Hemicordylus capensis (graceful crag lizard): 128324630
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Entry
128324630 CDS
T08891
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM56-like
KO
K12026
tripartite motif-containing protein 56 [EC:
2.3.2.27
]
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hcg04121
]
128324630
Enzymes [BR:
hcg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128324630
Ubiquitin system [BR:
hcg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
128324630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4
zf-B_box
zf-RING_UBOX
zf-C3HC4_2
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
128324630
NCBI-ProteinID:
XP_053105390
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All DBs
Position
4:complement(81360557..81367510)
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AA seq
682 aa
AA seq
DB search
MAAQVSTSLQELIREDFLTCKICYDLYVVPKILPCLHSYCQRCLEPLVGNGTLQCPECRL
QAEVPAGVASLKTNFFINSLLELFQMKHNKDLECMICSNAERIVAATSRCLDCKDFLCQT
CSYGHCCSRLTLHHKVVNLEEFLAGHYDTEARFLQELCCQDHPQEALRFFCDSCSVSICR
DCRMLDHFEHKVVSMASAAQRERPSVEQLIKSLEATITCITEQEKAAEEVMEKLKAEAEW
IKEKICKYVEDTTAYIFAQKESALAKLNGFLTDQLEEFCLSQKELQSQKDKAVSTQEFSQ
RILSVGKDYEILHLKGMIRNRAEELQKIRLQQFPSKAPELVIAWDESQQLSEAPLFSLVI
PGEQPKRDMQHLEPDSFDQESDEITDSDSSEDLCIGMSNSPTKSSSSYPVWRVKVDYSHS
LERDLFCTPNITGIAFVPDTSHILLLDKANDVIKKYSPEGQFQQVLPLPASDSDFSGISV
CGEILACSSETYLFFLTLDGQFLRKLQMRGSESSYPLTSYRDSYVAVSEGTLCSISLYNP
SGLCVGRIQPANYQGGKFLFIAVNSCEEFVVSDFLKKQIVILEKSGLVLGLLGSSTSLLT
KPFSVCVDGKRNIFVVDQFKVIHFSPNSEIGEVILNDQCQVGRPRVLAIDDGELFLVRED
GRTDVYSLDVVIREQRPKVYRF
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atggcagctcaggtctcaacatcactgcaagagttgattcgggaagattttttgacttgc
aaaatctgctatgacctatatgtagtgcctaaaattctgccatgcttgcatagctactgc
cagagatgcctagaaccacttgtggggaatgggactctgcagtgtcctgagtgccgcttg
caggcagaggtcccagctggtgttgccagcctgaagaccaacttcttcatcaatagtctc
ctggagctgttccagatgaagcacaacaaggacctagagtgcatgatctgctctaatgct
gagaggattgtggctgccacttcccggtgcctggactgcaaggatttcttgtgccaaact
tgttcctatggccactgctgttcccgtcttactctgcaccataaggtggtgaacctagaa
gagtttcttgctgggcactatgacacagaagccagattcttgcaggaactgtgctgccaa
gatcacccacaggaagccctccgtttcttctgtgactcctgtagtgtgtccatctgtaga
gattgtcgcatgttggaccattttgagcacaaagtagtctccatggccagtgcagcgcag
cgggaacggccctctgtggagcagctaatcaaaagcctggaggcaactataacctgcatc
actgaacaagagaaagctgcagaagaggtgatggagaaactaaaagcagaggcagaatgg
atcaaggagaaaatctgcaagtatgtggaagataccactgcatacatctttgcccagaag
gagagtgccttggcaaaactgaatggcttcctcactgatcaattggaggagttttgtctg
tcacaaaaggagctgcagtctcagaaagacaaagcagtgagcacccaggaattttctcag
cgtatcctttctgtagggaaggactacgagatcctccacctgaaagggatgatcaggaac
agggctgaggagcttcagaaaatcaggctccagcagttcccaagcaaggccccagagcta
gtcattgcctgggatgagagccagcagctctctgaagcaccacttttcagcttggtgatc
cctggggagcaacccaaaagagacatgcagcatttggagccagattcttttgaccaagag
agtgatgagattacagactctgactcttctgaagacctttgcataggtatgtccaactcg
cctacaaaaagctcctcttcctatcctgtgtggagggtcaaagtagattattctcacagc
ttagaacgggatttattctgcacgcccaatatcactgggattgcttttgtgcctgacact
agccatattcttcttttggataaggcaaatgatgtgataaaaaagtatagccctgaaggt
cagttccagcaggtgcttcctttgcctgcttctgactctgacttcagtggtatttctgtg
tgtggagaaatcctggcctgttcctcagagacttatctctttttcttgactcttgatggt
cagtttctacgtaaattgcaaatgaggggatcggagtcctcctaccccctcacctcctac
cgggactcttacgtggctgttagtgagggtactctctgttccatctctttgtacaaccct
tctgggctttgtgttggcagaattcagccagccaactatcaaggagggaagttcctgttc
attgctgtaaacagctgtgaggagtttgttgtctcagacttcctcaagaaacagatagtc
atcctggagaaatctggactggttctcggattgctgggatcttcaacctcactgctcacg
aagccattcagtgtctgtgtagatggaaagaggaacattttcgtggttgatcagttcaaa
gtgatacatttctcacccaatagtgagattggggaggtgatactgaatgaccagtgtcag
gtaggaagacccagagtccttgccattgatgatggtgagctttttttagtgagggaagat
ggaagaacagatgtctattctttagatgtagttattcgtgaacagaggcctaaagtatac
cggttctga
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