Hemicordylus capensis (graceful crag lizard): 128324376
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Entry
128324376 CDS
T08891
Symbol
TRMT13
Name
(RefSeq) tRNA:m(4)X modification enzyme TRM13 homolog
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hcg03016
]
128324376 (TRMT13)
Enzymes [BR:
hcg01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
128324376 (TRMT13)
Transfer RNA biogenesis [BR:
hcg03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
128324376 (TRMT13)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TRM13
zf-TRM13_CCCH
zf-U11-48K
NNH6
Methyltransf_32
OrgC
DUF5320
Motif
Other DBs
NCBI-GeneID:
128324376
NCBI-ProteinID:
XP_053104855
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All DBs
Position
4:131016436..131027898
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AA seq
473 aa
AA seq
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MAAEPVVSVSPPAERCAYFVERKRRFCKMVPAQGRRFCGEHGDQEEEDGRKRIPCPLDPK
HTVYEDQLQKHLKKCNSREKPKPVYFVQDINAGLKDATELTEEREVPISALSKEKLDDLT
GKLRRASDSIKSVLKDQILSHHALEKALNDPKNGDAAVKHLKQQASILGNMDRLHLLGPG
RCFVEFGAGRGKLSHWVDIALQDAKDVHFLLVERATTRFKVDGKHRKNGFERLQVDIQHL
CLNKVPVLVKEKLPVIGIGKHVCGAATDLALRCLVETYAELSDKKEGPAPKRFKSDGTHV
ASHYPPDETCGKSVTENWSPVAGIVVALCCHHKCNWKHYVGQEFFTSAGLGAVEFNYFKR
MTSWATCGMRETATKTSTTSMKNEEQSSEAEELEQEYRSVESSLDSLQRLLTSEERKQIG
RLCKLLIDHGRIEYLQQRGYKAVLQHYTDLNVSLENVLLTAVPCQSSLCPSTA
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggagcccgtcgtgtcggtttctcctccagctgagcgatgcgcttatttcgtc
gagcggaagagacgcttctgcaagatggtcccggcccagggaaggcgcttttgtggggag
catggcgaccaggaggaagaagatggcaggaaaagaattccctgccctttggatccaaaa
catacagtatatgaagatcagctacaaaaacacttgaaaaaatgtaattcaagagagaag
ccaaagcctgtctactttgttcaagatattaatgcaggattgaaagatgccacagaattg
actgaagaacgggaggtaccaatttctgctctgtctaaagaaaagttagacgacttaact
ggaaaactaagaagagcaagtgacagtataaagtctgtacttaaggaccaaattctttct
catcatgccttagaaaaggccctaaatgatccaaaaaatggagatgctgctgttaagcat
ttgaagcaacaggcttctattttaggtaacatggacagacttcatttgcttggaccaggg
agatgttttgttgaatttggagctggacgaggaaagctgtcccactgggttgatatagcc
ttgcaagatgctaaagatgttcattttcttcttgttgaaagggcaaccaccagattcaag
gtagatggcaagcacagaaaaaatggatttgaaagacttcaagttgatatccagcactta
tgtttaaataaagtacctgttcttgtgaaagagaagctaccagtgataggaattggcaag
catgtctgtggtgctgcaacagatcttgctttgagatgtttagttgaaacctatgcagaa
ctctctgataaaaaggaaggtcctgcacctaaacgcttcaagagtgatggaacccatgta
gcttctcattatcctcctgatgaaacatgtggcaagtcagtaactgagaactggagcccc
gtggctggaattgtggttgcactatgttgccatcacaagtgtaactggaagcattatgta
ggccaagagttcttcacctcagcaggacttggggcagtggaatttaattattttaaaaga
atgacaagctgggccacttgtggcatgagagaaactgcaacaaaaacctctacaacttcc
atgaagaatgaagaacaaagcagtgaggcagaagaacttgagcaagagtacagaagtgta
gagagcagtttagatagtctgcaacggctgctaaccagtgaggaacgaaagcagataggt
cgcctttgtaaactgctgattgatcatggccggattgaatatttacaacagagagggtat
aaagctgtattgcagcactatacagatctcaatgtgtccttagaaaatgtgcttttgaca
gctgtaccatgtcagtcttcattatgcccctcaactgcataa
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