Hemicordylus capensis (graceful crag lizard): 128326316
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Entry
128326316 CDS
T08891
Symbol
CPSF2
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 2
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Pathway
hcg03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
128326316 (CPSF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hcg03019
]
128326316 (CPSF2)
Messenger RNA biogenesis [BR:
hcg03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
128326316 (CPSF2)
U7-dependent histone pre-mRNA processing factors
128326316 (CPSF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_6
CPSF100_C
Beta-Casp
RMMBL
Lactamase_B
Anti-Pycsar_Apyc1
Lactamase_B_2
Motif
Other DBs
NCBI-GeneID:
128326316
NCBI-ProteinID:
XP_053108918
LinkDB
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Position
1:complement(34424525..34460200)
Genome browser
AA seq
783 aa
AA seq
DB search
MTSIIKLTTLSGVQEESALCYLLQVDEFRFLLDCGWDENFSMDIIDSLRKHVHQVDAVLL
SHPDPLHLGALPYAVGKMGLNCAIYATIPVYKMGQMFMYDLYQSRHNTEDFTLFTLDDVD
AAFDKIQQLKFSQIVNLKGKGHGLSITPLPAGHMIGGTIWKIVKDGEEEIVYAVDFNHKR
EIHLNGCSLEMLSRPSLLITDSFNATYVQPRRKQRDEQLLTNVLETLRGDGNVLIAVDTA
GRVLELAQLLDQIWRTKDAGLGVYSLALLNNVSYNVVEFSKSQVEWMSDKLMRCFEDKRN
NPFQFRHLSLCHGLSDLARVPSPKVVLASQPDLECGFSRDLFIQWCQDPKNSIILTYRTT
PGTLTRFLIDNPSEKVIDIELRKRVKLEGKELEEYLEKEKLKKEAAKKLEQSKEADIDSS
DESDVEEDIDQPSVHKTKHDLMMKGEGNRKGSFFKQAKKSYPMFPAPEERIKWDEYGEII
KPEDFLVPELQATEEEKSKLESGLTNGDEPMDQDLADVPTKCVSATESMEIKARVTYIDY
EGRSDGDSIKKIINQMKPRQLVIVHGPPDASQDLAESCRAFGGKDIKVYMPKLHETVDAT
SETHIYQVRLKDSLVSSLQFCKAKDAELAWIDGVLDMRVSKVDTGVILEEGELRDDGEDL
EMQVDVPSSDSSVVAQQKAMKSLFGEDDKEICEESEIIPTLEPLPPNEVLGHQSVFMNEP
RLSDFKQVLLREGIQAEFVGGVLVCNNLVAVRRTETGRIGLEGCLCEDFYKIRDLLYEQY
AIV
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atgacatcaattatcaagctaaccaccctctcgggggtgcaggaagaatctgctctctgc
tatttacttcaagtagatgagtttcgttttcttttggattgtggctgggatgagaatttt
tctatggacattattgattccctaagaaaacatgttcaccaggttgatgcagttcttctt
tcacatcctgatcctttacacttgggtgcacttccatatgcagtaggaaagatgggatta
aattgtgctatttatgcaaccattcctgtatacaaaatgggccagatgttcatgtatgat
ctctaccagtctcgccataatacagaagacttcactttgtttacccttgatgatgttgat
gcagcttttgataaaatacaacaactaaaattttctcagattgtcaatctgaaagggaaa
gggcatggcttgtccattacaccactgccagcaggccatatgataggaggcacaatttgg
aagatagttaaagacggagaagaagaaattgtttatgctgttgacttcaaccacaagagg
gagatccatttgaatggatgttccctggaaatgttaagcagaccttcattgcttatcaca
gattcctttaacgctacatatgtacagccaagacggaaacaaagagatgaacaactgcta
acaaatgtcttggaaactctgagaggtgatggaaatgtcctaatagctgtggacactgca
ggcagagttttggagcttgcccaattgcttgatcaaatatggaggacaaaagatgcaggt
ttaggtgtctactcattagcacttttaaataatgtcagctacaatgttgtggagttctca
aaatctcaggtagaatggatgagtgacaagttgatgagatgctttgaagataagaggaac
aatcctttccagttccgtcatctctctctgtgccatggactttcagatttggctcgagtt
cctagtcccaaagttgtccttgctagccaaccagatctggagtgtggattttcaagagat
ctatttatacaatggtgtcaggatcccaaaaactctatcattttgacatataggaccact
cctggaacactaacacgattcctaatagataatccctctgaaaaagttatagacatagag
ctgaggaaaagggtcaaactggaaggaaaggaacttgaggaatacttggagaaggaaaag
ctaaagaaagaggcagctaaaaaactagagcagtccaaagaggcagatattgattccagt
gatgagagtgatgtcgaagaggacattgatcaaccatctgttcataaaactaaacatgac
ctgatgatgaaaggtgaaggtaaccggaaaggaagcttcttcaaacaggccaaaaagtca
taccccatgtttccagctccagaagagagaattaaatgggatgaatatggagagattatc
aaaccagaggacttccttgttccagagcttcaagcaacagaagaagaaaagagcaaactg
gaatctgggctcacaaatggagatgaacctatggaccaggatttagcagatgttcctacc
aaatgtgtttcagcaacagaatccatggaaataaaagctcgtgttacatacatagattat
gaagggcgctcagatggggactccattaaaaaaatcattaatcagatgaagccgcggcag
ttggtcattgttcatggtccgcccgatgccagtcaggatcttgcagagtcctgcagagct
tttggtggaaaggacattaaagtttacatgcccaaattgcatgaaactgtggatgcaacc
agtgagacccatatataccaggtgaggttaaaagactctctggtcagctcccttcagttt
tgtaaagcaaaagatgctgaattggcatggatagatggagtcctggacatgcgggtatca
aaagtggacacgggggtgattttggaagaaggggaactgagagatgatggagaagacctg
gaaatgcaagtggatgtgccatcttcagattctagcgttgttgcacagcaaaaggccatg
aagagcctctttggagaagatgacaaagaaatttgtgaggaaagtgagatcattcctacc
ttggaacccttgccaccaaatgaggttcttggacaccagtctgtcttcatgaatgagcca
agactgtctgactttaagcaggttctgttgcgagaaggaattcaggctgaatttgtagga
ggagtccttgtatgcaacaacttggtggctgttcgcaggacagaaactggccgtattgga
ttggaaggctgcctctgtgaagatttctataaaattagagaccttttatatgagcagtat
gctattgtctaa
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