Hemicordylus capensis (graceful crag lizard): 128326153
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Entry
128326153 CDS
T08891
Symbol
CFAP54
Name
(RefSeq) cilia- and flagella-associated protein 54 isoform X1
KO
K25553
cilia- and flagella-associated protein 54
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
hcg03037
]
128326153 (CFAP54)
Cilium and associated proteins [BR:
hcg03037
]
Motile cilia and associated proteins
Sperm associated proteins
128326153 (CFAP54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CFAP54_N
Motif
Other DBs
NCBI-GeneID:
128326153
NCBI-ProteinID:
XP_053108412
LinkDB
All DBs
Position
5:206223827..206488650
Genome browser
AA seq
3192 aa
AA seq
DB search
MSAVPPPRAQTPSLPPPPLAIFYGPLEPGNPVIENFERDLHDCLSFLRRKREAAGGAGAR
QQELHRRGATNLFNIWNNYKTRFPDWYYNEKLVKIGDQLTEMKEYKLALVQCYGRYLQQI
STVNIDQLELDVCQFQSHFFPNGFRDKTASCTFHVLQARNNCLYKMVCDADVDLLNQESL
NTCFRILSTLQLIMQMILPHENLCWLVYNGTIHMYTICRHLMTVGQSAKVHEYLLWACVC
MESSVPLLAIHYLTWRTTLYAAVCQCYYDCQAGMYGEIFARRGLIKIDELKQMENISSSP
LSLETKKKFKEATVKMAAMIFKRSAFEPRRRPKGIFRPRPKANLREIQNTPWPRTVSERL
LMEIFDCNSSQFFAILEALFDKNRRTLIPAPPVPDEVEIRDVVSELFFAGMDILDGGGSN
VQGNMPTESSVIITASTTLMQHILAGRNLISGEAALRFLKMAFSYEEWDTFDHVTGLFFT
FLQSQKNPVWKKAEAELKILLVMQPLVSSRKPRHSLYVQGNNIREAPSARFPGKKSIAFQ
GGSAKTRKMTDELFLLAITLYSCVCTSDEVLPDREMVIDATMFLWQRCKVGIQRIQMSGT
NFLKHSLKYQTFKWINILYIVNEVIHTINLGDTNAVVMAEVVLRLTAVMENIVEFTVKSR
NIPERIDTAATSEFFIDDMPSLIQKCPLEQLHLAYQYLDRAISAINRAHRITLLPDGTSV
LDNCCKKHLNTNEKFIIGNNFIMDLNLELIQTQHRVAVKLLKLSQGTQTDEKNTKSKSSV
KDASQPKYLTEPDIMKKIKKNKLSKALYFMHKATLMFCVGLSNTSANQLLEEAFTLIQKA
EAEQNALCATLQQPASSVKSKVPPPPILLSRSHCSMAFKPAPFAPPVKVSWYSIFGCVAE
GSNPKVRLNHYNLENTAEMTPADENCVLEVKGLETNQSYIFAVAAYASDGKLIGNSIGEM
TKPILAYPPLSAVTVRAYLIQSAFQTENYTLCKKAFQPLWDYFVSVPHTPVADVTVVSTS
THVTLHKSRLIPDAVSQASPNLLYLFIRSIFIINDITVTDGALFCDSVCFNELKYSRQVA
RLNECGRMLVAVELSNWLNDVHYSLQSVVNCYGLIAPLIYHKIASEPVIQIIIKCLSVIQ
EIPCSTLQRKSAACYDSIQHMIACSCFFSVKVLRTWKEYELAIVIINYGKKLLDSSQVAV
GERGDEMLDDEISTKRHKSLAAAEKVNENLEALENNLLRLTKPGQELTGEEDALLLFPVV
TNWQTRNAFREVLKFKKSPRFLEYFVKLLAKALSEEKFSRILDWTDEIQDYLKKRNRFLI
GIKRIVKKKPKADQKKHGAEFHNVKGSVVGKKKWKTFKKDQHKFLPKHPCLGKSFDLQRK
EREELRKIACLILIQKLNTTTSVFIKRRRFRQLMVEEMPWKSQLNIYLAITYFNLFKKRI
EELYNIDDNSLQSWQSYNEMDPEIFSLNNSGTIIVRPTVEEEMKTKPTVFTRTPSGRIKR
KKDALDPSSPAFDSGSSLPASDPTLQSASSDTDSSSSLLDHSNCLTPETDTMVDPTDPAQ
LSSSVSASVADEISEHSSKLNERDMARPHGTSEKGGSTTVKERERALCYSAILEHFPKIF
LHFKRAVVFAHRGGHWTLLQNACRDLWNYTQEIQMIMKHSESFCVSFAITRELFLNTIWQ
PYCLASDMLLDMIVDLQASNSVKIIEAEGDFCVPSCVGDIAHEEGGSNLSFEYPFDDINV
VDLQGVRNLILRTVEILFHLKKWESLVYIAMQFNTITHERYAEQVTPLLVFAQRQLQERI
QLSDASSFQPLFKELVTATGDKVCCRDFVAKKLHAAAKCNERTNELHFYNSDARSQVYVP
LDTTDTLKCFRESLEKSKHHSRALKYSRKLLSLFLAHTQEHSGKLNRTVTFQFGSRPKVG
FSMGTELTYQPEPPDLSEENFTSLSMVESSSISQSKLSVIISSYERTLEALQTYNQQGLK
VQAFHELGNLHFYTENKRDAFKCWCQGLDAALNIADALHHWQELDDLSENAIGNLANRSQ
DYCDKFISRAGIWGCLQGAVLAAKISQYILLYDVKLRTKTCILSAVLFKSLFRASLPHPT
ADCDFVQYETDTLIPGIDIFLDRYRADVGTVVASLSFLIYELHCCKQNLIILPLFTLYQY
FVSEVCRDAIKSIEGRILKIKVLSELGFFSDAFQELCTINRGEKIPWKLTSVYRIIQKLP
VSAKFDSSQPLLTNVNLQALEDVFNRSLHPIWISVCEPRIVNNLMLAKMHFIISLAATLN
CVPEKVMKTTYCLNSDILRKSGKNAEAYLKGFLPGTSNASGKRDPSVMIVELEKLKDSLN
MPTLKGILLAEAEERINSILENLQNKYGTLINECTAAELETVIEAKLQLVVIAQQRLQTA
FSAALAFSAVKLLQDADVFKKKCNLSPDAEQIDKASEEGSYIEDSHLLHNTIAREHLNIH
LWLRCRLALVKAITAQARGIETMQENELSECSYVIREVQMEAEAFNDVETLAEITMQAVK
LGLQGRQPVADIKFLLQNTIRFLEEKTLISPPACLTLVQSMLLLADILRTEAEDDSEHHT
SKTDQWNLLILAHKLVIKQLFILGQSLEQHAGDPTVTTLTESLQNIYLPQIKLLAKVKMR
LGHALALELSCTSKTQNEVKWQLALQHTETALDLCTASVKRELDLEAEILFRKGKIERQL
DMICGNKSMSAVESLLNGIKLSLRSYQNYGLIRRAYLEMALQYFYLITHKDESLSSGTLK
GQAFKPRSARRRVSSEEITVLEMYRVQAWIAVRAAAQVGDAVLAFHQLTGRKAVKLYHMK
HGILPHIPEFALLDLTSSYKDFLSDGYNVIYKVPMMSPEHDDRSESGRAESASSEESQDK
QKIPWSHVIRYNTYLTTLLNMSPLLAVPKAGAGLFAREDMLFTSVFDTSTTLRLAALHSF
LKAYLPIYSDCCLHQPPKELYGFEKPCYSMTVLGKSTPETLGAAKRLSSERISPGVAWSS
DTDIRSENSATSIPFKELCVQWYLPSLEQSAKGGDNMVLFIYAYNTKAVKITNIKSFQSA
RIYCGYLWIPLERVLAVRATLSELQHQTEMLMQSVLPALIQSDIQRNLPIASSSSNPEKV
PIDEKTKEMARQCFSEIKALLSVGAMHSSPLTEIPFDITLPSIKNLRRLFDPANGCVITS
GSVFNWIVSLLT
NT seq
9579 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcagtccccccaccccgagcccagaccccgtctctgcctcccccgccgctcgcc
attttctatgggcccctggagccggggaaccccgtgatagaaaacttcgagagagacctg
cacgactgcctcagcttcttgcggcggaaacgggaagcggcggggggagcgggcgccagg
cagcaggagctgcaccggcgaggagcaacgaatttatttaatatttggaacaattacaaa
actcgatttccagattggtattacaatgaaaaacttgtgaaaattggtgatcaacttaca
gaaatgaaagaatataaactggcacttgtacagtgctatggacgttatcttcagcaaatc
agtactgtcaacatagaccaacttgaattagatgtgtgtcaatttcagtctcattttttc
cctaatggatttagagataaaacagcttcatgtacattccatgttttgcaagcaaggaat
aattgcctttacaaaatggtatgcgatgctgatgtagatctcctgaatcaggaatctttg
aacacatgtttcagaatcttgtccacgttgcaactgatcatgcagatgattctgccacat
gagaatttgtgttggcttgtctataatggtacaattcacatgtatacgatatgcagacat
ttgatgactgtgggtcagtctgctaaggtacatgaatatttattgtgggcctgtgtgtgc
atggaatcatcagttccacttttagccatacactatttgacatggagaaccactctttat
gctgctgtttgccagtgttattatgactgccaggctggcatgtatggagagatatttgca
cgccgtggtttgattaaaattgatgaactaaagcaaatggagaatataagttcttcacca
ctaagcttggaaacaaagaagaaattcaaagaagccactgtgaagatggcagcaatgatc
ttcaaaagatcagcatttgaacccagaagaagaccaaaagggattttccgaccaagaccg
aaagctaatttaagagaaatacaaaatacgccttggccgcgcacagtttcagaaaggctt
ctgatggagatatttgattgcaattcatctcaattttttgccatcctggaagctctgttt
gataaaaataggcgaacactgatccctgctcctcctgttcccgatgaagtggaaattcgt
gatgtggtttcagagctcttttttgcaggcatggatattcttgatggtgggggcagcaat
gtacaaggaaacatgcccacagagtcttctgttataataactgcatcaacaacacttatg
cagcatatattagcaggaaggaatcttatttctggggaagcagcactgaggtttcttaag
atggctttcagctatgaagaatgggatacatttgatcatgtaactggattgtttttcact
tttcttcagagtcaaaagaatccagtatggaagaaagcagaagccgaactcaaaatactt
ctggtaatgcagcctctagtatcctcaagaaaaccaaggcattctttgtatgttcaagga
aataatatcagggaagcacctagcgctcgttttcctggaaaaaaatccattgcatttcaa
ggaggatcagcaaaaacaagaaaaatgactgatgaactttttctgttggcaattaccctt
tattcctgcgtttgtacatctgatgaggttttgccagatagagaaatggtaatagatgca
acaatgtttttgtggcaaaggtgtaaagtcggaattcagagaatccaaatgagcggaacc
aacttcttaaagcacagtcttaaataccaaacattcaagtggattaatatactttatata
gttaatgaagtaattcacactataaatcttggagacactaatgcagtggtaatggctgaa
gttgtattacgactaactgcagtgatggagaatattgtagaattcacagtgaaatctcga
aatataccagaaagaattgacactgcagccacttcagaattctttattgatgatatgcct
tcattaatacagaaatgtcccttagaacagttacatttggcttatcagtatttggacaga
gcaattagcgcaataaaccgagctcaccgaataacccttttacctgatggaacatcagtg
cttgataactgttgcaaaaagcatttgaacaccaatgagaaatttataataggaaataac
ttcattatggatttaaatcttgaacttattcagactcagcatcgagtagctgttaaacta
cttaaattgtcacaaggcactcaaactgatgagaaaaatacaaaatctaagtcttctgtg
aaggatgcgagccagcccaaatatttaacagagccagatataatgaagaaaattaaaaag
aataaattgtccaaagctctctacttcatgcacaaggctacactgatgttttgcgtagga
ttatccaatacttctgcaaaccagctccttgaggaagcatttactctaattcagaaggca
gaagctgaacaaaatgcactatgtgccactttgcaacaacctgcaagtagtgtgaaaagc
aaagttccgcctcctcctattttgctttccaggtcacattgctccatggcatttaagcca
gctccatttgcgccacctgtgaaggtttcatggtatagtatttttggatgtgtggcagaa
ggaagcaatccaaaagtcaggttaaatcattacaatcttgagaacacagcagaaatgaca
ccagctgatgaaaattgtgtcttagaagtaaaaggtttagagaccaatcaaagttacata
tttgcagttgcggcatatgcttcagatggaaagcttattggtaacagcattggggaaatg
actaaaccaattcttgcatacccacctctctcagctgttactgtccgggcatatctgatt
cagagtgcttttcagactgagaattataccctatgcaaaaaggcatttcaaccactctgg
gactattttgtctcagttcctcatactcctgttgcggatgtcacagttgtttctacaagc
acccatgtaactttacataagagcagattaattcctgatgctgtgtctcaggcatctcca
aacctcttatacctgttcatcaggagcatttttattatcaatgacatcactgtgacagat
ggagctctcttctgtgattctgtttgcttcaatgagctaaaatacagtagacaagttgct
agattaaatgaatgtgggagaatgctggtggcagttgaactcagtaactggttaaatgat
gtgcactattccctgcagtcagttgttaattgttatggtcttatagctcccctgatctat
cacaaaattgcttcggagccagtaattcagattatcattaaatgtctctcagtcattcag
gaaatcccatgtagtaccttgcaaagaaaatcagcagcatgttatgatagcattcagcat
atgatcgcttgttcttgcttcttctcagtaaaggtactgcgaacatggaaagaatatgaa
ttggcaatcgttattattaactatgggaaaaagttgctggattcctcccaggtggctgta
ggagaaagaggagatgaaatgctagacgatgagatatctaccaaaagacacaagtcacta
gctgcagctgaaaaagtaaatgagaacttagaagctcttgaaaacaacctgctcagactt
acaaaaccaggacaggagcttacaggagaagaagatgctttgttgttgtttcccgtagtt
acaaactggcaaacacggaatgcttttagagaagtactgaaatttaagaagagccctcgc
ttccttgaatattttgttaaacttctggctaaagcactatctgaagagaaattttcacga
attttagactggacagatgaaatacaagattaccttaaaaaacgaaatagattccttatt
gggatcaagcgaattgtgaaaaaaaaaccaaaagcagatcaaaagaagcatggagcagag
ttccacaatgtgaaagggtctgtagtaggcaagaaaaaatggaagacttttaaaaaagat
caacataaatttctccccaaacatccatgtctgggtaaatcatttgatcttcaaaggaaa
gaaagagaggaattgcgaaaaatagcttgtctaattcttatacagaagctgaatacaact
actagtgtgttcataaaacgaagaaggttccgtcagttaatggttgaagagatgccatgg
aaatctcagctgaacatatacctggcaattacctacttcaatttgtttaaaaaacggata
gaagagctctataatattgatgataattctttacaaagttggcagagttacaatgaaatg
gatcctgaaatattttcattaaacaattcaggcaccataatagtgagaccaactgtagag
gaagaaatgaagactaaacctacagtttttacaagaacaccatcaggaaggattaaaaga
aaaaaggacgcacttgacccatcttcccctgccttcgactctggttcttccttgcctgct
tctgaccctacattacagagtgcttcttcggacactgattccagttcaagcctgcttgat
cacagtaattgcctcactcctgaaactgataccatggtggatcccactgatccggcccag
ctatcatcttcggtctcagcttcagttgctgatgaaatttccgagcacagttctaagttg
aatgaaagagatatggctcgacctcatggaacaagtgaaaaaggagggagtactactgtc
aaggaacgtgaacgagcattgtgttattctgctattctagagcattttcctaaaatcttt
cttcatttcaaaagagctgtggtttttgctcatcgtggtggccactggacattgcttcaa
aatgcctgccgagacctctggaactatactcaagaaatacagatgattatgaaacattca
gagtctttttgtgtatcatttgctattactagggaacttttccttaataccatttggcaa
ccatattgcctggcatcagatatgttgcttgatatgatcgttgatctccaggctagcaac
tcagttaagattattgaagctgaaggagatttctgtgttccaagttgtgtaggagacatt
gctcatgaagaaggtggttctaatctttcctttgaatatccatttgatgatattaatgtt
gttgacttgcaaggagtacgtaatttgatcctgcgaactgtagaaattctatttcatttg
aagaagtgggaatcacttgtatacatagccatgcagtttaacacaattacacatgagaga
tatgcagagcaagtgactcctctgctggtgtttgctcagagacaacttcaagaaagaata
caactcagtgatgctagtagttttcagccacttttcaaagaacttgtcactgctactgga
gataaggtgtgctgcagagactttgttgcgaaaaagctgcatgctgctgcaaaatgtaat
gaaagaactaatgagctccatttctataattcagatgcaaggtcacaggtttatgttcct
ctggatacgacagatacactgaaatgtttcagagaaagcctagaaaaatcaaaacaccac
agcagagctcttaaatatagcaggaaattgctttcattatttcttgctcacacacaagaa
cattctggaaaactaaacagaacagtaactttccagtttggttcacgtccaaaagtggga
tttagtatggggacagagttgacatatcaaccagaaccacctgatctttctgaagaaaat
tttacttccctcagtatggttgaaagcagttccatttctcagtcaaaactatcagtgatc
atctcttcatatgaaagaactcttgaagcgcttcaaacatataaccagcaaggcctcaag
gtgcaggctttccatgaacttggaaatcttcacttttatacagaaaacaaaagagatgct
ttcaaatgctggtgtcaaggccttgatgcagccctcaacatagctgatgcacttcatcac
tggcaagagttagatgacttgtcagagaatgccattggcaacttagcaaacagatctcaa
gattactgtgataaattcatttctcgggctggaatttggggttgcttacaaggagcagtc
ttagcagccaaaatttcccagtacatattgttatatgatgtgaaattaagaaccaaaacc
tgcattttatctgctgttcttttcaagtccctatttagagcttccctaccccatcctaca
gcggattgtgattttgtacaatacgaaacagataccttaattcctggaattgatatattt
ttggatcgctatagagctgatgttggaactgttgttgcaagtctgagttttcttatatat
gaattgcattgttgcaagcaaaatctaataattttgccgctgttcacattatatcaatac
tttgtttctgaagtctgtcgggatgcaattaaaagtattgaaggaaggattcttaagatt
aaagtgctttcagagttaggatttttctctgatgccttccaagaactgtgtacaattaac
cgaggagagaaaatcccctggaaattaacttcagtctacaggattattcaaaagcttccg
gtctctgcaaagtttgattcatcacaaccactcttgacaaatgtgaatctgcaggcatta
gaagatgtatttaataggtctctacatccaatctggatttcagtgtgtgagccacggatt
gtgaacaacttaatgttagccaaaatgcatttcattattagccttgctgcaacattaaat
tgtgttcctgaaaaagtgatgaaaaccacatattgtttgaacagtgatatcttacggaag
tcaggaaaaaatgcagaggcatacttaaaaggttttttaccagggacatcaaatgcaagt
ggaaagcgagacccaagtgtcatgattgtggaacttgaaaaacttaaagattcgttaaat
atgcctacactaaagggaattctattggcagaagctgaagaaaggattaattccattctt
gaaaacctacagaacaaatatggcacattgatcaatgagtgtacagctgcagaattagaa
actgtcattgaagccaagcttcagcttgtagttattgctcaacaaagacttcaaacagca
ttcagtgcagctttggccttttctgcagtaaaacttcttcaggatgcagatgtgttcaag
aagaaatgtaacttatcaccagatgcagagcaaatagataaggcaagtgaagaaggcagt
tatattgaagattctcacctgcttcacaacacaatagcacgggaacatttgaatatacat
ttgtggctgaggtgtcgtttggcattagtgaaggcaattacagcacaggcacgaggcatt
gaaacaatgcaagaaaatgaattgtcagagtgttcatatgtgatcagagaggtccaaatg
gaggctgaagcattcaatgatgttgaaacacttgctgaaattacaatgcaagctgttaag
cttggcctgcaaggaagacaaccagttgctgacattaagtttctattacagaatacaatc
aggttccttgaagaaaagacactgatttctccaccagcttgtttaacactagtgcaaagt
atgcttctgctagctgacatactgagaacagaagcagaggatgattcagagcatcacact
tctaaaacagatcaatggaatttattaattctggcacacaaacttgtcattaaacagtta
tttattctgggacaatcacttgaacaacatgcaggagacccgacagttacaactctaaca
gagtctttgcaaaacatatacttaccacaaatcaaattactggcaaaagtcaaaatgaga
ctcggacatgcattggctctagaattatcttgcacatctaaaacacaaaatgaggtgaaa
tggcaactagcgctccagcatacagaaacagcactggatctttgtacagcatcagtcaaa
agagaattggatctggaagcagaaattctgtttcggaaagggaagatagagcgacagctg
gatatgatatgtggtaataaatcgatgtcagctgttgaaagcttgctgaatggtataaag
ttaagcttgcgcagttatcaaaactatggactaataagaagagcatatctggagatggca
ttgcaatatttctatttaattacacacaaggacgaatctctgtcttcaggtacactgaaa
gggcaagcattcaaaccgaggtctgccagaagacgtgttagttctgaagaaattacagtg
ctagaaatgtacagagtgcaggcctggattgcagtaagagctgctgcacaggtcggtgat
gctgttctggctttccatcagttaactggaaggaaggctgttaaactatatcacatgaaa
catggaatactacctcatatcccagaatttgctcttctggacctcacttcttcctacaag
gattttttgtctgatggatataatgttatctacaaagttcctatgatgtctcctgaacat
gatgatagatcggaaagtggcagagccgaaagtgcttcttctgaggagagccaagacaaa
cagaagataccctggtcccatgtaattcgctacaatacttacttaacaacactcttgaac
atgagccccctgctcgctgttccaaaagcaggtgcaggcttatttgctagagaagacatg
ttgttcacttctgtatttgatacatcaactaccctacgcctagcagcattgcattctttc
ctaaaagcctatttgcctatatattccgactgttgccttcatcagcctccaaaagagcta
tatggttttgaaaagccttgctacagtatgacagttcttggaaagtcaaccccagaaaca
cttggagcagcaaaaaggctttcatcggagagaataagtcctggtgttgcttggagctcc
gatacagacattcgttcagaaaacagtgcaaccagtattcccttcaaggaactttgtgtg
cagtggtaccttccatctttggaacaatctgcaaaaggaggagataatatggttttattt
atttatgcttacaatacaaaagcagtcaaaattaccaacatcaagtctttccagtcagcc
cgtatatattgtggttatttgtggatcccactggaaagggttcttgctgtacgtgcaaca
ttgtctgaattacagcatcagactgaaatgttaatgcaatcagtgctgcctgctctgata
caaagtgatatacaaagaaatttgcctatagcaagttcctcaagtaatcctgaaaaagtg
ccaattgatgaaaaaacaaaggaaatggcaagacagtgtttttctgaaataaaagccttg
ttgtctgttggtgcaatgcattcatcaccacttacagagatcccatttgacatcacttta
ccatcaataaagaatttaaggagattatttgatccagcaaatgggtgtgtgataacttca
ggaagtgttttcaactggatcgtctctttgctcacttga
DBGET
integrated database retrieval system
