Hemicordylus capensis (graceful crag lizard): 128326338
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Entry
128326338 CDS
T08891
Symbol
PCDH7
Name
(RefSeq) protocadherin-7 isoform X1
KO
K16498
protocadherin delta 1
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Pathway
hcg03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
128326338 (PCDH7)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
hcg01009
]
128326338 (PCDH7)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hcg04515
]
128326338 (PCDH7)
Protein phosphatases and associated proteins [BR:
hcg01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
128326338 (PCDH7)
Cell adhesion molecules [BR:
hcg04515
]
Cadherins
Protocadherins
128326338 (PCDH7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
Mid2
TMEM154
KIAA1549
Motif
Other DBs
NCBI-GeneID:
128326338
NCBI-ProteinID:
XP_053108981
LinkDB
All DBs
Position
5:complement(108863358..109420572)
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AA seq
1308 aa
AA seq
DB search
MWKMRTLLGFVQSCYCCCCFLLLLPPPLWVSLATAKQLLRYRLAEEGPADIRIGNVASDL
GIVTGSGEVTFSLESGSDYLKIDNMTGELSTTERRIDREKLPQCQMIFDENECFLDFEVS
VIGPSQSWVDLFEGRVIILDINDNTPTFPSPVLTLTVEENRPVGTLYLLPTATDRDFGRN
GIERYELLQEPGIDGGRRGGGSSASAASDSALYPGGSKRRQEADGAARSSVFELQVADTP
DGEKQPQLIIKGALDREQRDSYELSLRVRDGGDPARSSQAILRVLITDVNDNSPRFEKSV
YEADLAENSSPGTPILQLRAADSDVGVNGQIEYVFGAATESVRRLLRLDESSGWLSVLHR
IDREEVNQLRFTVMARDRGQPPKTDKATVVLNIRDENDNVPTIDIRKIGRIPLRDGVASV
AEDVLVDTPIALVQVSDRDQGENGVVTCTVVGDVPFQLKPASEGEGEPQNKRKYFLHTSA
PLDYEAVRDYNVVIVAVDSGSPSLSSNNSLLVRVGDTNDNPPVFSQAVLEVSFPENNAPG
ERVATVMATDADSGKNAEIAYSLEPSPLSAESPGGLFIIDPDSGDVRVQAVLDREQRDTY
EFQVTARDKGVPSLQGSTTVVVKVADRNDNEPRFMQDVFTFYVKENLQPNSPVGMVTVMD
ADKGRNAELSLSIQPGEQEHGAAAGIFSIENDTGTIYSTVSFDRELQTSYTFRVKAVDGG
EPPRSATATVSLFVMDENDNAPQVTSPANSSYQVLSPSSNLRTVVTSVQAKDADENQNAE
LSYSLVGGNPFKLFEIDPSSGVVSLVGKLAPKHYGLHRLVVQVNDSGQPPQSTTALLHIF
VNESVSNATVVEGQVTRSLHTPLAQDIAGDPSYELSKQRLSIVIGVVAGIMTVILLILVV
VMARYCRSKGKHGGYEAGKKDHEDFFTPQQHDKAKKPKKDKKGKKPGKQPLYSSIVTVEA
SKPNGQRYDGVNEKLSGDSPSMSCYRSVNGGPGSPDLARHYKSSSPLPTVQLHPQSPTAG
KKHQAVQELPPANTFVGAGDNISIGSDHCSEYSCQASSKYSKQDVSESLNASSSNSSTQD
TSDKPFRRVTFSVVSQPQDPHQGSLQSCYDSGLEESETPSSKSSSGPRLGALPLPEDNYE
RTTPDGSVGEAEHMENGKNWPLPIKVSMWSALIHHRKRLIRPDSRPLPDVALTGKCTREC
DEYGHSDSCWMPVRTSPERKQKNQPKLSTFMPVDERGSQEKLANGEASLMGDRNRNLLNK
KLTSSYETFSAASFSKSEEANPEDIPLTQTGEYKPSPVNTLTRREVYL
NT seq
3927 nt
NT seq
+upstream
nt +downstream
nt
atgtggaagatgcggacgctcttgggctttgtgcagtcctgctactgctgctgctgtttc
ttactcttgctgcctcctccgctttgggtcagcctggccaccgctaagcagctgctgaga
taccggctggcagaggaaggacccgccgacatccgcatcggcaacgtggcttcggacttg
ggcatagtgacgggttcgggcgaagtgacgttcagcctggagtccggctccgattacctg
aagatcgacaacatgaccggcgagctgagcaccaccgagaggcgcatcgaccgcgagaag
ctgccgcaatgccaaatgatcttcgacgagaacgagtgcttcttggacttcgaggtgtcg
gtgatcggtccctctcagagctgggtggacctctttgagggccgggtcatcatcctggat
atcaacgacaatacccccacgttcccctcccccgtgctcaccctcaccgtcgaggagaac
cgtccggtgggaaccctctacctgctgcccaccgccaccgacagggactttggccgcaac
ggcatagagcgctatgaactgctgcaggaacccggcatcgacgggggcaggaggggcggt
ggcagctcggcttccgcagcttcggacagcgccctctatcctggaggcagcaagaggagg
caggaggccgacggcgcggccaggagcagcgtgtttgagctacaagtggctgataccccc
gacggggagaagcagccacagctgatcattaagggggctctggatcgagagcagagggac
tcctacgagttgagcttgcgggtgcgggacgggggagacccggcgcgctcctcccaggcc
atcctccgggtgctgatcaccgacgtaaatgacaacagcccccgcttcgagaagagcgtc
tatgaggcagatctggccgagaacagcagcccgggcaccccgatcctgcagctcagggct
gctgactccgacgtgggggtgaatgggcagattgagtacgtcttcggggcggccacggag
tctgtgaggcggctgctgcgcctggacgagtcctccggctggctcagcgtcctgcaccgc
atcgatcgcgaggaggtgaaccagctccgcttcaccgtcatggccagggaccgcgggcag
ccgcccaagaccgacaaggccacggtggtgctcaatatccgcgacgagaacgacaacgtg
cccaccatcgacatccgcaagatcgggcgcatcccgctgcgagacggggtggccagtgtg
gctgaagacgtgctggtggacacccccatcgccctggtgcaagtgtcagaccgggaccag
ggcgagaacggcgtggtgacttgcaccgtggtgggcgacgtgcctttccagctgaagccg
gccagcgagggtgaaggggagccccagaacaagcgcaagtatttcctgcacacctcggcg
cccctcgactacgaggccgtgcgagactacaacgtggtcatcgtggcggtggactctggc
agccccagcctgtccagcaacaactccctgctggtgcgggtgggcgacaccaatgacaac
ccgcccgtcttcagccaggctgtgctggaggtctccttccccgagaacaacgctcctggc
gagcgggtggccacagtgatggccacggacgcggacagcggcaagaacgccgagatcgcc
tactccctggagccgtccccgctctcggcagagtcccccgggggcctcttcatcatcgac
ccggattccggggacgtgcgggtgcaggcggtgctggaccgcgagcaaagggacacctac
gagttccaggtgacggcgcgggacaagggggtgccgtccctgcagggctccaccacggtg
gtggtgaaggtggccgaccgcaacgacaacgagccgcgcttcatgcaggacgtcttcacc
ttctacgtgaaggagaacctgcagcccaacagccccgtgggcatggtgacggtgatggac
gccgacaaggggcgcaacgccgagctgagcctctccatccagcccggcgagcaggagcac
ggcgccgccgccggcatcttctccatcgagaacgacaccggcaccatctactccaccgtc
tccttcgaccgggagctgcagaccagctacaccttcagggtgaaggcggtggacggcggc
gagccgccgcgctcggccaccgccaccgtctcgctcttcgtcatggacgagaacgacaac
gcgccgcaggtcacctcgccggccaacagctcctaccaggtgctgtcgccgtcgagcaac
ctgcgcacggtggtgaccagcgtgcaggccaaggacgccgacgagaaccagaacgccgag
ctgagctacagcctggtgggcggcaaccccttcaagctcttcgagatcgacccgtccagc
ggggtggtgtcgctggtgggcaagctggcgcccaagcactacggcctccaccgcctggtg
gtgcaggtcaacgacagcgggcagccgccgcagtccaccacggccctgctgcacatcttc
gtcaacgagagcgtctccaacgccaccgtggtggagggccaagtgacgcgcagcctgcac
acgccgctggcccaggacatcgccggggaccccagctacgagctgagcaagcagcgcctc
agcatcgtcatcggcgtggtggccggcatcatgaccgtcatcctcctcatcctggtggtg
gtcatggcccgttactgccgctccaagggcaagcacggcggctacgaggccggcaagaag
gaccacgaggacttcttcacgccccagcagcacgacaaggccaagaagcccaagaaggac
aagaagggcaagaagcccggcaagcagcccctctacagcagcatcgtcaccgttgaggcc
tccaagcccaacgggcagcgctacgacggcgtcaacgagaagctttccggagacagcccc
agcatgagctgctaccgctcggtcaacggcgggccgggcagcccggatctggcccggcat
tacaaatccagctctcccttgcccaccgtgcagctccacccgcagtcccccaccgccggg
aaaaagcaccaggccgtgcaggaactgcccccggccaacaccttcgtgggcgcgggagac
aacatctccatcgggtcggaccactgttccgagtacagctgtcaagccagcagcaagtac
agcaagcaggatgtgtctgaaagcttgaatgcatcttccagcaacagcagcactcaggac
acaagcgataagccattccgtagagtgacgttttcagttgtgagtcagcctcaggaccca
catcaagggtcattgcagagttgctatgacagcggtctggaggagtcagaaacaccaagc
agtaagagttcttcagggccgaggctgggtgcccttccactcccagaggacaactacgaa
aggactacgccggatggcagtgttggtgaggcagagcatatggaaaatgggaaaaattgg
cctctgccgataaaggtgtccatgtggagtgctctcatccaccacaggaagaggctcatc
aggccagattcaagacctttgccagatgtagccctgactggaaagtgcactcgggaatgt
gatgagtatggccattcggactcctgctggatgcctgtccgcacttcacctgaaaggaag
caaaagaatcagccaaaactttccacttttatgcctgttgatgaacggggcagtcaagag
aagctggccaatggtgaagcctccctcatgggtgaccgcaacagaaacctccttaacaaa
aagttgacctcatcctatgagaccttcagtgcagctagtttcagcaaaagtgaggaagcc
aatccagaggatattcccctcacacagacaggggaatacaagccatctcctgtcaatact
ttaactagaagagaagtttacctttag
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