Hemicordylus capensis (graceful crag lizard): 128325370
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Entry
128325370 CDS
T08891
Symbol
TRIM54
Name
(RefSeq) tripartite motif-containing protein 54
KO
K10653
tripartite motif-containing protein 54
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Pathway
hcg04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
128325370 (TRIM54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hcg04121
]
128325370 (TRIM54)
Ubiquitin system [BR:
hcg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
128325370 (TRIM54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4_2
RING_XB3-XBAT31
zf-C3HC4
zf-B_box
zf-RING_5
zf-RING_2
zf-C3HC4_3
zf-C3HC4_4
zf-RING_6
Sina_RING
DUF5799
Prok-RING_4
RHH_9
CagA
Zn_ribbon_FGT1_2
CYP38_PsbQ-like
SpoIISA_toxin
DUF4363
Motif
Other DBs
NCBI-GeneID:
128325370
NCBI-ProteinID:
XP_053107063
LinkDB
All DBs
Position
1:complement(458414460..458445184)
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AA seq
378 aa
AA seq
DB search
MNFAVGFKPMLGTSQSMDNLEKQLICPICLEMFTKPVVILPCQHNLCRKCANDIFQASNP
LWQSRGSTSVSSGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESSRPLHAKA
EQQLMCEEHEEEKINIYCLSCETPTCSMCKVFGAHKDCEVAPLANVYKRQKGELSDGIAM
LVAGNDRIQAIISQMEEICKTIEENGRRQKQHLCLRFDSLYSILEERKKELLQEVGREQE
EKVQRVRGLIRQYGDHLEVSSKLVESAIQSMEEPQMAVYLQQAKELIKKITDMSKVSMSS
RPEPGYENMDRFSINVEHVAEMLRTIEFQTDHAGEDAEPEGGDAAREEDPPEGLAEAPEG
PENVGLRPKPASASHGPH
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgaactttgctgtgggcttcaagccgatgctggggacctcgcagagcatggacaatctg
gagaagcagctcatctgccccatctgcctggagatgttcaccaagccggtggtcatcctg
ccctgtcagcacaacctctgccgcaagtgcgccaacgacattttccaggcctccaaccct
ctctggcaatcacgagggtccacttccgtgtcatctggaggacggttccggtgcccatcc
tgccgccacgaagtagtgctggaccgacacggagtgtacggcttgcagcgcaacctcctg
gtagaaaacatcatcgacatttacaagcaggagtcctctcgccccctccacgccaaggcg
gagcagcagctgatgtgcgaggagcacgaggaggagaagatcaacatctactgcctgagc
tgcgagacccccacctgctccatgtgcaaggtcttcggggcccacaaggactgcgaggtg
gcccctctggccaacgtctacaagcgccagaagggggagctgagtgacgggatcgccatg
ctggtggcgggcaacgaccggatccaggccatcatcagccagatggaggagatctgcaag
accattgaggagaacgggcggcggcagaagcagcacctctgcctgcgcttcgactccttg
tacagcatcctggaggagcgcaagaaggagctgctgcaggaggtcggccgcgagcaggag
gagaaggtgcagcgcgtgcgcgggctcatccgccagtacggggaccacctggaggtctcc
tccaagctggtcgagtcggccatccagtccatggaggagccccagatggccgtctaccta
cagcaagccaaggagctgattaagaagatcacagacatgtccaaggtttccatgagcagc
cgcccggagccgggctatgaaaacatggaccgcttctccatcaacgtggaacacgtggct
gaaatgctgagaaccattgaattccagacagatcatgctggggaggatgcggagcccgag
ggaggtgatgctgcaagagaggaagacccgcctgaggggctggcggaagcccccgagggg
ccggaaaatgtggggctcaggcccaaaccagcaagtgcatctcatggtccgcactga
DBGET
integrated database retrieval system
