Hemicordylus capensis (graceful crag lizard): 128326554
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Entry
128326554 CDS
T08891
Symbol
COL25A1
Name
(RefSeq) collagen alpha-1(XXV) chain isoform X1
KO
K24356
collagen type XXV alpha
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
hcg00536
]
128326554 (COL25A1)
Glycosaminoglycan binding proteins [BR:
hcg00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
128326554 (COL25A1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
128326554
NCBI-ProteinID:
XP_053109569
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Position
5:complement(36915131..37403060)
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AA seq
576 aa
AA seq
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MVFPKINHGFLSADQQLIKRRLIKGDQGQAGPPGPPGPPGPRGPPGDTGKDGPRGMPGVP
GEPGKPGEQGLLGPQGPPGQKGLLGAPGVPGMDGQQVLWLLGIFGWPVRPFGRTVHLCSS
TMDVAWPLHVLNTSIQKKPSWVNPVQWEREASLDLRVILDSREKRAILEKVDPKVMQEKR
VTLDLLLQELRENRENRVDQDKRESQDCRDCLDYLGLRVNQVSLVHRENRDCQDCQEQRV
KGEKLGLLGKVNEVNLEFQGQREGQANLELEAPKGRRSVGDPGDKGDLGAIGPRGPPGQK
GDQGATEIIDYNGNIHEALQRITTLTVTGPPGPPGPQGLQGPKGESGSPGLPGVDGEQGP
KGSKGDMGDPGIPGEKGGIGLPGLPGSNGMKGEKGDVGLPGPQGPSILGPPGPPGPHGPP
GPMGPHGLPGPKGEPGLNGLKGLKGEAGHKGDRGPLGLPGASGLDGKPGPRGMDGPLGPH
GLAGPKGDRGEKGVTGDPGPRGPYGLPGKDGEPGLDGFPGPRGEKGDVGEKGEKGEKGKK
GKKGPKGEKGEQGAPGLDAPCPLGPDGLPMPGCWQK
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atggtgtttcctaaaatcaatcatgggtttctctctgctgatcagcagctcattaaacgc
cgcctcattaagggtgaccaaggacaagctggaccccctgggcctcctgggcctccaggt
ccaaggggtcctcctggagatactggcaaagatggcccccgaggaatgcctggtgtaccg
ggagaaccaggaaagccgggtgaacaaggcttgctgggacctcaggggcctccaggacaa
aagggcttacttggtgcacctggtgttccaggaatggatggtcaacaggtgctgtggctg
ttgggcatcttcggttggcctgtgcgacccttcggccgaactgtgcacctgtgtagttcg
actatggacgttgcatggccgttgcatgttctcaacaccagcatccagaaaaagccttca
tgggtgaacccggtgcaatgggagagagaggcgtccctggacttaagggtgatcctggac
agcagggagaaaagggcgatattggagaaagtggacccaaaggtgatgcaggagaaaagg
gtgaccctggatcttctgctgcaggaattaagggagaaccgggagaatcgggtcgaccag
gacaaaagggagagccaggactgccgggactgcctggattacctgggattaagggtgaac
caggtttcattggtccacagggagaaccgggattgccaggattgccaggaacaaagggtg
aaaggggagaagctgggcctcctgggaaaggtgaacgaggtgaacctggagttccagggc
caaagggaaggtcaggcgaatctggaactagaggccccaaagggtcgaaggtcagtaggc
gatcctggagacaaaggtgacttgggggcaataggtccaaggggcccacctggacaaaaa
ggtgatcaaggtgccacagagatcattgactacaatggcaatattcatgaagctttgcag
aggattaccaccctaactgtcacgggtcctccaggcccacctggaccccaaggattgcaa
ggaccaaagggtgaatctggatcgccaggattaccaggtgtcgatggagagcaggggcct
aaaggctcaaagggggatatgggtgaccctggaataccaggagaaaaaggtggaattgga
cttccaggattgccaggatccaatggcatgaagggtgaaaaaggagatgttggcttgcca
ggtcctcaaggtccctctattttaggaccacctggacctcccggcccacatggtccacca
gggcctatgggacctcatggactaccaggcccaaagggtgaaccagggttaaatggtctt
aaaggattgaagggtgaagcaggtcacaagggtgacagagggccccttggtcttccagga
gcatctggcttagacggaaagccaggaccccggggtatggatggcccacttggtccacat
ggccttgcaggtcccaaaggagacagaggtgaaaagggagttacaggagatcctgggccc
aggggaccatatggcttgcctggcaaagatggcgaacctggccttgatggtttccctggt
cctcgcggagaaaagggtgatgtaggagaaaagggagaaaagggggaaaagggaaagaaa
ggcaaaaaggggcctaaaggggagaaaggagaacagggtgcccccggattagatgcacct
tgcccattggggccagatggattaccaatgccaggctgttggcaaaagtga
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