Hemicordylus capensis (graceful crag lizard): 128326322
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Entry
128326322 CDS
T08891
Symbol
LAMB1
Name
(RefSeq) laminin subunit beta-1 isoform X1
KO
K05636
laminin, beta 1
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Pathway
hcg04510
Focal adhesion
hcg04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
128326322 (LAMB1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
128326322 (LAMB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
ATG17_like
LAMB1
F5_F8_type_C
DUF7557
BNR_6
Motif
Other DBs
NCBI-GeneID:
128326322
NCBI-ProteinID:
XP_053108931
LinkDB
All DBs
Position
5:complement(153302304..153420714)
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AA seq
1791 aa
AA seq
DB search
MGVLQVHFCCLLGVWATVIAVWATVIAQEPEYSYGCAEGSCYPATGDLLIGRDSQLSVTS
TCGLQKPEPYCIVSHLQDDKKCFICDSRDPFHDTLNLDSHRIENVITTFAPNRLKLWWQS
ENGLENVTIQLDLEAEFHFTHLIMTFKTFRPSAMLIERSSDFGKTWRVYRYFAYDCENSF
PGVSTGPMKKVDDIICDSRYSDIEPSTEGEVIYRALDPAFRIEDPYSPKIQNLLKITNLR
IKFIKLHTLGDNLLDSRMEIREKYYYAVYDMVVRGNCFCYGHASECAPVDGFSEEVEGMV
HGHCMCRHNTKGLNCERCLDFYHDLPWRPAEGRQSNACKKCNCNEHSVQCHFDMAVFMAT
GNTSGGVCDDCQHNTVGRNCEQCKPFYFQHPERDIRDPHICEPCNCDPIGSQNGGICDRY
TDFSTGLIAGQCRCKLFVEGERCDSCKEGFYGLSEDNPRGCQSCACNPLGTIPGGNPCDS
ETGNCYCKRLVTGRQCDQCLPEHWGLSNDMDGCRPCDCDQGGALNNNCSSESGQCQCRPH
MIGRQCNEVEPGYFFIALDHYVYEAEEALFGPGVSIIERQYTQDRIPSWTGIGFVRVPEG
AYLEFYIDNIPYSMEYDVLIRYEPQLPDQWEKAVITVYRPGKIPASSRCGNTVPDDDDQE
VSLSPGSRYVVLPRPICFEKGLNYTVRLELPQYSYNTEVENPYTLIDSLVLMPFCKSLDI
FTVGGRGDDVMTNSAWETFQRYRCLENSRSVVKTPMTDVCRNIIFSISALLHETALSCQC
DPQGSLSSVCDANGGQCQCRPNVVGRRCDKCAPGTFGFGPSGCKSCECHIQASVNAFCHP
ETGQCQCFHGIYGRPCDRCLPGYWGFPSCQPCQCNGHADDCDPYSGQCLNCRDYTSGHNC
ERCLSGYYGDPVLGSGDHCRPCPCPDGPESGRQFASGCYQDRITLQVVCVCETGYRGSRC
GECASGFFGNPEDVGGICQPCQCNNNIDLTDPEACHKKTGLCLKCLYHTEGENCQLCKHG
YYGQALQQDCRKCVCNYLGTVRDHCNSSEDCECEKETGQCQCLPNVIGQNCDHCAPNTWR
LAGGTGCESCGCDVERSFGSSCNEFTGQCQCMPGFGGRTCNECQEFFWGDPSVDCQACAC
DLRGIQTPQCNRTTGQCICNEGIEGLRCDKCTRGYSGTFPDCAPCHQCFALWDVIISELT
NRTQRFLEKANALKITGVSGPYQQTLRSVEEKLNEIKRIIAQNPAAEPLKNIGNLFDEAE
KLKADVTEKIAEIEENVSKVAAEHNDTDTRLNALEADAESLDNVVKELAEQLEFIKISDV
RGALDSITKYFQMSLDAEKRANASTLLPGSVVEQSAEMRLEVESLINETEAKFKAKQEEQ
SRLLDELAGKLQSLDLSEVAEKTCGAPPGASCADSECGGLGCRTEDGKKKCGGPGCDGLV
TVAHNAWQKAMDFDRDILGALAEVEQLSKMVSEAKQRADEAKQNAQEVLLKTNATKEQVD
RSNKDLRNLIKQIREFLMKDSADLDSIEAVANEVLNMEMPSTPEQLQTLADNIRDRVESL
SDVETVLQQSAGDIARAKMLLDEAKKASKSATDVKVTADMVKEALEEAEKAQNAAEKAIK
LADKDIQGTQDLLTSIESETAVSEETLNNATLRIAELEKNVERLKQKAATNTEDITAAEE
TIATVNQTTETVKKVLDNDVSGKYKTLENLIAKKTGESADARKKAEALQNEAKALLDQAN
NKLQLLKELENTYEKNQRVLEDKAKQLVQLEETVRSLLQAISQKAAVYSTC
NT seq
5376 nt
NT seq
+upstream
nt +downstream
nt
atgggggttctccaggtgcatttttgctgtctcctaggtgtctgggctactgtaatagct
gtctgggccactgtaatagctcaggaaccagaatacagctatggatgtgctgaggggagc
tgctatccagccacaggagacttgctgattggccgagactcccagctctctgtcacctcc
acatgtggcttgcaaaagcctgaaccatactgcattgtgagccacctgcaggatgacaaa
aagtgtttcatttgtgattcccgggacccattccatgatacattaaacctagatagccat
cgtattgaaaatgtcatcactacctttgctccaaatcgtctcaagctgtggtggcagtca
gaaaatgggttagaaaatgtaaccatccagctggatctagaagctgaattccatttcact
catctcattatgaccttcaagacatttcgcccatctgcaatgttgattgaaagatcctcg
gattttgggaaaacttggcgagtatataggtactttgcctatgattgtgagaactctttc
ccaggtgtttcaactggacctatgaagaaagtagatgacattatttgtgattcccgatat
tctgatattgaaccttcaactgagggagaggtaatttatcgtgctctagatcctgctttt
agaatagaggacccatatagcccaaagattcagaatttgttaaagatcacaaatttaaga
atcaaatttatcaaactgcacaccctgggagacaaccttctggattctagaatggaaatc
agagaaaaatattactatgctgtttatgacatggttgttcgtgggaactgcttctgttat
gggcatgccagtgagtgtgcaccagttgatggattcagtgaagaagtggaaggaatggtc
catggtcactgtatgtgcagacacaacaccaagggcttaaactgtgagcggtgcttggac
ttttaccatgatttgccctggcgacctgctgaaggacgccagagtaatgcctgcaaaaaa
tgcaattgcaacgaacattctgtacaatgccattttgacatggctgtgttcatggcaact
ggaaataccagtggtggagtgtgtgacgactgtcagcacaatacagtggggcgtaactgt
gagcagtgcaaacccttctacttccagcatccagagagagacattagagatcctcacatt
tgtgagccatgtaattgtgacccgattggctcccaaaatgggggaatctgtgatcgctac
actgacttctcaactggccttattgctggacagtgccgttgtaaattatttgtggaaggg
gagcgctgtgattcctgcaaagaaggattctatggattaagcgaagataatcctcgtggt
tgtcagtcttgtgcatgtaatcccttgggcacaattcctggagggaatccttgtgactct
gagacaggaaattgctattgtaaacgtcttgttacaggaaggcaatgtgatcagtgtctg
cctgaacactggggattgagcaatgatatggatggatgtcgaccatgtgattgtgaccaa
ggaggagcactgaacaataactgctcaagtgaatctggtcaatgccagtgtagacctcat
atgattgggcgccagtgcaatgaagtggaaccaggttatttcttcattgctttagatcat
tatgtctatgaggcagaggaagccctctttggtcctggagtgagcataattgagcgtcag
tatactcaggatcgtataccttcatggactggaattggatttgtgagagttcctgaaggg
gcatacctggaattctatatagacaatataccatattctatggagtatgatgttcttatt
cgctatgaaccacagttaccagatcaatgggagaaagctgttatcactgtatatcgccca
ggcaagattcctgccagcagcagatgtggcaatacagttcctgatgatgatgatcaggaa
gtatcattatctccaggttcaagatatgtagttcttccacgtccaatttgctttgaaaag
ggactgaattatactgttcgtctggagctgccacaatactcatacaatacagaggtagaa
aatccatacacgctcattgattcacttgttcttatgcctttttgcaaatcactggacata
ttcacagttggaggcagaggtgacgatgtgatgactaacagtgcctgggaaacctttcaa
agatatcggtgcctggagaacagcaggagtgttgttaaaacacctatgactgacgtttgc
aggaatattatttttagcatttcagctctattgcatgagacagcattgtcctgccagtgt
gacccgcagggctcattaagttctgtgtgtgatgctaatggaggtcaatgtcaatgtcgg
ccaaatgttgttggaagaagatgtgacaaatgcgctcctggcacttttggatttggacct
agtggatgcaaatcttgtgagtgtcacattcaagcttctgtcaacgccttctgccacccg
gagactggtcagtgccaatgtttccatggaatatatggccgtccgtgtgacagatgctta
cctggctattggggatttccaagctgccaaccttgccagtgcaatggccatgcggatgat
tgcgacccatatagtggacagtgtttgaactgccgtgattacacctctggtcacaactgt
gaaagatgccttagtggttattatggagatcctgtcctgggatctggagatcactgccga
ccttgtccttgtccggatggaccagaaagtggccgccagtttgccagtggctgttatcaa
gaccgtattacattgcaagtggtgtgcgtctgtgagacaggatatagagggagcagatgt
ggtgaatgtgcttctggtttctttgggaatcctgaagatgttggtgggatttgccagccc
tgccagtgtaacaacaacattgacttaactgatccagaggcctgtcacaagaagacagga
ttgtgcctgaagtgcttatatcacacggagggtgaaaactgccaactgtgtaaacatggg
tattatggacaggctctacagcaggactgtagaaagtgtgtatgcaattacttgggaaca
gtacgtgaccactgcaacagctcagaagattgtgagtgtgagaaagaaactggtcagtgc
caatgtcttcctaatgtgattggacagaactgcgaccactgtgccccaaatacatggagg
ttggccggtggaactgggtgtgagtcatgtggctgtgatgttgaacgctcctttggctca
tcatgtaatgagtttactgggcagtgccagtgcatgccaggcttcggaggacgcacgtgt
aatgaatgtcaggagtttttctggggtgatcccagtgtggactgtcaagcttgtgcttgt
gatcttcgtggcattcagaccccacagtgcaaccgcacaactgggcaatgcatctgtaat
gaggggatagagggactccgttgtgataagtgtacccgaggttactccggcaccttccca
gactgtgcaccttgtcaccagtgttttgctctctgggatgtcatcataagtgagctgact
aataggacacagaggttcctggagaaagcaaatgccctgaaaatcacaggggtcagtggt
ccttaccagcagacactccgctctgtagaggaaaaactgaatgagattaaacgtatcatt
gctcaaaatccagctgctgagcctcttaaaaatattggaaatctctttgacgaagcagag
aagctaaaagcagatgttacagagaagatagccgaaatagaagaaaatgtatccaaagtg
gccgcagaacataatgacacagacactcgactgaatgccctggaggcagatgcagagagc
ctagacaatgttgtcaaagaacttgcagaacaactggagttcataaaaatctctgatgtt
cggggagccttggacagcatcaccaaatatttccaaatgtctttggatgcagaaaagaga
gccaatgcatctactctgcttcctggcagtgtagtagagcagtctgctgaaatgcgcctg
gaagtggaaagtttaatcaatgagacagaggcgaagttcaaggctaagcaagaggagcag
tcgcgtctcttggatgaacttgcaggcaaactgcaaagtctggatctttcagaagtggct
gagaagacatgtggagctccccctggggcttcctgtgctgattcagaatgtgggggcctg
ggctgcagaaccgaagatggaaaaaagaaatgtgggggcccaggctgtgatgggttagtt
actgtggcccacaatgcctggcaaaaagctatggatttcgacagagacatacttggtgct
ttggcagaagttgaacagctctccaaaatggtctcagaagcaaaacagagagcagatgaa
gcaaaacagaatgctcaagaagttctgctaaaaacgaatgccacaaaggagcaagtggac
aggagcaacaaagatctgaggaaccttattaaacagatcagagaatttctgatgaaagac
agtgctgatctggatagcatcgaggctgttgctaatgaagtgctcaacatggagatgccc
agcacacctgagcagctacaaacactagcagacaatatccgtgatcgggtggagagcctt
tctgatgttgaaactgtcttacagcagagtgctggagatattgcaagggcaaagatgctg
ttagatgaagctaaaaaagcaagtaaaagtgcaacagatgttaaagtcactgcagacatg
gtgaaagaggctctggaagaagctgaaaaagcccaaaatgcagctgaaaaggccatcaaa
ctggcagataaagatatccaaggaacacaagacctgcttacatctattgaatctgaaact
gcagtgtcagaagaaacactcaacaatgctactttgcgtattgctgaactagaaaaaaac
gtggaaaggcttaaacaaaaggctgctacaaacactgaagacattacagcagctgaagaa
actattgctactgtgaatcaaactactgagacagttaaaaaagtactagacaatgatgtg
agtggcaagtataaaactttagaaaacttaattgccaaaaaaacaggagagtctgcagat
gccaggaaaaaagcagaagcactacagaatgaagctaaagcactcttggaccaagcaaac
aacaaactccagctgctcaaggaattggaaaacacctacgagaagaaccaaagagtcctg
gaagacaaagccaaacaattggtgcaactggaagaaacagtccgcagcctcttgcaggca
atcagccagaaagctgcagtctacagcacctgctag
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