Hemicordylus capensis (graceful crag lizard): 128325172
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Entry
128325172 CDS
T08891
Symbol
SOX18
Name
(RefSeq) transcription factor SOX-18
KO
K09270
transcription factor SOX7/8/10/18 (SOX group E/F)
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hcg03000
]
128325172 (SOX18)
Transcription factors [BR:
hcg03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
128325172 (SOX18)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
Sox17_18_mid
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
128325172
NCBI-ProteinID:
XP_053106655
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All DBs
Position
4:complement(8958213..8971514)
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AA seq
459 aa
AA seq
DB search
MNISEPSFCREELSQPRGDFSWGAAAAAPPPAPPPAAAAAAAASDPGRAYPQQTPAPQPA
SSRTPSPDAGFGFRPGAPAAAAAAAAGGDPGGALLGPVSSRSPSPDAGYGHSSGRSDGKG
GGGGSGEDSRIRRPMNAFMVWAKDERKRLAQQNPDLHNAVLSKMLGQSWKALSATDKRPF
VEEAERLRIQHLQDHPNYKYRPRRKKQAKKIKRMEPSILLHNLSQPCNDSFGMSHRSAGA
LGHPGHSQPPPLNHFRELRSVGSELENYGLPTPEMSPLDVLEQTEPAFFPPHMQDDCNVM
AFRAYHHHHHHHPAPPPQMEFPPEKNLGRNMPMGYPPNPPHLADAMRTPHPPGMYYNQIC
AGASNGISAHLGQLSPPPESHHLDGVEHLNPSELWTEVDRNEFDQYLNMSRTRPDPSGLL
YHVSMSKVTPQSLSCEESSLISALSDASSAVYYSTCITG
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgaatatatctgagcctagtttctgtagagaggagttatcccaacccagaggcgacttt
tcatggggagcggcagcggcagcgcccccaccagcaccgccacccgcagcagcagcagca
gcagccgcctctgatccggggcgcgcctacccgcagcagaccccggcgccacagccagca
tccagccggacccccagcccggacgcgggctttggatttcgcccaggcgcaccggcggcg
gcggcggcggcagcggcggggggagaccccggcggagcgctcttgggacccgtgtccagc
cgttctcccagcccggacgccggctatggccacagctccggccgatctgacggcaaaggc
ggcggcggcggcagcggggaagactcccgcatccgacgccccatgaacgccttcatggtg
tgggccaaggacgagaggaagcggctggcccagcagaatccggatctgcacaacgcggtg
ctgagcaagatgctgggtcagtcatggaaggccctcagtgccaccgacaagcgtcccttc
gtggaagaggcggaaaggctgaggatccagcacctgcaggaccaccccaactacaagtac
cgccccaggaggaagaagcaagccaagaagatcaagaggatggagcccagcatcctcctc
cacaacctctcccagccctgcaacgatagctttgggatgagccaccgctccgccggcgcc
ctcggccacccgggccactcccagcctcccccgctcaaccactttagagaactccgttcg
gtgggctctgagctggagaactatggcctgccgacccctgagatgtctcctttggatgtc
ttggaacagaccgagccggcctttttccctccccacatgcaggacgactgcaacgtgatg
gccttccgggcctatcatcaccaccaccaccaccaccccgctccgcctccccagatggag
ttcccccctgaaaaaaacctggggcggaacatgccgatgggctacccacccaacccacca
cacctggcggatgccatgaggactccccacccacctggtatgtactacaaccagatttgt
gctggagcctccaatgggatttcggcccacctgggccagctctccccgcctcccgagtcg
caccacctggacggcgtcgagcacttgaatcccagtgagctttggacagaagtggaccgc
aacgagttcgaccagtatttgaatatgagcaggactcgtcccgatccctcgggactcctc
taccatgtttccatgtccaaagtgactcctcagagcctctcctgcgaggagagcagcttg
atatcagccttgtctgatgccagcagtgctgtgtactatagcacctgtatcactgggtag
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