Hemicordylus capensis (graceful crag lizard): 128324687
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Entry
128324687 CDS
T08891
Name
(RefSeq) FRAS1-related extracellular matrix protein 1-like isoform X1
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Pathway
hcg04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
128324687
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
hcg04091
]
128324687
Lectins [BR:
hcg04091
]
C-Type lectins
Lecticans
128324687
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Cadherin_4
Lectin_C
Calx-beta
Motif
Other DBs
NCBI-GeneID:
128324687
NCBI-ProteinID:
XP_053105509
LinkDB
All DBs
Position
4:complement(100466140..100661963)
Genome browser
AA seq
2163 aa
AA seq
DB search
METVKAFLALTVLLLLGILEPLIVAKLVLVNKGISVERGRVAYVTENELQFNISKEKDSC
KVEVVLNEPVTQRVGKFIPQVFDCRFLPNEVKYIHNGCLLLKEDSVMLRVYRFTELKTIV
EKFILHIEIRSPKASLIQFGQIPLEVPDFFGVSQPIDKNVMTFKYGGLGKACTVRIMSSE
LHFPAVGQLVAEDLKIQKSDELSDNPVHTALKKAGQSQPPCTRNAACLSGLKEIQLLKMS
CEDFLVMGLRYQHLSPPSPDTDYIAIQVEIREKKSRLQLQTENIWIPVRIKGAIPNRQPQ
AAFMSMFILEIDEFILTPLTTVILDAEDEETQRERLVFNITKPPLQGFVTHLEDHSKAIT
SFTWQDLYDTKVAFQPPNISHSERQNYEVEFQAIDSFFMNSSPIMVHFSIRSAETNAPRV
AWNMGLYLLEGQSHPITWETLQIVDNDNLDAVQLLVVEGLNHGWLTIHGNKGFKFGVTDL
KDGVVLYHHDDTDTIKDHIVFRISDGRHSARHKFPINILPKDDSPPFLVSNLVFEVEEGG
KILIETHMLMAADFDSSDDYIFYKISKPPCVGELIKQPFLDGSGFPVFSFFQRDIFHGLI
YYRHFGGEIFQDSFEFTLADSQEPPNISELQIVFIHIMPVKDHLPEEVPGTLRHLVVKET
EIAHITKDHLHFTDIESPDNQLMYTITKPCFFPASLGLCDAGKLIFTDSMKSYVKNSTMP
LLSSFTQHAVTHLKVAYMPPLMEIGPDPLFIQFEFSVSDQQGGMMTGLLFNITVMPVDDE
APEIFTNHLKTKEGISSFITGEHLIVTDLDTKNSDIRIQLKKSPSHGHIELHGLLMLEGE
KFTLEDLHSYNVRYQHDSSETLEDRVTFSATDGLNTADGMLRVQIIPVNDEPPELQPGLK
SSLECLEGNQVIITAEYLYATDADSDDSRLTYMIARAPTQGVIQKDGFVVEMFSQHDIIQ
GSISYVHTGGEIGDKYFTDTITLIISDGEAGIIDGCCNEKNLPPPVPLHPNLPVYDLNIT
VLPVNNQWPVVQTGEVFVVEEGSTARITLQYLDASDEDSKPEELTFFVETNPQYGYLENI
LPTPGYEKSNAGLNISLFTFRSLQSGYINYVQSKHEHSEPTSDLFMISVSDGLHKSMATS
FYIIIDPVNDELPVLQLRNITIREGDIRAMGPDTIKVEDDDVPQDALIVYIVTPPHHGMI
LKEISGRDTEHYKQLSPIVLHRDLEVHSFTLEELNQGLMLMYMHDDTESLEDSFTIQLTD
GKHTVQGTLYIYITPVNDEIPHLSRNTGLEVEVAASKVISSVSLEVEDKDSSRNQLHYII
NNKPKCGHLKLKTTSAWSTLHPGMNFTQDDVDMNRLWYFHTSILVPESHDSFRFYVTDGQ
HSLPPESFYIFIQSVDKGDIVLFTKPVTLTEGDRVTLTTDVLMATDGTGKPEKLLYAISV
PPVHGQIEYINYPGMPISRYSQLDVVAQKVCYIHDNSHEASKDSFSFTVSNGHVEKKSLL
ELNIEHIDRIPPTLLNNKGLHVVEGSKGFLTPDFLQLTDVDSPVKNLTYVITQHPQYGHL
YMKETVMHWGQFTQLDVDSMKVYYKHNGGAGQIDTFSFIATDKVNHGFLVNGQLRKDPVE
FTIQVEFQDKAAPKLFLKASPTTIQNLKDGRFAIPITVRNLKVTDADSREEDIIFSVQRH
PFFGYLENTKAGNFLQNSFTQDDLNQHHIRYIINPFMEITSDSFEFQVSDTAGNTIAPEI
LEIKWSRIELAETCYRVCESVGSLPIKLLRTGQSAEPSFVGIKVQEVSARIDLDFKHSSA
RLVQFDPGVSVKIWNVLLQDDGLEENNEVFKIILNKPKNAVLGHKREVTVEILDPRTGGC
DSFATIQPRDTQEVLERTSKISENPLYAGHSLMASGRGNILHEEHLVNKDHHHHHHHDSP
SRGDVPQAEHMLDDEDVDFQVLADPKPEKKHQAAQHSPLFQGNTSTGAEGQFDLPSDIGT
AAQEPLSVLPFRQQSQYYFPQRDLGMKSEPISLHTSTKQRTKPRKCPFGWTLRDKHCYML
SSIRNSTWENAERACRKWSNGHLASVHSPREMAWLWKFANKQPFWIGLKEENKEDSWVWS
NDRPMTFHNFKEGKARLRKNTERRCAFVQMQKTWTARPCGQRQKGRYICSIPSLTKTEIT
TMI
NT seq
6492 nt
NT seq
+upstream
nt +downstream
nt
atggaaactgtgaaagctttcctagcattgactgttcttcttctcctggggattcttgaa
cctctaatagtagccaagcttgtccttgtgaataaaggcatcagcgttgaaagaggacga
gttgcatatgtgacagaaaatgagctacagttcaatatttctaaagagaaagactcctgc
aaggtagaggtggttttaaatgagcctgtgacacaaagagttggaaaatttatccctcag
gtatttgattgtcgtttcttacccaacgaagtaaaatacattcataatggctgcctgctg
ctaaaagaagacagcgtgatgttgagagtatataggtttacggaactgaagaccattgtg
gaaaaatttattcttcatatagaaataagaagcccaaaagcaagtctcattcagtttgga
caaatacctctagaagttccagatttctttggggtttctcagccaattgacaaaaacgtt
atgactttcaaatatggcggacttggtaaagcttgcacagttaggatcatgtcatctgaa
ttacattttcctgctgttggccaactagttgctgaggatcttaaaatacagaaaagtgat
gaattatcagataatccagttcacactgcattgaaaaaagctgggcaatcccaaccacct
tgtaccaggaatgcggcatgcctttcagggttgaaggaaatacaacttctaaagatgagc
tgtgaagactttctagtgatgggacttaggtaccagcatctcagcccaccatcacctgat
acagattatatcgcaatccaagtagaaatcagagagaaaaagagcagattacaattacag
acagaaaatatatggatccctgtgaggataaaaggggctattccaaacagacaaccacaa
gctgcattcatgtccatgttcatcttggagatagatgagttcattcttacgcctcttacc
acagtgattttagatgctgaagatgaagaaacccaaagagaaagattggtattcaacatt
actaaacctcctctccagggatttgttactcacttggaagaccactccaaggctattaca
tctttcacttggcaggatttgtatgatacaaaagttgccttccagccaccaaatatttct
cattctgagagacagaactatgaggttgagtttcaagcaattgatagcttcttcatgaac
agttctcctatcatggtccatttttctatacgaagtgcagaaacaaatgctcctcgagtt
gcatggaacatggggctttacttgttggaaggacagtcacatccaattacctgggagact
cttcagattgtagacaatgataaccttgatgctgttcagctgcttgttgtggaaggcttg
aatcatggttggctcacaatccatgggaacaaaggcttcaagtttggtgttacagatctc
aaggatggcgttgtcctctatcatcatgatgatactgacacaattaaggaccacatcgtc
ttcaggatctctgatggacggcacagtgctagacataaattcccgattaacattcttcct
aaagatgacagcccaccattcctagtgagcaatcttgtctttgaggtggaagaaggaggg
aaaatcctcattgaaactcatatgcttatggcagctgattttgactcaagtgatgattat
atcttctacaaaatatccaaaccaccctgtgtgggagaacttattaaacaacccttcctg
gatggctcaggtttccctgtgttcagcttcttccaaagagatatcttccatggtctcatc
tattatcgacattttggaggagaaattttccaagactcttttgagtttaccttagcagac
agtcaggaaccacctaatatttcagaacttcagattgtgtttattcacattatgccagtg
aaagatcatttgccagaagaagtccctggaactctaaggcaccttgttgtcaaagaaacg
gagattgcacacatcacaaaggaccacctccattttacagacattgaatcgccagacaac
cagcttatgtatacaattacaaagccttgtttcttccctgcttctcttgggctttgtgat
gcaggaaagctaattttcacagacagcatgaaaagttatgtgaaaaactctactatgcct
ttattatcatctttcacacagcatgccgtaacacatctgaaagtggcatacatgcccccg
ttgatggaaataggccctgacccgttgtttatacagtttgaattctctgtcagtgaccag
cagggaggaatgatgactggtcttcttttcaatatcacagtgatgccggtggatgatgaa
gcacctgagattttcaccaatcatctaaaaacaaaagaaggtatcagttcattcatcact
ggagagcacctaatagtaacagacttggacacaaagaacagtgatatcagaattcagttg
aagaaatcaccttctcatggacacattgaactacatggccttcttatgctagaaggggag
aaatttaccctagaggatttacactcttacaatgttaggtatcagcatgacagttctgaa
acccttgaagacagagtcacattttctgcaacagatggattgaacactgcagatggaatg
ctaagagtacagatcataccagttaatgatgagccaccagagctgcagcctggattaaaa
tcaagtctggagtgtctagaaggaaatcaagtaatcatcactgccgaatacctctatgca
acagatgctgacagtgatgactccagactcacttacatgattgccagggctcccacacag
ggagtgattcaaaaggatggctttgtggtggagatgttttctcaacatgatattattcaa
ggatccatttcctatgtacacactggaggtgaaataggagataagtacttcacggacact
ataaccctcataatctccgatggagaggctggaataatagatggctgttgcaatgagaaa
aatctcccaccacctgtgccacttcaccccaacttaccagtgtatgatttgaacatcaca
gtgctgcctgttaacaatcagtggccagtggtgcaaactggagaagtgtttgtggtggaa
gaggggtctacagcacgtattactttacaatatctggatgcttcagatgaagactcaaag
ccagaggagctaactttctttgtggagacaaatcctcaatatggttacctggaaaacatc
cttcctacacctggatatgagaaaagcaatgctgggcttaatataagtttattcactttt
cggagtctccagtctggttatatcaactatgtgcagtccaaacatgagcattcagaaccc
acttctgatctcttcatgatatcggtcagcgatggccttcacaagtctatggcaacatct
ttctacatcatcattgatccagttaatgatgaattaccagtgctgcaacttaggaacata
acaataagagaaggtgacattagggcaatgggccctgacaccattaaagttgaagatgat
gacgtcccacaagatgccctgatagtctacattgtaactccacctcatcatgggatgata
ctaaaagagatttctggcagagacactgagcattacaagcagttaagcccaattgtgctt
catcgagacttagaagttcacagctttacactggaagaacttaatcaaggactgatgctt
atgtacatgcatgatgacacagaaagcctagaggatagtttcaccattcagctgacagat
ggcaagcacacagtccaagggacactttacatctacatcacgccagtcaacgatgaaatc
cctcatctttccaggaacacaggtttagaagttgaagttgctgcaagtaaagttatttcc
agtgtgtcattagaagtggaggacaaagattcttcaaggaatcagctccattatatcatc
aacaacaagccaaaatgtggacacctaaaattaaagactacatcagcttggagcacactg
catcctggaatgaatttcactcaagatgatgtggacatgaaccgcctctggtatttccat
actagcatcctggttccagaaagccacgacagctttcgattttatgtgacagatggacag
cacagcttaccaccagaaagcttctatatctttattcaaagtgtggacaaaggtgacatt
gttctattcaccaaacctgtaactttaacagagggtgacagggtgaccttgacgacagat
gttcttatggcaacagatggcactggcaaacccgagaagctgctgtatgccatttctgtg
ccacctgtgcatggtcagattgagtacatcaattatcccggcatgcccatttcccgctac
agccagttggatgtcgtggcccagaaggtttgctacattcatgacaatagccacgaggct
agtaaggattcattcagctttactgtcagcaatggtcatgtggagaaaaaaagtctgcta
gaactgaacattgagcacattgaccgcattcctcccacgttacttaacaacaaaggtctc
catgttgtggagggtagtaaaggattcttaactccagattttcttcagcttacggatgta
gatagtccagtaaaaaacctcacctatgtaattacccagcatccacaatatggacatttg
tacatgaaagagactgtcatgcactggggccagtttacgcagctggatgtggacagtatg
aaggtgtactacaaacacaatggtggagctggacaaattgatacattctcatttatagct
acagacaaagtcaatcatggatttttggttaatgggcaattgagaaaggaccctgtggaa
tttacaatacaggtagaatttcaagataaagcagctccaaaactctttctaaaggcaagt
ccaaccaccatacaaaacctcaaagatgggaggtttgcaatccctattacagtccgcaac
ctaaaagtcacagatgctgatagcagagaagaggatatcatcttcagtgttcagcggcac
cctttctttgggtatctggaaaacacaaaagcaggtaatttcctacaaaactcttttact
caagatgacttaaaccaacatcacattcggtacatcataaaccccttcatggaaataact
tcagatagctttgaatttcaggtctcagatacagcaggcaacacaatagctccagaaatt
cttgaaataaaatggtcacgtatagaactggcggaaacatgctaccgtgtctgtgaaagc
gttgggtctcttcccattaaacttctgagaacaggacagagtgccgaaccatcatttgtt
ggaataaaagtccaagaagtatcagctagaattgacttggacttcaaacacagctccgca
cgattagtacagtttgatcctggtgtatctgtaaagatctggaatgtcctccttcaggat
gatggtcttgaagaaaacaatgaagtgtttaaaataatactgaacaaacctaaaaatgct
gtactgggacacaagagggaagtgactgttgaaattctagatccaaggactggtggctgt
gattcttttgcaaccatccaacctcgagatactcaggaagtgttggagaggactagcaaa
atttcagaaaacccattgtatgctggtcattcacttatggcaagtggaagaggaaatatc
cttcatgaagagcatctggtcaataaggatcatcatcatcatcatcatcatgactctcca
tccaggggagatgttcctcaggcagaacacatgcttgatgatgaagacgtggatttccaa
gttcttgctgatccaaaacccgagaaaaagcaccaagcagctcaacacagcccattgttc
caaggaaatacttcaacaggagctgaagggcaatttgatctaccatctgacattgggaca
gctgctcaggagcctttgtctgttttaccttttcgccaacaaagccaatattactttcct
cagagagatttgggcatgaagagtgaacctatctcattacatacaagcacaaagcagagg
actaaacccaggaagtgcccttttggttggacactccgagacaagcattgctacatgttg
agttcaattagaaattcaacttgggaaaacgctgaaagagcctgcagaaaatggtccaat
gggcatctagccagtgtgcattctccaagagagatggcgtggctctggaaatttgccaat
aagcagccattctggattggactaaaagaagaaaataaagaggacagttgggtgtggagt
aatgaccgaccaatgaccttccataacttcaaagaaggaaaagcaagactgcgcaagaac
actgaacggagatgtgcttttgtacaaatgcagaagacatggaccgcaagaccatgtgga
caaaggcagaaaggaagatatatttgttccattccttcactaactaaaactgaaattaca
acaatgatttaa
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integrated database retrieval system
