctgattgatcagacggag
accagtctgcttgaatgcaaagtgtgctttgaaaaatacagccagcagaaaaaacaacgg
ccaaagaacttaccatgtggacatgttatgtgcctggagtgtgtcttgtctttagctcac
ccccgcaatttcaagttggaatgtcctttctgtcgaagagcttgcaagtcttctgagacc
agtgactgcttacctttgttacacctgatggaaatcttgaacccttcagttaataatgct
ctggttccaggaaggaaaattggaagaggtgaggatttggctacatcagtatctcaagtc
ttaacattcagtctttcttttggaggatgggggacactgatcaatccaacaggcatcgct
gtgtgtcagaggtctggctgtgtagcagtagctcacgatggcaagaagaggattaagctg
tttactttcaatggaagctgcatacagcaatttggagaaagaggagaggcaggaaatgac
atcaggtatccgaccgatgtcacagtcacgttggatgggcacatcgttgtcaccgacagt
ggggaccgttctgtcaaagtgtttgattttaatggcagaggcaagctagtaatctcagaa
tctttttgtttaccatggggtctggatactatgcctcagaatgatattatcatgactgat
tcagatgcaggtgttttgtaccgcttgacagctgactttaaaaggggggaattaaaggga
gtgaaaaagatgtgttctaacttgtgtaacccaagaaaggtggctgtttctcagacctct
ggagctatcacagtaatagagcatatgatggggaaaggtccaagctacagcagcatacga
gtgaaaatcttcagtgcagatatgaagttcattagtcaggtggacagttttggcctcagt
ctagtatttccttccaaaatcagtgccagtgccgtagccttcagcagggagggtcatata
ataataacggatgcctataaccaagcaatattttgccttggaaaacctgaagagttccct
gtatgtaaacccctcgttacccagggtctgtcttaccctttggccctgacttacacagaa
gataattctctgattgtcttagatagtggagatcattctttaaaagtgtataccactagc
tga
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