Hemicordylus capensis (graceful crag lizard): 128323989
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Entry
128323989 CDS
T08891
Symbol
TNN
Name
(RefSeq) LOW QUALITY PROTEIN: tenascin-N
KO
K06252
tenascin
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Pathway
hcg04510
Focal adhesion
hcg04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
128323989 (TNN)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
128323989 (TNN)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
hcg00536
]
128323989 (TNN)
Glycosaminoglycan binding proteins [BR:
hcg00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
128323989 (TNN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
Fibrinogen_C
EGF_TEN
Ig_DSCAM-DSCAML_C
EGF_Teneurin
DUF4998
Pur_ac_phosph_N
Fn3_Dep-1_2nd
EGF_2
DUF4959
EGF_Tenascin
T7-like_gp67
Motif
Other DBs
NCBI-GeneID:
128323989
NCBI-ProteinID:
XP_053104005
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All DBs
Position
4:complement(160496288..160581482)
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AA seq
1120 aa
AA seq
DB search
MAFGNFFLAILLHHTLQAALAQLPAQTETCSGKSQKISLSHSYKIDVPKSSQIKMEPDPL
PLQDDSHILLLGGEADEGEEQNIIFRHNIRLQTPKGDCEILGQLKALLGRLEKMEMELVH
LREACSPQKCCGRGRGVSSCSGHGTFLQEICGCNCDEGWEGQDCSRPKCPGNCNGNGRCI
GGRCVCNVRYAGEDCSQLLCPENCSGNGLCINGVCQCYKEFIGDDCSEKRCPNDCSGNGY
CDAGECYCEDGFIGLDCSKVLAPWNARILKSSEDSLNIGWDKVMDVDYYLISYFPTGHEA
SVKQVRVPKDQISYEILGLLPGTKYIITLHNVKKGVSSDPELLQASTTVSSVGAIWVTEK
TENSLEVEWENPATEVDYYKLRFSSLLGQGGEQEVVVPKSSDPKSRYIITGLIPGTQYKI
TVISMKDEMEGKPSSVIGRTEIDIPQNLVTEEVTEDTATISWDKVQALIDRYTARCTSAD
GDTKEVSVGADESSTTLTGLSPDKEYIIYIWAEKGNQQSERANTKVVTEIDSPXNLHTDQ
VTESTASSSWSDVQAHIDKYMVNYTSADGESKELSVGKDKRRTVLTDLRPGMDYYIYIWA
KREAQQSKRMSIKAVIDIDGPTNLVTDQVTEDTATISWNGAQAPIDRYVVSYTSVDGDIK
EMSVGKDKTTTTLMGLKPGTEYTIYIWAAKGTQQSRKASTSAVTEIDGPTNLTTDQATEN
TATVSWNKALAPIERYILRYTSTDGETREITVGRDKSSTTLTGLKPGMEYIISIWAVKGS
QQSKRTNTRAETDIDPPKNVRASDITQSSGVITWLPPDAQISGYLLTYDEPDGTSTEVKL
GPNDRKVVLQGLSRGTEYTIHIIAFKGDRWSRKAATTFSTVNILYPYPADCSQTQQNGHS
TSGIYTIYLNGDLNKPLQVYCDMTTDGGGWIVFQRRNTGQLDFFKRWRNYVEGFGEPTEE
FWLGLEKLHELTSTASTPYELRVDLRTHNDSAYAAYDRFQVASSRDRYKLSVGKYRGTAG
DAMTYHNGRKFTTWDRDNDIAITNCAITHHGGWWYKNCHLANLNGKYGEHKHSEGVNWEP
WKGHLFSLPYTEMKIRPRTHNFVPILGRKKRSLIMKRKEL
NT seq
3363 nt
NT seq
+upstream
nt +downstream
nt
atggcatttgggaatttctttctggcaattctgctgcaccacacactccaggcagccctg
gcacagttgcctgctcagacggagacctgttctgggaaaagccagaagatctctctcagc
cactcatacaagattgatgtgcccaagtcctctcagatcaagatggagccagaccctctg
cccctccaagatgacagccacatactgttattgggtggggaagcagatgagggtgaggag
caaaatatcattttcaggcacaacattcggctgcagactcccaaaggtgactgtgaaatc
cttggccagctcaaggccttgctgggaaggctggagaagatggagatggaactggtgcat
ctgagggaagcctgtagccctcaaaagtgctgtgggagaggccgaggggtttcatcctgt
agtggccatggtacgttccttcaggaaatttgtggctgcaactgtgatgaaggctgggaa
ggtcaggactgttcccgccccaagtgtcccgggaattgcaatggcaacgggcgctgcatt
ggtggccggtgcgtgtgcaatgtacgttatgctggtgaggactgcagccagctcctctgc
cctgaaaactgcagtggaaacggcctctgtatcaatggtgtatgccagtgctacaaggaa
ttcattggggatgactgcagtgagaagaggtgccccaatgactgcagtggcaacggatac
tgtgatgccggcgagtgttactgtgaggatggcttcattgggcttgactgttcaaaagtg
ctcgctccttggaatgcacgaatcctaaagtcttcagaagattccctgaacatcggatgg
gacaaagtgatggatgtggactattacctcatcagctactttcccactgggcatgaggct
tctgtgaagcaagtgcgagtgcctaaggaccagatcagctatgaaatcctgggccttctt
cctggcacaaagtatatcatcacacttcacaatgtaaagaagggggtttccagtgatcca
gaactcctgcaagctagcacaactgtttcttctgttggtgcaatctgggtgacagagaag
acagaaaattcgctggaagtcgagtgggagaatcctgccacagaggtggattattacaag
ttgaggttcagctccttgcttgggcaaggaggggagcaggaggtggtggtgcccaagagc
agtgacccaaagagcagatatatcatcacgggtttgataccaggaacacagtataaaatc
acggtcatatccatgaaggatgagatggaagggaagccatcctctgtgattggcaggaca
gaaattgacatcccccaaaatctagtgactgaggaagtaacagaggatacagctacaata
tcctgggacaaggtccaggctctcatagatcgatatacagcacgatgcacttctgcagat
ggagacaccaaagaggtatctgtaggggcagatgaaagcagcactaccctgacgggattg
agtccagacaaggagtatatcatctacatctgggctgaaaaggggaaccagcagagcgag
agggcaaacactaaagttgtgacagaaattgacagccccnaaaatctacatacagaccaa
gtgacagagagcacagcctcctcctcttggagtgatgtccaggctcacattgacaagtac
atggtgaactacacttctgccgatggtgaatccaaagaattatctgtgggcaaagataag
aggagaacagtcctgacagatctgagaccaggcatggactattacatctacatatgggcc
aagagggaagcccagcagagcaaaaggatgagcattaaagctgtgatagacattgatggc
cccaccaatctggtaactgaccaagtaacagaagacacagctaccatatcttggaatggg
gctcaggctcccatagacagatatgtagtgagttatacctcagttgatggggacatcaaa
gagatgtctgtgggaaaggacaagacaactacgaccttgatgggtttgaaaccaggcacg
gagtataccatctacatctgggctgcaaagggaacccagcagagcaggaaggcaagcaca
agcgctgttacagaaatagatggccctacaaacctgacaacagaccaggcaacagagaac
acagccactgtctcttggaacaaggccttggctcccatagagcggtacattctgaggtac
acctctactgatggagaaactagagagataacagtgggaagggataagagcagcaccact
ttgactggactgaagccaggcatggaatacatcatctccatctgggctgtgaagggaagc
cagcagagcaagaggacaaacacaagagccgagacagatattgatcctcccaagaatgtc
cgtgcatcagacataacacaatccagtggagtgatcacatggttacctcctgatgctcag
atcagtggctatcttctcacctatgatgagccagatggcaccagcacggaagtgaaacta
ggtcctaatgaccgaaaggttgttctacaaggccttagtcgtggcactgagtacaccata
catatcatagcttttaagggagatcgctggagcagaaaagcagccaccaccttttctaca
gtcaatattctctatccctaccctgcggactgcagccagacccagcaaaatggacattcc
accagtggcatctacaccatctatctgaatggcgacctcaacaagcccctgcaggtttat
tgcgacatgaccaccgatggaggtggatggatagtgtttcagaggcggaacacaggacaa
ttggatttctttaagcgctggagaaattatgttgaaggctttggagaaccgactgaggaa
ttttggcttggccttgaaaagctgcatgaactcaccagtactgcttctactccctatgag
ctgagggtggatttgcgaacccacaatgattccgcctatgctgcctatgaccgcttccag
gtggcctccagcagggacagatacaagctctctgtggggaagtacagaggcactgctggg
gatgccatgacttaccataatggtcggaaatttaccacctgggacagggacaatgacata
gctatcaccaactgtgcaataactcaccatggtggctggtggtacaagaactgccacttg
gccaacctcaatggcaaatatggagaacacaagcatagtgagggagttaactgggagcca
tggaaaggccatttattctctctcccttacactgagatgaagatacgtcctcgtactcat
aactttgtgccaattctgggcagaaaaaagcggtctctgatcatgaagaggaaggagctt
taa
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