KEGG   Hemicordylus capensis (graceful crag lizard): 128325238
Entry
128325238         CDS       T08891                                 
Symbol
RAE1
Name
(RefSeq) mRNA export factor RAE1 isoform X1
  KO
K14298  mRNA export factor
Organism
hcg  Hemicordylus capensis (graceful crag lizard)
Pathway
hcg03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:hcg00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    128325238 (RAE1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hcg03019]
    128325238 (RAE1)
   03036 Chromosome and associated proteins [BR:hcg03036]
    128325238 (RAE1)
Messenger RNA biogenesis [BR:hcg03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     128325238 (RAE1)
Chromosome and associated proteins [BR:hcg03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    128325238 (RAE1)
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 WD40 Beta-prop_EML_2 Beta-prop_WDR3_1st WDR55 WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_WDR3_2nd WD40_Gbeta Beta-prop_TEP1_2nd Beta-prop_RIG_2nd Beta-prop_EML Beta-prop_Aladin Beta-prop_WDR36-Utp21_1st Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 WD40_RFWD3 Beta-prop_IFT140_1st eIF2A WD40_MABP1-WDR62_1st Beta-prop_ACSF4 Beta-prop_WDR41 WD40_MABP1-WDR62_2nd NBCH_WD40 PepSY
Other DBs
NCBI-GeneID: 128325238
NCBI-ProteinID: XP_053106792
LinkDB
Position
4:complement(21931678..21969205)
AA seq 369 aa
MSLFGSTSGFGTGGTSMFGSATTDNHNPMKDIEVTSPPDDSIGCLAFSPPTLPGNFLIAG
SWANDVRCWEVQDNGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKIAKMWDLNSNQA
IQIAQHEAPVKTVHWIKAPNYSCVMTGSWDKTLKFWDTRSPTPMMTLQLPERCYCADVVY
PMAVVATAERGLIVYQLENQPCEFRRIESPLKHQHRCVAIFKDKVNKPTGFALGSIEGRV
AIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPAHGTLATVGSDGRFSFW
DKDARTKLKTSEQLDQPISACSFNHNGNIFAYASSYDWSKGHEFYNPQKKNYIFLRNAAE
ELKPRNKKY
NT seq 1110 nt   +upstreamnt  +downstreamnt
atgagtttgtttgggtcaacctcagggtttggaacaggaggaaccagcatgtttggcagc
gcaactacagataaccacaacccaatgaaggatattgaagttacttcaccacctgatgac
agcattggttgtctggctttcagcccaccaacattgccgggtaatttccttattgcagga
tcatgggcaaatgatgttcgttgttgggaagtccaggataatggacagactattccaaaa
gcacagcagatgcatacaggacctgtgttagatgtttgttggagtgatgatggaagtaaa
gtgtttacagcctcttgtgataaaattgcaaaaatgtgggaccttaacagcaaccaggca
atacaaattgcacagcatgaagctccagttaagactgtccattggattaaagcaccgaat
tatagctgtgtgatgacagggagctgggataaaactttgaagttctgggatacacgttca
ccaactccaatgatgacactacagttgcctgagcgatgttactgtgctgatgtggtatac
cccatggctgttgttgctactgcagagaggggattgatagtttatcagttagagaatcag
ccatgtgaatttaggagaatagaatctccacttaaacatcagcatcgctgtgtggctatt
tttaaagacaaagtgaacaaaccaacagggtttgcccttggaagcatcgaaggaagagta
gccattcattacattaacccaccaaatcctgccaaagataacttcaccttcaaatgtcat
cgttccaatggcacaaacacatctgcacctcaggatatctatgctgtaaatggaattgcc
tttcatcctgcccacggtactcttgcaaccgtaggatctgatggtagattcagcttttgg
gataaagatgcacggacaaagctaaaaacatcagagcagctggaccagccaatatctgct
tgcagtttcaaccataatggcaacatatttgcatatgcttccagttatgactggtcaaag
gggcatgagttctataacccacaaaagaaaaactatatctttctgcgcaatgctgcggaa
gagttaaaacccagaaataagaagtattaa

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