Hemicordylus capensis (graceful crag lizard): 128325275
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Entry
128325275 CDS
T08891
Symbol
TAF4
Name
(RefSeq) transcription initiation factor TFIID subunit 4 isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Pathway
hcg03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
128325275 (TAF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hcg03021
]
128325275 (TAF4)
03036 Chromosome and associated proteins [BR:
hcg03036
]
128325275 (TAF4)
Transcription machinery [BR:
hcg03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
128325275 (TAF4)
Coactivators
SAGA/TFTC/STAGA complex
128325275 (TAF4)
Chromosome and associated proteins [BR:
hcg03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
128325275 (TAF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
tRNA-synt_1c
Motif
Other DBs
NCBI-GeneID:
128325275
NCBI-ProteinID:
XP_053106862
LinkDB
All DBs
Position
4:15287229..15410642
Genome browser
AA seq
1118 aa
AA seq
DB search
MAAGSDLLDEVFLNSEVDEKVVSDLVGSLESQLAASGHHHQHHKAQEPLRAAGGLLGNHV
VSSSSSSSSPSPSPGGVVVGGSANVQTESPGSGTTGSSSSGGGGGTTTTGTAKMGLSGPE
ITKPGAGGVQGSVINHNARSQGSTLDGTTTTSTAAAVQGGSETAVAPGTLSQGKSVVIST
MATALSTRNGKIGTTAVQTLNGSNVVMNSHHSGSTSFSATPVTANPAVNPAITPLVNNGP
GNVGKVNAVLPSASNTVIQASFLGTGVSSDSSPSPTVISQQPPSIGTGGPTVALVRPPIH
TAGPSVAAATQNGSNTVINSTISVGSFPATAVAAATVGSGVSLQSSLVNSQPGSGVPTAP
TTQVIKSESPKTIVQAVTQQQTLAAGGQPSTTGGNMIIGQTMQAGLPNVAPNPGGVPPVP
PGTPTGLAKGSASTVAQSLPRTPATTGGIRATLTPTVLAPRLPQPPQNPTNIQNFQLPPG
MVLVRSENGQLLMIPQHALAQMQAQAHAQSQPQTTMTPRPATPTSASPVQISTVQVSSLR
NAPGTPIIARQVAPTTIIKQVSQAQTTVQPTTTLQRPPVVQPQIVLGSPAQTTALGTATA
VQTGTPQRTVQGATATSTAATETMENVKKCKNFLSTLIKLASSGKQSTETAANVKELVQN
LLDGKIEAEDFTGRLYRELNSSPQPYLVPFLKRSLPALRQLTPDSAAFIQQSQHQQPLTQ
PTTALTAVMLSGSVQRTAGKTTATVTSTLQQPVISLSQPTQVGVGKQGQPTQVVIQQSQK
PGTLIRPPPQVTLTQTPMVALRPPHSRIMLTAPPQIQLNPLQAVPVVKQTVLPGTKALSA
LSTQAAAAQKNKLKEPGGGSFRDDDDINDVASMAGVNLSEESARILATNSELVGTLTRSC
KDETFLLPAPLQRRILEIGKKHGITEIHPDVVSYVSHVTQQRLQNLVEKVSETAQQKNMS
YKDDERYEQASDVRAQLKFFEQLDQIEKQRKDEQEREILMRAAKSRSRQEDPEQLRLKQK
AKEMQQQELAQMRQRDANLTALAAIGPRKKRKVDSPGAGSGTEGSSTNVAVPGSSVVGTT
RQFTRQRITRVNLRDLIFCLENERETSHSLLLYKAFLK
NT seq
3357 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggctcggatctgctggatgaggttttcctgaacagtgaggtggatgagaag
gtggtgagcgacctggtgggctccctggagtcccagctggcggcctcaggccaccatcac
cagcaccacaaggcgcaggagcccctcagggccgctggggggctgctggggaaccatgtt
gtgagcagcagcagcagcagcagcagcccaagccctagccctggaggagtagtagtagga
ggcagtgctaatgtccaaacagaaagccccggcagcggcaccaccggcagcagcagcagc
ggcggcggcggcggcaccaccaccaccggcaccgccaagatgggactcagtggccccgag
atcaccaagccaggagctggtggtgtgcaagggagtgttattaatcacaacgccaggtcc
cagggttccactctagatgggactaccacaaccagcactgctgcagcagtccaaggtgga
tctgaaactgctgttgccccagggaccctcagccagggcaaatcagtggtcatcagcacc
atggcaacagctttgtctacgaggaatggtaaaattgggaccacagcggtgcagactttg
aatgggagtaacgtggtgatgaattctcaccattcgggaagcacgtctttctcagccaca
cctgtaacagctaaccctgctgtcaaccctgccatcacccctcttgttaacaatggacct
ggaaacgtggggaaagtcaatgctgttttgccgtctgcttcgaatactgtcatccaggcg
tctttccttggcactggggtatcctctgactcttcaccttcaccaacggtgatctcacaa
cagcccccaagcattgggactggggggccaactgtagcattggtgaggccccccattcac
acggcaggaccttcagtggctgcagccactcagaatgggagcaatactgtgatcaattcg
accatcagtgtggggagttttcctgccacagctgttgctgcagccaccgtggggtctgga
gtttccctccagtcctctcttgtgaacagccagcctggttctggtgtgccaactgcaccc
accacacaggtcatcaaatcggagtctcctaaaacaatcgtgcaggcagtaacccaacag
cagactctggctgctggtggccagcctagtactacagggggtaatatgatcattgggcaa
actatgcaagctggcctacccaacgtggcccctaatcctggtggggtacctcctgtgcct
ccaggtacccccacaggcctggctaagggttctgccagtacagtggctcaaagcttgcca
aggactccagcaactacaggtggaatcagagcaactttgactcccactgttttagcacct
cgtctgcctcagcctcctcagaatccaacaaatattcagaactttcagttgccaccaggc
atggtccttgtgcgtagtgagaatggccagttattgatgatccctcaacacgctttggcg
cagatgcaggcccaagcgcatgcgcagtcccagcctcagaccaccatgactcctcgccct
gccacacctaccagtgcttctccggtccagatctcgactgtgcaggtcagttcactgaga
aacgctcctggaacgcctataattgcacggcaggtggcaccgaccactataatcaagcaa
gtgtctcaggcacagacaactgtacagcctacaacgacgctacagaggccgcctgtagtt
cagcctcagattgttcttggcagtcccgcacaaacgacggcattgggaacagcaactgct
gtgcagactggaactccacagcggacggtgcagggagccacagcaacctcaactgcagcc
acagaaaccatggaaaatgttaagaaatgcaagaattttctctctacactaataaaactg
gcctcttctggaaaacagtcgacagagactgcagctaatgtgaaagaactagtccagaac
ctgctggatggaaaaattgaagcagaagacttcaccggcaggctgtaccgggaacttaat
tcttcacctcaaccctaccttgtgcctttcttgaagcggagcttacctgccctgagacag
ctgactccagattcagcggctttcattcagcaaagccaacatcagcagcccttaacgcag
cccacgaccgcgcttacagccgtgatgttgagtggctctgtccagcgcacagcggggaag
accactgccaccgtaacgagtaccttgcagcagccagtcatcagcctgtcgcagccaacg
caagttggggttggcaaacaagggcagcccacgcaggtggttatccagcagtctcaaaag
ccaggcacgttgattaggcctcctccgcaggtgacattgacacagacccctatggtagcc
ttgaggccaccccacagtcgtattatgcttaccgctcctccacaaattcagctgaatcca
cttcaggcagtccctgtggtaaaacagacagtattacctggaaccaaagctctttccgct
ctttcaactcaagcagcagctgctcagaaaaacaaactcaaagaacctgggggaggttct
tttagggatgatgatgatattaacgatgttgcatcgatggcgggtgttaacctatcagaa
gagagtgcgcgtatcttggccacaaattctgagttggtgggcacgttaacgaggtcgtgt
aaagatgaaaccttccttctcccggcacccttgcaaagaaggatattagaaataggtaaa
aagcatggaataacagaaatccatcctgatgtagttagctacgtatcgcatgtaacacag
cagaggttacaaaacctagtggaaaaggtatcggagactgctcagcaaaagaatatgtct
tacaaggatgatgaaagatacgagcaagcaagtgatgttcgggcgcagctcaagttcttt
gagcaacttgatcaaatagaaaaacagcggaaagatgaacaagaaagggaaattttaatg
cgtgcggcaaagtctcgatctcgacaagaagatccggagcagcttcggttgaaacaaaag
gctaaggagatgcagcaacaagaactagcacaaatgagacagagggatgccaacttaacg
gctttggctgcaatagggcccagaaagaagaggaaagtggactctccaggcgctggatca
gggacagagggatccagtacgaacgtggcagttccaggcagctccgtagtcggaacaacc
aggcagtttacacggcaaaggataacgcgggtgaacctcagggacctcatattttgttta
gaaaatgagcgagagacaagccattcactattgctatacaaagcattcctgaagtaa
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