Hemicordylus capensis (graceful crag lizard): 128325055
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Entry
128325055 CDS
T08891
Symbol
DDX20
Name
(RefSeq) probable ATP-dependent RNA helicase DDX20
KO
K13131
ATP-dependent RNA helicase DDX20 [EC:
5.6.2.7
]
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hcg03041
]
128325055 (DDX20)
Enzymes [BR:
hcg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
128325055 (DDX20)
Spliceosome [BR:
hcg03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
128325055 (DDX20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
SiaC
AAA_22
AAA_19
CMS1
Motif
Other DBs
NCBI-GeneID:
128325055
NCBI-ProteinID:
XP_053106409
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Position
4:complement(60489409..60499847)
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AA seq
772 aa
AA seq
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MAAPDVAAAVAPAQSESWLRTRDVLMPEGPEDFGSLLLSTPVLEGLKAAGFLRPSPVQLK
AIPLGRCGLDLIVQAKSGTGKTCVFSTIALDSLILESPVTQILVLAPTREIAVQIHAVIT
TIGSKMEGLECHVFIGGTPLNQDKIRLKKCHVAVGSPGRIKQLIELDYLNTASIRLFILD
EADKLLEEGSFQEQINWIYSSLPANKQMLAVSATYPESLANSLSRYMRDPTFVRLNPTDP
SLIGLKQYIKVVNSHPLPHKTFEEKAENLQELFSKIPFNQALVFSNLHSRAQHLADLLTS
KGFPAECISGNMNQSQRLDAMAKLKQFHCRVLISTDLMSRGIDAEKVNLVINLDVPLDWE
TYMHRIGRAGRFGTLGLAVTYCCRGEEENLMMKITQKCNLRLLPLPEPIPPGLMEQFEGW
DVEVTAVPYPNASQHAPLFPAGRPEETVQHGALSSSVQISPVAPAAAKPKQDVKHKKPLK
SKMEHTKAKATSRNPQSTHSTAEQKCQKESDLQAAEQHNKQEMDRETLQSMLPKIPCLSS
FKNQQSTSTWTMAEFIEDYEYFIKEGLERDVEIVRSYTGPGEQHQHPENDALDRTKIESS
AHTAEWTGESDSDSSSCSSGASTSSVEDRSCIKASSDTQQRVNAVLSADQTPAQQFSGVP
ERQQFREIPQLPKKMKWNVKQNKQNRPFHYPHTAKPSKREAIEDAFQDDYAASLPCENQS
YAEYWKAYYRAWQDHYAAASHSYYQTYQRRLNSLPAYHANAVYFEELLRGGR
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atggcggctcccgatgtagcggcggcagtagcgcctgctcaatctgaaagttggctccgt
acccgggatgtgctgatgccggaggggcccgaagactttgggtccttgcttctgtccacc
ccggtgctggaagggctgaaggctgctggcttcctaagaccttccccggtgcagctcaag
gctataccattggggcgctgtggcctcgatctcattgtgcaagcaaaatctggaactggt
aaaacctgtgtcttctccactattgctcttgattccctaattctggaaagcccagttaca
cagattctggttttggctcctacccgagagattgctgtacagattcatgcagttattaca
actattggaagcaaaatggaaggcttggaatgtcatgtcttcataggagggactccttta
aaccaagataaaatcagactgaagaagtgtcacgtagcagttggctcccctggtcgcata
aagcaactcatagagttggactatctgaatacagccagcattcgcctctttattcttgat
gaagcagacaagcttctagaagaaggcagtttccaggaacaaatcaattggatttattct
tctctaccagccaacaagcagatgttggctgtttcagccacatatcctgaatccttggct
aatagtttgagtagatacatgagagatcctaccttcgtgaggctaaatcccactgatccc
agtctcattgggttgaagcagtacatcaaagttgtgaattctcacccattacctcataag
acttttgaggagaaggctgaaaacttacaggagctcttcagcaagattccgttcaaccag
gctttggtcttctcaaatctacatagtcgagctcaacatctggcagacctactaacatcc
aaaggctttcctgctgaatgcatttcaggcaatatgaatcagagccagcgactagatgcc
atggctaaactcaagcagttccattgcagagtcttgatatcaactgatttgatgtctcgt
ggaattgatgctgagaaggtgaatctagtcattaaccttgatgtgcctttggactgggaa
acatacatgcatcggattggcagagcagggcgctttggaactttaggactagctgtgaca
tactgctgccgtggagaggaggagaacctgatgatgaaaatcacgcagaaatgtaacctt
cgacttcttcctttaccagaacctatacctcctgggttaatggaacagtttgaaggatgg
gatgtagaagtcactgctgtcccatatcccaatgcttcacaacatgctcctctgttccct
gctggaagaccagaggagacagtgcagcatggagcattaagttccagtgtgcagatttct
cctgttgctcctgctgcagccaagccaaaacaggatgtcaaacacaagaagccactcaag
agcaaaatggagcataccaaagcaaaggcaacatctaggaatccacagtctactcacagt
actgcagagcagaagtgccaaaaggaatctgacctccaagctgctgagcagcacaataag
caggaaatggacagggaaactttgcaaagtatgctccccaagatcccttgcctgtcatct
tttaagaaccagcagtccaccagtacatggaccatggctgaatttattgaggattatgag
tacttcattaaggaaggattagagagagatgtggaaattgtaagaagctatacaggtcct
ggagagcagcatcaacacccagaaaatgatgctttagataggacaaaaatagaatctagt
gcacacacagctgaatggactggagagtctgatagcgacagtagctcttgcagttctggg
gcatccacttctagtgtggaggatcggtcatgtatcaaagcctcttcagatacacagcaa
agagtcaatgctgtgttgtcagcagatcagactcctgctcagcaattcagtggcgtccct
gaaagacagcagttccgagaaattcctcagctcccaaagaaaatgaaatggaatgtgaaa
cagaacaaacagaataggccattccactaccctcatactgccaagccctccaagagagag
gctatagaagatgcgttccaggacgattatgctgcttcccttccttgtgaaaatcagagc
tatgcagaatactggaaagcatattaccgggcctggcaggaccattatgcggcagcttct
cattcatactaccaaacgtatcagagacgattgaacagtctgcctgcatatcatgccaat
gcagtctattttgaagaattgctgaggggtggtcggtga
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