Hemicordylus capensis (graceful crag lizard): 128326698
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Entry
128326698 CDS
T08891
Symbol
SMARCA5
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Pathway
hcg03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
128326698 (SMARCA5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hcg03021
]
128326698 (SMARCA5)
03036 Chromosome and associated proteins [BR:
hcg03036
]
128326698 (SMARCA5)
Transcription machinery [BR:
hcg03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
128326698 (SMARCA5)
Chromosome and associated proteins [BR:
hcg03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
128326698 (SMARCA5)
RSF complex
128326698 (SMARCA5)
WICH complex
128326698 (SMARCA5)
B-WICH complex
128326698 (SMARCA5)
NORC complex
128326698 (SMARCA5)
BRF complex
128326698 (SMARCA5)
NuRF complex (fruit fly)
128326698 (SMARCA5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
HAND
Helicase_C
ResIII
DEAD
HDA2-3
Myb_DNA-binding
DBINO
Nop16
AAA_14
Motif
Other DBs
NCBI-GeneID:
128326698
NCBI-ProteinID:
XP_053110006
LinkDB
All DBs
Position
5:59662340..59716829
Genome browser
AA seq
1040 aa
AA seq
DB search
MSTAAGQETENGNSLAASALVPGTEDAGVAPAAAEGLPTGDAEEGTEMIDDESPGKQKEN
QEPDPTYEEKMQTDRANRFEYLLKQTELFAHFIQPAAQKTPTSPLKMKPGRPRIKKDEKQ
NLLSVGDYRHRRTEQEEDEELLTESSKTTNVCTRFEESPSYVKSGKLRDYQVRGLNWLIS
LYENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKSTLHNWMNEFKRWVP
TLRAVCLIGDKDQRAAFVRDVLLPGEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRI
KNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSADDFDSWFDTNN
CLGDQKLVERLHLVLRPFLLRRIKAEVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDID
ILNSAGKLDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDTHLVTNGGKMVVLDKLLP
KLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQASINAYNEPGSSKF
VFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTV
EERIVERAEMKLRLDSIVIQQGRLVDQNLNKLGKDEMLQMIRHGATHVFASKESEITDED
IDGILERGAKKTAEMNEKLSKMGESSLRNFTMDTESSVYNFEGEDYREKQKTAFTEWIEP
PKRERKANYAVDAYFREALRVSEPKAPKAPRPPKQPNVQDFQFFPPRLFELLEKEILYYR
KTIGYKVPRNPDLPNAAQAQKEEQLKIDEAEPLNEEELEEKEKLLTQGFTNWNKRDFNQF
IKANEKWGRDDIENIAREVEGKTPEEVIEYSAVFWERCNELQDIEKIMAQIERGEARIQR
RISIKKALDTKIGRYKAPFHQLRISYGTNKGKNYTEEEDRFLICMLHKLGFDKENVYDEL
RQCIRNSPQFRFDWFLKSRTAMELQRRCNTLITLIERENMELEEKEKAEKKKRGPKPSLA
QKRKLDGTPDGRGRKKKLKL
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atgtctactgcggcggggcaggagaccgagaatggaaactccctcgctgccagcgctctg
gttcccggcacggaggacgcgggggtggccccggcagccgcggaggggttgcccacagga
gacgccgaggagggcacggaaatgattgatgatgaatcaccaggaaagcaaaaagaaaac
caggaaccggatcctacatatgaagaaaaaatgcaaacagaccgagcgaacagatttgaa
tatttgttgaagcagacagaactgtttgctcatttcattcagcctgctgctcaaaagact
ccaacttcacctctgaaaatgaaaccaggacgaccacgaataaagaaggatgaaaaacaa
aatctgttatcagttggagattaccgccatcgtagaactgaacaagaagaagatgaggag
ctgttgacagaaagctcaaagaccacgaacgtatgcactcgatttgaagaatctccatca
tatgtaaaatcggggaaactgcgtgattatcaggtccgaggcctgaattggctcatttct
ttatatgaaaatggcattaatggcatattggcagatgaaatgggtctggggaaaacactg
caaacaatttctcttcttgggtatatgaaacactatagaaacatacctggtcctcatatg
gttttggttcccaaatcaactttacataattggatgaatgagttcaagagatgggtgcca
actcttcgagcagtatgtttgataggtgacaaggaccagagagctgcttttgtacgagat
gttttattgccaggtgaatgggatgtctgtgtaacatcatatgaaatgctgattaaagag
aaatctgtcttcaaaaaatttaattggagatatcttgttattgatgaagctcacaggatc
aaaaatgaaaaatcaaagttgtcagaaattgtgcgggaattcaagactacaaataggttg
ctgttaactggaacaccacttcagaacaatttacatgaactctgggcacttcttaacttc
ctattgccagatgtctttaattcagctgatgattttgattcatggtttgatacgaacaac
tgtcttggggatcaaaagctagtggaacggctccatttggtgctacggccatttctcttg
cgtcgtattaaagctgaggtagaaaagagtttgcctccaaaaaaggaagttaaaatatat
gttggtctcagcaaaatgcagagagaatggtacaccagaatcttaatgaaggacatagat
atattgaactctgctggaaaactggacaaaatgagattgctaaacattcttatgcaatta
cgaaaatgttgcaatcatccatacctctttgatggagcagaacctggcccaccttacaca
acagatacgcatttggttactaatggtggcaaaatggtggttttggacaaactcttgcca
aagctgaaggaacaaggatcgcgagtactgatcttcagccagatgaccagagtactagat
atcttagaagattactgcatgtggcgaaattatgaatattgtaggcttgatgggcagaca
cctcatgatgagagacaagcttctattaatgcatacaatgaacctggcagctcaaagttt
gtgttcatgttgagcacacgtgctggtggtctgggaatcaatctggctacagctgatgtc
gtaatcctgtacgattcggactggaatccacaagtagaccttcaagctatggatcgagca
cacagaattggtcaaacaaagactgttagagtattcagattcattacagacaacacagta
gaagaaagaatagtggaacgagcagagatgaaactccgcttggattctattgttattcaa
caaggaagactggtagatcaaaacctgaataaattagggaaagatgaaatgttgcagatg
attcggcatggagctacccatgtctttgcttcaaaagagagtgaaattacagatgaagat
attgatggcattttggaaagaggtgcaaagaagactgcagaaatgaatgagaaactctct
aaaatgggtgaaagctcactcagaaacttcacaatggacacagagtcaagcgtgtacaac
tttgaaggagaagattatagagagaagcaaaagacggcattcacagagtggattgaacca
ccaaagcgtgagagaaaagcaaactatgctgttgatgcttatttcagggaagctcttcgt
gttagtgaaccaaaagcaccaaaggctccacgacccccaaaacagcctaatgttcaggat
ttccagttctttccaccacgtttgtttgagttattggagaaagagattctttattatagg
aaaactattggatacaaggtgcctcgtaatcctgacctgccaaatgcagctcaggcacaa
aaggaggaacagcttaaaattgatgaagctgagcctctcaatgaggaagagttagaagaa
aaggaaaagttgctaactcaggggtttacaaactggaataagagagacttcaatcagttc
atcaaagctaatgaaaaatggggtcgtgatgatattgaaaatatagctcgggaagtagaa
ggaaaaactccagaggaagtcattgagtattctgctgtcttctgggagcggtgtaatgaa
cttcaggatatagagaagatcatggctcagattgaaagaggtgaagctcgaattcagagg
aggattagtattaaaaaagctcttgacacaaagattggcagatacaaagcaccttttcat
cagctgagaatatcatatggtactaacaaagggaaaaattatacagaagaagaagatcgg
tttttgatctgtatgcttcataagctaggatttgataaagaaaatgtttatgatgagttg
agacagtgtattcgcaattctccccaattcagatttgattggttcctcaagtccagaact
gcaatggagctgcagagaagatgcaataccttaatcactttgattgaaagagaaaacatg
gaattggaagaaaaggagaaagcagagaaaaagaagcgtggaccaaagccatctttggcc
cagaaacgtaaattggatggtactcctgacggcagaggacggaaaaagaaattaaagctg
tga
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integrated database retrieval system
