Hemicordylus capensis (graceful crag lizard): 128325675
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Entry
128325675 CDS
T08891
Symbol
PCDH18
Name
(RefSeq) protocadherin-18
KO
K16499
protocadherin delta 2
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hcg04515
]
128325675 (PCDH18)
Cell adhesion molecules [BR:
hcg04515
]
Cadherins
Protocadherins
128325675 (PCDH18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_3
Syndecan
PepSY
Motif
Other DBs
NCBI-GeneID:
128325675
NCBI-ProteinID:
XP_053107297
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Position
5:complement(56074459..56085156)
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AA seq
1135 aa
AA seq
DB search
MPRLGTKMHFMFAFALAATMSCWRGVAGKNLKYRIYEEQRVGSVIARLSEDVADVLYRMP
NPSSVRFRAMQRGNSPLLVVREDNGEISIGAKIDREQLCQKNLNCSIEFDVITLPTEHLQ
LFHVEVEVLDINDNSPQFSRALIPIEISESAAVGTRIPLDSAFDPDVGENSLYTYSLSAN
DFFTIEVRTRTDGAKYAELIVVSELDRELKSSYELQLTASDNGVPQRSGSSILKISISDS
NDNSPVFEQQTYIIQLLENSRVGTLLIDLNATDPDEGANGKVVYSFSSHVSSKIIETFKM
DSERGQLTLLKPVDYETTKSYEIDAQAQDLGPNSIPAHCKIIIKIVDVNDNKPEINLNLM
SPGKEEIAYISEKASIETFVALVRVQDKDSGVNGEVVCKLHGHGHFKLQKTYENNYFILT
NTTLDREKRSEYSLTVIAEDRGTPSLSTVKHFTVQIIDENDNPPQFQTNRYEIVILENNS
PGAYITSVTATDPDLGDNGQVTYTILESFILGSSITTYVTIDPSNGAIYALRTFDHEEVN
QIAFVVQARDGGSQQLASNTTVVLTIIDENDNAPVIVGPVLHNNTAEISIPKEAESNYHV
TRIRAIDRDSGMNSELSCSLVSSSEENLFIMDPHTCDISLNTSIESAKSTEWELSVVVQD
KGSPPLSTKALVKCSVFKYVYLPLTTHATYINNHQPLDVSMITIISLGAICAVLLVIMVI
FATRCNREKKDTRSYNCRVAESTYQHHPKRPSRQIHKGDITLVPTVNGTLPIRSHHKASP
SSSPTLERGQMSSRQSHHSHQSLNSLVTISSNHVPENFSLELTHATPAVEVSQLLSMLHQ
GQYQPRPSFRGNKYSRSYRYALQDMDKFSLKDSGRGDSEAGDSDYDLGRDSPIDRLLGEG
FSDLFLTDGRIPAAMRLCTEECRVLGHSDQCWMPPLPSPSSDYRSNMFIPGEEFQPQQNQ
PQQQQVLEDDPQAVESSEKKKSFSTFGKESQNEEEAGDMCTSSLLSEMNSVFQRLLPPSL
DAYSECSEMDPPSSLERRKGHLPAKTVSYPQGVAAWAASTHFQNPVNNTGLTLGAHSGAQ
PSSKWLPAMEEIPENYEEDDFDNVLNHLSDGKHELMDASELVAEINKLLQDVRQN
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atgccaaggctgggtactaagatgcactttatgttcgcgtttgcactggcggcgaccatg
tcttgctggagaggcgtagcgggcaagaatctgaaatacaggatttatgaggagcagagg
gtgggctcggtcattgcaaggctctctgaagacgtggctgacgttttgtacagaatgccg
aacccttcctcggtccgtttccgagccatgcagagggggaattcgcccttgcttgtggtc
cgcgaggataacggggagatcagcatcggagcgaagattgaccgggagcaactctgccag
aaaaacttaaactgctcgatcgagttcgatgtgatcaccctgcctaccgagcatctgcag
cttttccatgtcgaagtggaagtgctggatattaatgacaactcccctcagttctcccga
gccctgatccccattgagatctcggagagtgccgctgtgggcacccgcattcctttggac
agtgcttttgatccagatgtgggggagaattccctgtacacgtattcactgtctgccaac
gatttcttcaccattgaagttagaacaaggacagatggggcgaagtatgcagagctgatt
gtggtgagcgagttggaccgggagctgaaatcgagctatgagctccaactcactgcctcg
gacaatggggtgcctcagcggagtggatcttccatcctcaaaatcagcatttctgattca
aatgacaatagtccggtttttgagcagcagacgtatattattcagcttttagaaaattcc
cgggttgggactttgctcattgatctcaacgcaacggatccagacgagggggctaatggg
aaagttgtctactcttttagtagtcacgtgtcttccaaaattatcgagacttttaaaatg
gactctgaaagggggcagctgacccttctcaaaccagtggactatgaaaccaccaaatcc
tatgaaatcgatgctcaagcccaggatctgggtccaaattctatcccagctcattgcaaa
attattattaaaattgttgatgtaaatgacaacaagcctgaaatcaatttaaacctaatg
tctcctgggaaggaggaaattgcttatatttctgaaaaggcttccatagagacttttgtt
gcccttgttagggtgcaagacaaagactctggagttaatggagaggtggtgtgcaaactt
catggacatggtcactttaaacttcaaaagacctatgaaaacaactatttcatcttaaca
aataccaccctagatcgagaaaagcgatctgaatacagcttaactgtgatagcagaagac
aggggaactccaagcctctccacagttaaacacttcactgtgcagatcattgacgaaaat
gacaacccaccacagttccagaccaacagatatgaaattgtaattttggaaaataactct
ccaggtgcatatatcacctctgtcacagcaacagatccagatctaggagataatgggcag
gtgacctacactatcttggaaagctttattttgggaagctccataaccacctatgtgacc
attgatccttccaatggcgcaatctatgcacttaggacctttgaccatgaagaagtaaac
caaattgcctttgtggttcaagctagagatggaggcagtcaacagcttgccagcaataca
acagttgtgctaactatcattgatgaaaatgacaatgcccctgtgattgtgggaccagta
ctgcacaacaatacagcagagatctccatccctaaagaagctgaaagtaactaccatgtt
actaggataagagccatagatagagactcaggtatgaactcagagctaagttgctcctta
gtaagtagtagtgaagagaaccttttcataatggacccccacacatgtgacatctctctc
aacactagcattgaatctgctaagtcaacagaatgggaactttctgtggttgttcaggac
aaagggagtccaccactcagtaccaaagcacttgtgaaatgcagtgtttttaaatatgtt
tatctacctttaactacacatgccacttatattaataaccaccaaccattagatgtttcc
atgatcacaataatctccttaggagcaatatgtgcagtgttgctagtaatcatggtaatc
tttgctacaaggtgcaatcgtgaaaaaaaggacaccaggtcctataattgtcgggttgca
gaatctacctaccagcatcatcccaaaaggccatcaagacagattcacaaaggagacatt
acactcgtgcctactgttaatgggactttgccaatcagatctcaccacaaagcttcacct
tcatcatctccaacactagaaagaggacaaatgagcagccgacaaagccatcacagccac
cagtctttaaacagtctggtgaccatctcctcaaatcacgtgccggagaatttctccctt
gagctcactcatgctactcctgctgttgaggtctctcaacttctctcgatgcttcatcaa
ggccagtatcagccaaggccaagttttcgaggaaacaaatattccaggagctacaggtat
gcccttcaagatatggataagttcagcttgaaagacagcggccgtggtgacagtgaagca
ggagacagtgattatgatttggggagagattctccaattgacagacttcttggagaagga
ttcagtgaccttttccttacagatgggagaattcctgcagcaatgaggctgtgcacagag
gaatgcagggtccttggacactctgaccagtgctggatgccacctctgccttctccatct
tctgattatagaagtaatatgtttattcctggagaagaatttcagcctcagcaaaaccaa
ccacagcaacagcaggtgttggaagatgatccgcaggctgttgaatcttctgaaaagaaa
aagagcttttcaacctttggcaaagagagtcagaacgaggaggaagcaggtgatatgtgt
acttcatctctgctctctgaaatgaacagcgttttccagcgcctcttgcctccttcctta
gatgcctactcagaatgcagtgaaatggatccccccagctcacttgagcgcaggaaagga
catttgcctgccaagaccgtgagctatccacaaggggtagcagcgtgggcagccagtaca
catttccaaaaccctgtgaacaacacagggcttactttgggtgctcactcaggtgcccag
ccatcttcaaaatggctgcccgccatggaagaaatcccagagaattatgaagaagatgac
tttgacaatgtgcttaaccacctcagtgacggtaaacatgaactaatggatgctagtgag
ctggtggcggaaattaacaagttgctacaagatgtccggcagaactag
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