Hemicordylus capensis (graceful crag lizard): 128324081
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Entry
128324081 CDS
T08891
Symbol
NDC1
Name
(RefSeq) nucleoporin NDC1 isoform X1
KO
K14315
nucleoporin NDC1
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Pathway
hcg03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
128324081 (NDC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hcg03019
]
128324081 (NDC1)
Messenger RNA biogenesis [BR:
hcg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
128324081 (NDC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ndc1_Nup
GP41
Motif
Other DBs
NCBI-GeneID:
128324081
NCBI-ProteinID:
XP_053104185
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All DBs
Position
4:complement(95806878..95832533)
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AA seq
676 aa
AA seq
DB search
MSPATREQQLLLRRQILGWRAAASIAWSVLLLPLCTAAFISISSIDFFHPVQWITNSFND
LYTSYVIFCVLLMSVVILIISIFNVEFHAVVPSISCSRLALISKIIHPQQVIHSVAHAVM
GMLVAWCAAVMMKGKFQFLSASCTATESTADAIPPICLNEYHLFLLFLGAFMGYSYSLRY
LVNNMNYLPFPIIQQYKYLRFRRSLPLLVKHSCVESLYMVRNFCAAYYFFGYIPRAWIIT
TMNFHTDSQLHPLDTVAGLLDLSLLYHSWLCGVFLLITWYIAWLLFRIYATEAYHFPVQP
TFTEETDQCLPKILNSSPPPILKFLALQDLMFLSQYSPMRRQEVFSLSQPGGHPHNWTAI
SKECLNLLSNLTQKLITHQEAAAANGRLKQPSEGDLTPSPSPPGVAAEESSFQTPKTSIL
PRAHMPSLVKSSLLPLKASPVSDLGSNLGSPFNPLQSRKAGILELSSPWHGSVQSPHIMR
RGPKLWTSNSDLEWTSSPYEPFSATATGKVANEAVRPSSIYTWLQNKKEQVKSFLSKRVL
IMYFFSKHPEASIQDLFSDTQMHIWALEGLSHLVAASFTEDRYGVVQTTLPAVLNTLLTL
QEVVDKHFKLPHVSSKPPRISGNLADTSYKTLRFALRTSLKTAIYRITTTFGEHLNAVQV
SSEHKKRLQQFLEFKE
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgagccccgccacacgcgaacagcagctgctgctgcggcggcagattttgggatggaga
gctgctgcaagtattgcttggtctgtgctgctgcttcccttgtgtactgcagccttcatc
agcattagcagtattgacttcttccaccctgtacaatggatcacaaattcattcaatgat
ttgtatacctcctatgttatattttgtgttctactgatgtctgtcgtgattctgataata
agtatcttcaatgttgaatttcatgcagttgtgccatctatttcttgttctcgattagca
ctgataagcaagattatccatccacagcaggtgatccattcggttgcccatgctgtcatg
gggatgctggtggcttggtgtgctgccgttatgatgaaggggaaattccagttcttatct
gcatcttgtacagctacagaaagtacagctgatgctattccacccatatgtctgaacgag
taccacctcttcctcttgttccttggtgctttcatgggttacagctatagtctccggtat
cttgttaacaatatgaactatcttccgtttccaatcatacagcaatataagtatctgcgc
ttcagaagatctctgcctttgttggtgaaacacagttgcgtggagtcgctgtatatggtt
aggaacttctgtgctgcttactacttctttggttatattccaagagcatggataattacc
acaatgaattttcacactgatagccaacttcatcctttagacacagtggctggtctcctg
gatttgtctcttctataccacagctggttatgtggtgtgtttcttctgattacctggtac
attgcatggttgctcttcaggatctatgctactgaggcatatcactttcctgttcagcca
acttttacagaagaaacagaccagtgtttacctaaaattttaaacagcagtcctccacct
attttaaagttcttggctttgcaggacctcatgtttctttcccagtattctcctatgcga
cggcaagaggtcttcagccttagccagccaggtggacatcctcacaactggactgcaatt
tccaaagagtgcttgaatcttctaagtaatctgacacagaagctgataacacatcaagaa
gctgcagctgcaaatgggagactgaaacagccttctgagggagatttgacaccgtctccc
agccctccgggagtagctgctgaagagagctcatttcaaacgccaaagactagcattctt
cctcgagcccatatgccttctcttgttaagtcatctctgctgcctttaaaagcttcgcct
gtatctgatcttggaagcaatttaggatctcctttcaatcctcttcaaagccgcaaagca
ggaatactggagttaagctctccttggcatggatctgtccagagtccccatattatgaga
agaggaccaaagctatggacatcaaattcagatctggagtggacaagctctccttatgaa
cccttttctgcaactgccactggaaaagttgctaatgaagcagtgcgaccaagttctatc
tatacgtggctgcaaaacaagaaagagcaggttaaaagtttcttgtcaaaacgggtgcta
ataatgtattttttcagcaagcaccctgaggcctcaatccaggatctcttttctgatacg
caaatgcacatttgggctttggaaggtttatctcacttagttgcagcctcatttactgaa
gatcgatatggagttgtccaaacaactttgccagctgttctgaatactttgctaactctt
caggaggttgtagacaagcacttcaagcttcctcatgtttccagcaaaccccccaggatt
tcagggaatctagcagatacttcctacaaaaccctccggtttgctttgaggacatcactg
aaaactgctatctatcggataactaccacttttggagaacacttaaatgcagtgcaagta
tcctcagaacataagaaaaggctacagcagttcctggagttcaaggaatag
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