Hemicordylus capensis (graceful crag lizard): 128325951
Help
Entry
128325951 CDS
T08891
Symbol
SOX6
Name
(RefSeq) transcription factor SOX-6 isoform X1
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hcg03000
]
128325951 (SOX6)
Transcription factors [BR:
hcg03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
128325951 (SOX6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
SgrT
Motif
Other DBs
NCBI-GeneID:
128325951
NCBI-ProteinID:
XP_053107883
LinkDB
All DBs
Position
1:complement(122758893..123435616)
Genome browser
AA seq
786 aa
AA seq
DB search
MSSKQATSPFAADGEETTTQDLASQEQEEGSNEELVAPHLPLHTILHNKPHSEELPTLVT
TIQQDADWNSVISTQHRMESESNKLCSLYSFRNTSTSPHKPEEGGRDRSELMTSVNFGTP
ERRKGSLADVVDTLKQKKLEEMTRTEQEDSSCMEKLLSKDWKEKMERLNTSELLGEIKGT
PESLAEKERQLSTMITQLISLREQLLAAHDEQKKLAASQIEKQRQQMDLARQQQEQIARQ
QQQLLQQQHKINLLQQQIQQVQGHMPPLMIPIFPHDQRTLAAAAAAQQGFLFPPGITYKP
GDNYPVQFIPSTMAAAAASGLSPLQLQQLYAAQLASMQVSPGAKMPSTPQPPNTTGALSP
TGMKNEKRGTSPITHVKDDAVQPLNLSARPKTAEPVKSPTSPTQSLFPISKTSPVNVANK
SGIPSPIGATLGRGSSLDILSSLNSPALFGDQDTVMKAIQEARKMREQIQREQQQQPHCI
DGKLSSMNNMGLNNCRAEKERTRFENLGPQLSGKPSEDGKLGPGVIDLTRPEDAEGSKAM
NGSAAKLQQYYCWPTGGATVAEARVYRDARGRSSSEPHIKRPMNAFMVWAKDERRKILQA
FPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSKIHLEKYPNYKYKPRPKRTCIVDG
KKLRIGEYKQLMRSRRQEMRQFFTVGQQPQIPITTGTGVVYPGAITMATTTPSPQMTSDC
SSTSASPEPSIPVIQSTYGMKSDSGSLAGNEMINGEDEMEMYEDFEDDPKSDYSSENEAH
EAVTAN
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccaagcaggccacctctccatttgcagctgatggagaggaaacaaccacccag
gacttagcatcacaggaacaggaagaaggcagcaatgaagagcttgtggctccccatctg
cctctgcataccatattgcacaacaaacctcattccgaggagctaccaactctagtcact
acaattcaacaagacgctgactggaacagtgttatctcaacccagcatagaatggagtca
gaaagtaataagttatgttccttatattccttccgaaatacttctacctcaccacataaa
cccgaagaaggaggtcgtgaccgcagtgagctaatgaccagtgttaatttcggaactcca
gaacgccgcaaaggaagccttgccgatgtggtggacacactgaaacagaagaaactagag
gagatgaccagaactgagcaggaggattcatcttgcatggaaaagctactgtctaaagac
tggaaggagaaaatggaaagattaaacacaagtgaactccttggagaaattaaaggtaca
cctgaaagcctagcagaaaaagagcgacagctttctaccatgatcacccagctcatcagt
ttacgggagcagcttctggctgcccatgatgagcagaaaaagctggcagcatcacaaatt
gaaaaacaacggcagcaaatggaccttgctcgccaacaacaagaacagattgcaagacaa
cagcagcaacttctgcaacagcagcacaaaatcaatctactgcagcagcaaattcagcag
gttcagggtcacatgcctccgctcatgatcccaatttttccacacgaccagcggacattg
gcagcggctgctgcagcccagcagggtttccttttccccccaggaataacttacaagcca
ggtgataactatcctgtgcagttcattccgtcaacaatggcagctgctgctgcttctgga
ctcagccctttacagctccagcaactctatgcagctcagctggccagcatgcaggtttca
cctggagccaagatgccctccacccctcaaccgccaaacacaacaggggcactctcaccc
actgggatgaagaatgaaaagagagggaccagtcctataactcatgttaaggatgatgcc
gtacagccactgaatctctcagcccgaccgaagacggctgaacctgtcaaatccccgacg
tcgccaacgcagagcctcttccctattagtaaaaccagcccggtgaatgtggccaataaa
agtggaatccccagccctataggtgcaactctgggtagaggatcttctctagacatcctt
tccagtcttaattcacctgccctatttggggaccaggacacagtaatgaaagccattcag
gaggctcgaaagatgagagaacagatccagagggagcagcagcaacaaccacattgtatt
gatggaaaactttcctccatgaataacatgggtctcaacaactgtagggctgaaaaggaa
agaacacgttttgagaatttaggcccacagctatcagggaagcccagtgaagatggaaaa
ctgggcccaggagtcattgatcttacaaggccagaagatgcagagggaagtaaagcaatg
aatggctctgcagctaaactacagcagtattattgttggccaacaggaggcgccactgtg
gctgaagcgcgagtctacagggatgcccgcggtcgaagtagcagtgagccacatatcaaa
cgaccaatgaatgctttcatggtttgggcaaaggatgaacgcagaaaaattcttcaagct
ttccctgacatgcacaactccaatattagcaaaatccttggctctcgctggaaatccatg
tctaaccaagagaaacaaccttactatgaagagcaagcacggctaagtaaaatccaccta
gagaagtaccctaattacaaatataaacctcgaccaaaacgcacctgcattgtcgatggc
aagaaattacgtattggagaatataaacagctgatgaggtctcgaagacaggagatgagg
caattttttacagtagggcaacagcctcagattccaatcaccacaggaacaggtgtggtc
tatcctggtgctattactatggcaactactacgccatctcctcagatgacatctgattgc
tccagcacctctgctagccctgagcccagtatccctgtcattcagagcacttatggcatg
aagtcggacagcgggagccttgctggaaatgaaatgataaatggggaggatgaaatggaa
atgtacgaggacttcgaagatgaccccaaatcagactatagcagtgaaaatgaagcccat
gaggctgtcactgccaactga
DBGET
integrated database retrieval system
