Hemicordylus capensis (graceful crag lizard): 128326319
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Entry
128326319 CDS
T08891
Symbol
SYNPO2
Name
(RefSeq) synaptopodin-2 isoform X1
KO
K24066
synaptopodin-2
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Pathway
hcg04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
128326319 (SYNPO2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
hcg04990
]
128326319 (SYNPO2)
Domain-containing proteins not elsewhere classified [BR:
hcg04990
]
PDZ domain-containing proteins
Other PDZ domain-containing proteins
128326319 (SYNPO2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Calsarcin
Motif
Other DBs
NCBI-GeneID:
128326319
NCBI-ProteinID:
XP_053108927
LinkDB
All DBs
Position
5:43762725..43925896
Genome browser
AA seq
1025 aa
AA seq
DB search
MEGLADTLEMLIKRSSSGVNDNLSPERENGDRSNIANEEYKESTTLQIRTAQNRPYRELQ
VTGAAQEMLQREWRSDEEDLSETKQEREITHCHKIPPKVIEAPKAHLIAVPAFTRGVGER
PGPTVELQLSLSHDKHKGSSAPGLTVLGAEKCASPEAGSTLQQEGTSWVTSAPAAAEDHT
AQWSSRTFQVASGKGVGATQGAETKEPSLTKVEVILDCSDREKEASRSLAEKGCVDSQVE
GGQSEAPPSVVSFGISSEGTEQGEDDEHSEREHSRPHKHRARHARLRRSESLSEKQVKEA
KSKCKSIALLLTAAPNPNSKGVLMFKKRRQRARKYTWVSYGTGELEHYEGEEDEGEDVDK
ENAFEVTLLGTSESEIDEDFFSDIDKEDRIVTFDWDTGLLEVEKKPKSGEEMQMLPESKG
KGALMFAKRRQRVDQVTAEQEAMKTQAVHSMEEHQEATTAESSQKISSSTYQVKQEASRM
QSHVSKSYIEMSRSHGTTIQQNGIGATPETNMMYPSSEVPKSAASNRTAKPFPGVQNRAA
APFSPTRSMTSPLSDLPAPPPYTSVSPPPEALYRTALTPVASTAPPAVWSPTESTEQIAS
RDERIAVPAKRTGILQEAKRRNTAKPMFTFKEAPKVSPNPALLSLVQNTEGKKGGGAGFE
SGPEEDYLSLGAEACNFMQIQAAKQKIPPPVAPKPAVKVSPTATPVSPVWSPPAVAVTQP
PTFPAPNSPQVATPAPIKIAQPAYPSPQPPSTLNLAGPLRGPQTAVSHQNYTPKTTPTTP
LGNAVLAGGVGPAFEMPPALSGKGAQLFAKRQSRMEKYVVDSETVQANMARASSPTPSLP
ASWKYSSNVRAPPPVAYNPIQSPSYPLAATRPQSKSPGAPKTTKKKPKKALSSLEVMKHQ
PYQLNSSLFTFQPPSDKEGLIPKQPAKLDSVSASKQALPTRSLNAGSPSTVRASSVYSVP
AYSSQPFVQSNTSSPVIESCASTGYPTFLKQEPAAPSMFTTPRPKFSAKKVGVTAQVWKP
STIEE
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atggagggcctggctgacactctcgagatgctcatcaagaggtcttccagtggagtaaat
gacaacttaagtcctgaaagagaaaatggagaccgaagtaacattgcaaatgaagaatat
aaagagagcaccacgttacaaattagaacggcccagaacaggccctacagagaactgcag
gtcacaggggcagcccaggaaatgctccagagagagtggcgaagtgacgaggaggacctt
tctgagacaaagcaagaaagagagataacacactgtcacaaaatccctcccaaagtgata
gaagccccgaaagcacacttgatagcagtgccagctttcactaggggggttggagaaagg
ccaggcccgacagttgagctgcagttatccctctcacatgacaagcacaaaggcagcagt
gctccaggactgactgtcctgggggctgaaaagtgtgcctctccagaagcaggatccacc
ctacagcaagaggggactagctgggtgacttcagctcctgcagccgcagaagaccacact
gcacaatggtcaagcagaaccttccaggttgctagtgggaaaggagttggagcaacccaa
ggagctgagacaaaagagccgtctctcaccaaggtggaagtgatcctagattgctctgac
agagagaaggaagcgtccaggtctctggccgaaaaggggtgtgttgactctcaagtggaa
ggagggcagtcagaagcacctccttctgtagtctcctttggaatctcatcagaaggcaca
gagcagggagaagacgacgagcactctgaaagggaacatagcagacctcacaaacacagg
gcaaggcacgccaggctcagacggagtgagagcctgtcagagaaacaggtgaaagaagcc
aaatctaaatgtaagagcattgccctattgttgacggcagctcctaaccccaattccaag
ggggtgttgatgttcaagaagcgtcgccaaagggccaggaaatacacttgggtcagctac
ggcactggagagctagagcattacgagggcgaagaagacgagggtgaagacgttgacaag
gagaacgcttttgaggtaaccttactaggcacgagtgagtctgaaatcgatgaagatttc
ttctctgacattgacaaagaagaccggattgtgacatttgactgggataccggcctactt
gaggttgaaaagaaaccaaaaagtggagaagagatgcagatgcttccagagagcaaaggc
aagggcgcgctcatgtttgccaagaggcggcaaagagtagatcaggtcacagctgaacaa
gaggcaatgaagacgcaagcagttcacagtatggaggagcaccaagaggccactacagca
gagagcagccagaaaattagctcttccacataccaggtgaaacaagaagcttctagaatg
cagagccatgtaagcaaaagctacatagaaatgagccgcagtcatggcacaacaatacag
caaaatggcattggggccactcctgagacaaacatgatgtatccatcctctgaagtgcct
aaatcagcggcttcaaacagaacagccaagcctttccctggtgtgcagaacagggcagca
gcacctttttcacccaccagaagcatgactagccctctctcggatttacctgcaccacct
ccctacacttcagtcagcccaccaccagaagccttgtacagaactgctttgactccagtg
gccagcacagctcctccagctgtgtggtctccgaccgaatccacagagcagattgcatcc
agggacgaaaggattgcagtgcctgccaaaagaactggaattttgcaagaggcaaagcga
agaaacactgcaaagccgatgtttactttcaaagaagcccctaaggtgagtcccaatcct
gctcttttgtcccttgtgcagaacacggaaggtaaaaaaggtggtggtgctggctttgag
tcaggtcctgaagaagactacctcagcttgggagcagaggcctgcaatttcatgcaaatc
caagcagccaagcaaaagatccctcctcctgttgctccaaaacccgcagtaaaggtttct
cctactgccacaccagtttcaccagtctggtcacctccggctgtagctgttacccagcct
cccacctttccagctccaaattcaccccaagtggcaactccagcacctataaagatagca
caacctgcttatccttctccacagcccccaagtactcttaatctagctggtccccttaga
gggcctcaaacagcagtgtcacaccaaaattatacaccaaaaacaacacctaccacacca
ctaggaaatgctgtgcttgctggaggggtggggccagcctttgagatgcccccagctttg
agtgggaagggagcccagctctttgcgaaaaggcaatcgcgaatggaaaaatatgtggta
gactcagaaaccgtgcaagccaatatggcacgggcttcatcaccaactccatctttacca
gcctcttggaaatattcatctaatgttcgagcaccacctccagtagcttataaccccatc
cagtccccatcttatcctcttgctgccaccagaccacagtcaaagtcgcctggagctccc
aaaactaccaagaaaaaacctaagaaagcacttagttctttagaggttatgaagcatcaa
ccataccagcttaattcatccttatttacttttcaacctccctctgacaaggaaggccta
attcctaagcaacccgcaaagcttgactcagtgtctgcctcaaaacaagctctaccaacg
agatcactcaatgctggttctccttctactgtccgagcatcttcagtgtactctgtaccg
gcctacagttcacagccttttgtccagtcaaacacctctagcccagtaattgaatcctgt
gcatctacaggctatcctacatttttgaagcaagaaccagcagcaccttctatgtttact
actccaaggccaaaattttcagcaaagaaagtcggtgtcacagcacaggtgtggaagccc
tccaccattgaagagtaa
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