Hemicordylus capensis (graceful crag lizard): 128326580
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Entry
128326580 CDS
T08891
Symbol
LIMCH1
Name
(RefSeq) LIM and calponin homology domains-containing protein 1 isoform X1
KO
K24422
LIM and calponin homology domains-containing protein 1
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
hcg04990
]
128326580 (LIMCH1)
Domain-containing proteins not elsewhere classified [BR:
hcg04990
]
LIM domain-containing proteins
Other lim domain-containing proteins
128326580 (LIMCH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4757
CH
LIM
Motif
Other DBs
NCBI-GeneID:
128326580
NCBI-ProteinID:
XP_053109644
LinkDB
All DBs
Position
5:complement(102381584..102654600)
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AA seq
1792 aa
AA seq
DB search
MASPGLELVEGPAQPLQDSPQPEPAFAEAQKWIEQVTGRNFGGKDFRSGLENGVLLCELL
NSIKPGLVKKINRLPTPIAGLDNIALFLRGCKELGLKESQLFDPGDLQDTSSRATVKNPD
CSRKLKNILVTIYWLGKTANSSTYYSGATLKLKEFEGLLTQMRKETEDVESPKRSIRDSG
YVDCWDSERSDSLSPPRHGRDDSFDSLDSFGSRSQQTPSPDVVLRGSSDGRGSDSESDLP
HRKLPDVKKDDMSARRTSYGEPKSVVPFNQYLPNKSNQTAYIPAPLRKKRAEREEFRKSW
STATSPIGGERPFSKSHPETIEEEQSEAPMQSEVDPLALGVSAAKPSVKPVEMDTSQKDP
LHQSPTFSAKKPAGLGNNEKNPKELRKLRRLEQAGIKVMPATQRYGSRSAPHCGVYTACV
TFLTFAGLCFMSLPVTHHKHMGEMSEPSPDIILRKENPFMQKDSGSEDERENRIPDLEKD
DFAVRRAKLNQPKLTLPFNQYLLGSYTNNDRRKMEEGSKRRKKQECTSGNKVHMASTRQT
ALCEEKPFLQSQEDESEEKEQANVPDIHRDDLAKRKTQASPSQLDFPIFMRASITQADKE
LWDRLKVSGKTSDEELADTQDSFPPSEVAVESASHNYFASHKARMHKKTSPKQRFVHFGP
VTEIDHQKLEKLSTSRAVTKDEMEEISSREGVKALKSLSETSFEFSVSCIKSTGHAEEAL
KPHANSSEIILSNMDVYTSSPLEACIDSQKQMPSSLSKWHESSDEDLDDSFPDIERDDML
ARRFGNFQRSTSPVCTYPPSLSVVSHSPLKQQGNFVVYGDWKTPQKSERSSLLPFAMQHC
HATPSLVSISSVVTYEDGLGKSEDQEEHTNDTTGDTMGFRNPGKDDMMVRRTGAFLKQTG
PSVRQFLPVPFSKQQNGEEATKELIKTEQKVKSVIMTDTVVSEKRPKLCAEIPQRLTVQP
EHEEEQDIPETLYSMQEYVSSDAHENMAHPEAIQPSNSSKMQEVMERNGRECTSLEDEHI
QIFGSRTPVSDDAESMSMFDMRCTDETAVIQPHSKARHEKLQTIHHQLKEDEDRWQDDLA
RWKSRRRSASQDLLKKEAERKKMERLLTGADGTSERRKSIKTYREIVEEKERREKELHEA
YKNARSREEAESILQQYIERFTISEAVLERLEMPKILERSHSAEPNSSSPPKDPNPLRYL
RQQSLPVPKYTAKVEATIAPASGSEASISTGRTSPSKPFVSKAVPMLTPKPYSQPKNTQQ
VLKTFKVDGKISMNGETFNGVEEEQDRECTTFIFAPSPSRSPKPDTVVEVDGTLVEGKQD
STSTELVLKRLIEHSKHREQTGSVTEETKNTNQKDNIDSERASPDHKEFSTMVSCASPTV
VSVEFPSLTNHSKEIGSNDEPKKPETGQQKDAEAPVMQKAVTLETPEQDGGIAFPFLKKI
PEANQVVLQNSVPQADSENSDKSNRFGCWSWDPEEERKRQERWQHEQERLLQERYQKEQD
KLKEEWEKAQKEVEEEERRYYEEERKIIEDTVVPFTVTSSSAEPLSTSSSVTDGNGTVNA
IDMSNSEEEEKQKEGRTLKKLFCEQDGASFLKNKEYEQWKENVSAVNKVAYLETSNQRGN
EQDQQTSTPECMSSTGMTLPLCQEMLQNQQLLTKQSPHAPDTRQKNLPLEDHLGLPIKST
REHRRAGCQENFRTGPPSPCSPTIPSQSLNRYKRSISGKKLCSSCGHPLGKGAAMIIETL
GLYFHIQCFRCGICKGQLGDAASGTDVRIRNGLLNCNDCYIRSRTAGQPTTL
NT seq
5379 nt
NT seq
+upstream
nt +downstream
nt
atggccagtcctggcttagagctcgtggaggggccggcccagcctctgcaagactccccc
cagcctgagccagcttttgccgaagctcagaagtggattgagcaagtaacagggagaaac
tttggtggcaaagattttcgatccggattagaaaatggagttctgttgtgtgagttgctg
aattctataaagcctggattggtcaaaaagatcaatagactgccaactcccattgctgga
ttggacaacattgccttgttcttaagaggctgcaaggaacttgggctaaaagaatctcag
ctttttgacccaggagacctgcaggatacttcaagcagagcaacagtgaagaatcctgac
tgtagcaggaagctgaaaaatattttagtcactatctattggttgggaaaaacagcaaac
agcagcacttactacagtggagcaacactgaagctgaaggagtttgaaggactgctaacc
cagatgagaaaggagacagaagatgttgagagccccaagcgcagcatccgtgacagtggc
tacgtagactgctgggactcggaacgcagcgattctctttctcctcctcgccatggtaga
gatgattcttttgacagcctggattcctttggctcccgctcccaacaaaccccgtctcca
gatgtggtgctgagaggaagcagtgatgggagaggaagtgattctgaatccgatttgcca
catcgaaagttgccagacgtgaaaaaggacgatatgtctgcaagacggacctcctatggt
gaacccaaatcagttgtgcctttcaaccaatacctccccaataagagtaaccagactgcc
tatattccggctcctcttaggaagaagagagccgaacgagaggagttcaggaagagctgg
agtactgctacttctccaataggaggagagagacctttcagcaaaagccatcctgaaact
atagaagaagaacaaagtgaggcaccgatgcaatctgaagtggatcccttggccttggga
gtttctgctgcaaaaccctctgtgaagcctgttgagatggataccagtcagaaagaccct
ttacatcagtctcctacattttctgcaaaaaaaccagcaggtctcggaaataatgaaaag
aatcccaaggagctcagaaagctgagaaggcttgaacaggctggtattaaggtcatgcca
gcaacacaacgctatggcagcaggtcagccccacactgtggagtctacaccgcatgtgtc
acatttttaacatttgctgggctgtgttttatgtcacttcccgtaacacatcacaagcac
atgggtgaaatgagtgagcctagtccagacatcatccttcgcaaagagaacccctttatg
caaaaggattctggctctgaagatgaacgagaaaacagaattcctgacctagagaaggat
gactttgctgtacgcagagcaaaactaaatcaacccaaacttactttgccatttaaccaa
tacctacttggatcctatacaaacaacgatagacgtaaaatggaggaagggagcaaacgg
aggaaaaaacaggaatgtacaagtggaaacaaagtacatatggcttcaacaaggcaaacg
gcgttgtgtgaagagaaaccattcctgcagtctcaggaggatgaatctgaggagaaagaa
caagcaaatgttcctgatattcacagagatgacctggctaagcggaaaactcaggctagc
ccctcccaactagattttcctatttttatgagagcttctataacacaagcggataaggag
ctatgggaccgactcaaagtttcagggaagaccagtgatgaggaacttgcagacactcaa
gattcttttccaccctctgaagtggcagtggaatctgccagccataattattttgcaagc
cacaaagcaaggatgcacaagaagaccagccccaagcagaggtttgtgcactttgggcca
gtgacggaaattgaccatcagaaattggagaagctttccacttctagggctgtgactaaa
gatgaaatggaagaaatatccagtagggaaggagttaaggctcttaagagtttgagtgaa
acttcattcgaattctctgtgagctgtatcaagtccactggtcatgctgaggaagccctc
aagccccatgctaatagcagtgaaataatactgtccaatatggatgtgtatacttcctcc
cccttggaagcttgtattgattctcagaagcaaatgccaagcagtttgagcaaatggcat
gaaagtagcgacgaagacttggatgacagctttccagatattgagagagatgacatgttg
gctagaagatttggaaattttcagagatctactagtccagtttgcacatatccaccttcc
ctttcggtagtcagtcatagtccattgaagcagcaaggaaattttgttgtttatggagat
tggaagactccacagaaatcagaaagaagttcactactgccttttgccatgcaacattgt
catgcaacaccttcacttgtatccataagttctgttgtaacatatgaagatggccttggg
aagtcagaagatcaagaagagcacacgaatgatacaacaggagacacaatgggatttaga
aatccagggaaagatgatatgatggtgagaagaaccggagcttttctgaagcagaccgga
ccaagcgttaggcagttcctcccagttcctttctcgaagcagcagaatggtgaggaggca
actaaggagcttataaagactgaacagaaagtgaagagcgttattatgacagacacagta
gtatctgaaaaacgtccaaagctatgtgcagaaatccctcaaaggcttacagtgcaacct
gaacatgaagaggaacaagacataccagagacattgtattccatgcaagagtatgtctct
tctgatgctcatgagaatatggctcatcccgaagcaattcagccaagtaattcttctaag
atgcaagaagttatggaaagaaatggcagagaatgtacatcattagaagatgaacatata
caaatattcggctccagaactcctgtgtctgatgacgcagagagcatgagcatgtttgac
atgagatgcacagatgagactgctgtgatacagcctcacagcaaagctcgccatgaaaag
ttacagacgattcaccaccagctgaaagaggatgaagatcgatggcaggatgatttagct
cggtggaaaagtcgccggagaagtgcttcacaggatttattaaaaaaagaagctgaaaga
aagaagatggagcgattattgactggagctgatgggaccagtgagcgtaggaaaagcatc
aagacttacagagagattgtggaagagaaagagaggcgagagaaagagcttcatgaagca
tacaagaatgccaggtcgcgtgaggaggcagagagtattctccaacaatatattgagaga
ttcactattagtgaagctgtccttgaacgcttggagatgccaaaaattctggagagaagc
cattcagctgagccaaattcatcatccccaccgaaggacccgaatcctcttagatatcta
cggcaacaatcactccctgtccccaaatacactgccaaggtagaggcaaccattgctccc
gccagcggatcggaagccagcatttccacaggccgcacttctccaagcaaacctttcgtc
tccaaggctgtgcctatgctgacccccaagccttactcgcaacccaaaaacacccagcag
gttttgaaaacctttaaggtagatggaaaaatcagcatgaatggggaaaccttcaatgga
gtggaagaggagcaagacagagaatgtacaacgttcatatttgctccttcgccaagtcgt
tcaccaaagcctgacactgtggtggaagtggatggcaccttggtggaggggaagcaagac
tccactagcactgaactggttctgaagagacttatcgagcatagcaaacacagagagcag
accggctccgtgactgaagaaactaaaaacaccaaccaaaaagacaacattgattcagaa
agagcatctccagaccacaaagaattcagcacaatggtttcctgtgccagccctacagtg
gtcagtgtagagttcccctccctcactaatcattccaaggaaattggttcaaatgatgag
ccgaagaaacctgaaacagggcaacagaaggatgcagaagcaccagttatgcagaaggca
gtgaccttggaaacccctgagcaagatggaggcattgcatttccatttctgaagaagata
cctgaggcaaaccaagtagtcctgcagaattctgtcccacaagctgactctgagaacagt
gacaagtcaaaccgttttggttgctggtcttgggatccagaagaagaaagaaaaagacaa
gaacggtggcagcatgaacaggagcgcttacttcaggaaaggtatcagaaagagcaggac
aagttgaaagaagaatgggaaaaagcacaaaaagaagttgaagaggaggaacgtagatac
tatgaggaggaacgcaagatcattgaggatactgtggttccattcacagttacttcaagc
tctgcagaacccttgtccacctcttcctctgtgacagatggaaatgggactgtgaatgcg
atagatatgagcaactctgaagaggaggaaaagcagaaggaaggaagaacactgaagaaa
ttattttgtgagcaggatggtgcatccttcttgaaaaacaaggaatatgaacagtggaag
gaaaacgtgagcgctgtaaataaagtagcatatctagaaaccagtaatcagagaggaaat
gagcaagatcagcagacatccacaccagaatgcatgtcatccactggaatgactttgcca
ttgtgtcaggaaatgctacagaatcagcagttattaactaaacagagcccacatgctcca
gacaccagacagaaaaacttgccattagaagatcatttaggtctgccaatcaaatccaca
agagaacataggagggcaggttgtcaagagaacttcaggactgggccaccgtcaccatgc
tctcctacaattccaagccagtcactcaacaggtataaaaggtccatcagtggaaagaag
ctctgctctagctgtggacaccctcttgggaaaggagctgccatgatcatcgaaacactt
ggtctttatttccatatccagtgcttcaggtgtggaatttgtaaaggacagcttggagat
gcagcgagtggaacagatgtccggataagaaatggtcttctcaactgcaatgattgttac
atcagatccagaactgctggtcagccaacaacgttgtga
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integrated database retrieval system
